RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 DDX11L8A8MPP1 907 aa9.36□□□□□ -0.91
SNX13-210ENST00000494402 PIK3CDO00329 1044 aa9.36□□□□□ -0.91
SNX13-210ENST00000494402 GNL2Q13823 731 aaKnown RBP9.36□□□□□ -0.91
SNX13-210ENST00000494402 RNF135Q8IUD6 432 aa9.36□□□□□ -0.91
SNX13-210ENST00000494402 EPS8L1Q8TE68 723 aa9.36□□□□□ -0.91
SNX13-210ENST00000494402 MARVELD3Q96A59 401 aa9.36□□□□□ -0.91
SNX13-210ENST00000494402 TGIF2Q9GZN2 237 aa9.36□□□□□ -0.91
SNX13-210ENST00000494402 MKRN1Q9UHC7 482 aaKnown RBP9.36□□□□□ -0.91
SNX13-210ENST00000494402 IQSEC3Q9UPP2 1182 aaPredicted RBP9.36□□□□□ -0.91
SNX13-210ENST00000494402 RASA1P20936 1047 aa9.35□□□□□ -0.91
SNX13-210ENST00000494402 SOGA3Q5TF21 947 aa9.35□□□□□ -0.91
SNX13-210ENST00000494402 ANKMY2Q8IV38 441 aa9.35□□□□□ -0.91
SNX13-210ENST00000494402 TSC1Q92574 1164 aa9.35□□□□□ -0.91
SNX13-210ENST00000494402 CAPN10Q9HC96 672 aa9.35□□□□□ -0.91
SNX13-210ENST00000494402 PCDHGA10Q9Y5H3 936 aa9.35□□□□□ -0.91
SNX13-210ENST00000494402 ATP5J2-PTCD1G3V325 749 aa9.34□□□□□ -0.91
SNX13-210ENST00000494402 RIMBP2O15034 1052 aa9.34□□□□□ -0.91
SNX13-210ENST00000494402 SCNN1AP37088 669 aa9.34□□□□□ -0.91
SNX13-210ENST00000494402 ZNF211Q13398 564 aaPredicted RBP9.34□□□□□ -0.91
SNX13-210ENST00000494402 HSP90AB2PQ58FF8 381 aa9.34□□□□□ -0.91
SNX13-210ENST00000494402 METTL16Q86W50 562 aaKnown RBP9.34□□□□□ -0.91
SNX13-210ENST00000494402 SLF2Q8IX21 1173 aa9.34□□□□□ -0.91
SNX13-210ENST00000494402 ZSWIM4Q9H7M6 989 aa9.34□□□□□ -0.91
SNX13-210ENST00000494402 NOP58Q9Y2X3 529 aaKnown RBP9.34□□□□□ -0.91
SNX13-210ENST00000494402 RCCD1A6NED2 376 aa9.33□□□□□ -0.92
SNX13-210ENST00000494402 PPP1R3GB7ZBB8 358 aa9.33□□□□□ -0.92
SNX13-210ENST00000494402 FDX1P10109 184 aa9.33□□□□□ -0.92
SNX13-210ENST00000494402 HOXB3P14651 431 aaPredicted RBP9.33□□□□□ -0.92
SNX13-210ENST00000494402 MCCD1P59942 119 aaPredicted RBP9.33□□□□□ -0.92
SNX13-210ENST00000494402 USP46P62068 366 aa9.33□□□□□ -0.92
SNX13-210ENST00000494402 PSME1Q06323 249 aa9.33□□□□□ -0.92
SNX13-210ENST00000494402 RGL4Q8IZJ4 473 aa9.33□□□□□ -0.92
SNX13-210ENST00000494402 NLGN1Q8N2Q7 840 aa9.33□□□□□ -0.92
SNX13-210ENST00000494402 TMEM87AQ8NBN3 555 aa9.33□□□□□ -0.92
SNX13-210ENST00000494402 PMFBP1Q8TBY8 1022 aa9.33□□□□□ -0.92
SNX13-210ENST00000494402 PIF1Q9H611 641 aa9.33□□□□□ -0.92
SNX13-210ENST00000494402 METTL5Q9NRN9 209 aaKnown RBP9.33□□□□□ -0.92
SNX13-210ENST00000494402 C21orf2O43822 256 aa9.32□□□□□ -0.92
SNX13-210ENST00000494402 NR1H3Q13133 447 aa9.32□□□□□ -0.92
SNX13-210ENST00000494402 RNF187Q5TA31 235 aaPredicted RBP9.32□□□□□ -0.92
SNX13-210ENST00000494402 DEPDC4Q8N2C3 294 aa9.32□□□□□ -0.92
SNX13-210ENST00000494402 VTI1AQ96AJ9 217 aa9.32□□□□□ -0.92
SNX13-210ENST00000494402 ZSWIM6Q9HCJ5 1215 aa9.32□□□□□ -0.92
SNX13-210ENST00000494402 SