RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 SND1Q7KZF4 910 aaKnown RBP eCLIP7.01□□□□□ -1.29
CMSS1-207ENST00000494412 SH3BP2P78314 561 aa7□□□□□ -1.29
CMSS1-207ENST00000494412 FOXC1Q12948 553 aa7□□□□□ -1.29
CMSS1-207ENST00000494412 TRIM67Q6ZTA4 783 aa7□□□□□ -1.29
CMSS1-207ENST00000494412 FKBPLQ9UIM3 349 aa7□□□□□ -1.29
CMSS1-207ENST00000494412 USP17L3A6NCW0 530 aa6.99□□□□□ -1.29
CMSS1-207ENST00000494412 USP17L4A6NCW7 530 aa6.99□□□□□ -1.29
CMSS1-207ENST00000494412 TNFRSF10AO00220 468 aa6.99□□□□□ -1.29
CMSS1-207ENST00000494412 SKIP12755 728 aa6.99□□□□□ -1.29
CMSS1-207ENST00000494412 KANK4Q5T7N3 995 aaPredicted RBP6.99□□□□□ -1.29
CMSS1-207ENST00000494412 USP17L2Q6R6M4 530 aa6.99□□□□□ -1.29
CMSS1-207ENST00000494412 USP17L1Q7RTZ2 530 aa6.99□□□□□ -1.29
CMSS1-207ENST00000494412 PKD2L1Q9P0L9 805 aa6.99□□□□□ -1.29
CMSS1-207ENST00000494412 ZMIZ1Q9ULJ6 1067 aa6.99□□□□□ -1.29
CMSS1-207ENST00000494412 TMEM164Q5U3C3 297 aa6.98□□□□□ -1.29
CMSS1-207ENST00000494412 STK32AQ8WU08 396 aa6.98□□□□□ -1.29
CMSS1-207ENST00000494412 NOVA2Q9UNW9 492 aaKnown RBP6.98□□□□□ -1.29
CMSS1-207ENST00000494412 USP17L5A8MUK1 530 aa6.97□□□□□ -1.29
CMSS1-207ENST00000494412 E9PSI1 815 aa6.97□□□□□ -1.29
CMSS1-207ENST00000494412 GDF9O60383 454 aa6.97□□□□□ -1.29
CMSS1-207ENST00000494412 ELOAQ14241 798 aaKnown RBP6.97□□□□□ -1.29
CMSS1-207ENST00000494412 RC3H1Q5TC82 1133 aaKnown RBP6.97□□□□□ -1.29
CMSS1-207ENST00000494412 DEPDC4Q8N2C3 294 aa6.97□□□□□ -1.29
CMSS1-207ENST00000494412 ZNF511Q8NB15 262 aa6.97□□□□□ -1.29
CMSS1-207ENST00000494412 NFATC2IPQ8NCF5 419 aa6.97□□□□□ -1.29
CMSS1-207ENST00000494412 FOXJ1Q92949 421 aa6.97□□□□□ -1.29
CMSS1-207ENST00000494412 WNT7BP56706 349 aa6.96□□□□□ -1.3
CMSS1-207ENST00000494412 FAM174AQ8TBP5 190 aa6.96□□□□□ -1.3
CMSS1-207ENST00000494412 MRGPRX2Q96LB1 330 aa6.96□□□□□ -1.3
CMSS1-207ENST00000494412 PDZRN3Q9UPQ7 1066 aa6.96□□□□□ -1.3
CMSS1-207ENST00000494412 GNEQ9Y223 722 aaKnown RBP6.96□□□□□ -1.3
CMSS1-207ENST00000494412 ZC3H4Q9UPT8 1303 aaKnown RBP6.96□□□□□ -1.3
CMSS1-207ENST00000494412 GFRA3O60609 400 aa6.95□□□□□ -1.3
CMSS1-207ENST00000494412 C4orf48Q5BLP8 95 aa6.95□□□□□ -1.3
CMSS1-207ENST00000494412 PLEKHM2Q8IWE5 1019 aa6.95□□□□□ -1.3
CMSS1-207ENST00000494412 CCER1Q8TC90 406 aaPredicted RBP6.95□□□□□ -1.3
CMSS1-207ENST00000494412 USP17L15C9J2P7 530 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 USP17L10C9JJH3 530 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 USP17L13C9JLJ4 530 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 USP17L12C9JPN9 530 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 USP17L11C9JVI0 530 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 USP17L21D6R901 530 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 USP17L18D6R9N7 530 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 USP17L22D6RA61 530 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 USP17L17D6RBQ6 530 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 USP17L19D6RCP7 530 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 USP17L20D6RJB6 530 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 WNT7AO00755 349 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 USP17L24Q0WX57 530 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 AGERQ15109 404 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 SLFNL1Q499Z3 407 aa6.94□□□□□ -1.3
CMSS1-207ENST00000494412 IRX2Q9BZI1 471 aaPredicted RBP6.94□□□□□ -1.3
CMSS1-207ENST00000494412 MKRN1Q9UHC7 482 aaKnown RBP6.94□□□□□ -1.3
CMSS1-207ENST00000494412 FAM196BA6NMK8 535 aa6.93□□□□□ -1.3
CMSS1-207ENST00000494412 CRTC2Q53ET0 693 aaPredicted RBP6.93□□□□□ -1.3
CMSS1-207ENST00000494412 LARP1Q6PKG0 1096 aaKnown RBP6.93□□□□□ -1.3
CMSS1-207ENST00000494412 EHBP1Q8NDI1 1231 aa6.93□□□□□ -1.3
CMSS1-207ENST00000494412 ARMC2Q8NEN0 867 aa6.93□□□□□ -1.3
CMSS1-207ENST00000494412 AMOTL2Q9Y2J4 779 aa6.93□□□□□ -1.3
CMSS1-207ENST00000494412 PCDHB9Q9Y5E1 797 aa6.93□□□□□ -1.3
CMSS1-207ENST00000494412 RASA1P20936 1047 aa6.92□□□□□ -1.3
CMSS1-207ENST00000494412 PRR20EP86478 221 aa6.92□□□□□ -1.3
CMSS1-207ENST00000494412 PRR20CP86479 221 aa6.92□□□□□ -1.3
CMSS1-207ENST00000494412 PRR20DP86480 221 aa6.92□□□□□ -1.3
CMSS1-207ENST00000494412 PRR20BP86481 221 aa6.92□□□□□ -1.3
CMSS1-207ENST00000494412 PRR20AP86496 221 aa6.92□□□□□ -1.3
CMSS1-207ENST00000494412 NCOA4Q13772 614 aa6.92□□□□□ -1.3
CMSS1-207ENST00000494412 NBPF14Q5TI25 921 aa6.92□□□□□ -1.3
CMSS1-207ENST00000494412 SH3BP5LQ7L8J4 393 aa6.92□□□□□ -1.3
CMSS1-207ENST00000494412 RNF135Q8IUD6 432 aa6.92□□□□□ -1.3
CMSS1-207ENST00000494412 OCSTAMPQ9BR26 566 aa6.92□□□□□ -1.3
CMSS1-207ENST00000494412 CEP126Q9P2H0 1117 aa6.92□□□□□ -1.3
CMSS1-207ENST00000494412 MAGEB6P1A0A0J9YX57 407 aa6.91□□□□□ -1.3
CMSS1-207ENST00000494412 SIAH2O43255 324 aa6.91□□□□□ -1.3
CMSS1-207ENST00000494412 PTK2Q05397 1052 aa6.91□□□□□ -1.3
CMSS1-207ENST00000494412 PHLDB3Q6NSJ2 640 aa6.91□□□□□ -1.3
CMSS1-207ENST00000494412 SH3RF1Q7Z6J0 888 aa6.91□□□□□ -1.3
CMSS1-207ENST00000494412 TXNDC2Q86VQ3 553 aa6.91□□□□□ -1.3
CMSS1-207ENST00000494412 FAM200AQ8TCP9 573 aa6.91□□□□□ -1.3
CMSS1-207ENST00000494412 ZNF592Q92610 1267 aa6.91□□□□□ -1.3
CMSS1-207ENST00000494412 CARD14Q9BXL6 1004 aa6.91□□□□□ -1.3
CMSS1-207ENST00000494412 TOR4AQ9NXH8 423 aa6.91□□□□□ -1.3
CMSS1-207ENST00000494412 TLL2Q9Y6L7 1015 aa6.91□□□□□ -1.3
CMSS1-207ENST00000494412 TTC24A2A3L6 582 aaPredicted RBP6.9□□□□□ -1.3
CMSS1-207ENST00000494412 ATP5J2-PTCD1G3V325 749 aa6.9□□□□□ -1.3
CMSS1-207ENST00000494412 J3QL48 77 aa6.9□□□□□ -1.3
CMSS1-207ENST00000494412 PTK7Q13308 1070 aa6.9□□□□□ -1.3
CMSS1-207ENST00000494412 PDXDC2PQ6P474 469 aa6.9□□□□□ -1.3
CMSS1-207ENST00000494412 BPHLQ86WA6 291 aaPredicted RBP6.9□□□□□ -1.3
CMSS1-207ENST00000494412 CYP4X1Q8N118 509 aa6.9□□□□□ -1.3
CMSS1-207ENST00000494412 PLPP7Q8NBV4 271 aa6.9□□□□□ -1.3
CMSS1-207ENST00000494412 VARSP26640 1264 aaKnown RBP6.89□□□□□ -1.31
CMSS1-207ENST00000494412 SSFA2P28290 1259 aa6.89□□□□□ -1.31
CMSS1-207ENST00000494412 ARID4AP29374 1257 aaPredicted RBP6.89□□□□□ -1.31
CMSS1-207ENST00000494412 GPKOWQ92917 476 aaPredicted RBP eCLIP6.89□□□□□ -1.31
CMSS1-207ENST00000494412 ARHGAP9Q9BRR9 750 aa6.89□□□□□ -1.31
CMSS1-207ENST00000494412 CDCA7Q9BWT1 371 aaPredicted RBP6.89□□□□□ -1.31
CMSS1-207ENST00000494412 GPSM3Q9Y4H4 160 aa6.89□□□□□ -1.31
CMSS1-207ENST00000494412 NRG2O14511 850 aaPredicted RBP6.88□□□□□ -1.31
CMSS1-207ENST00000494412 ALDH1A1P00352 501 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms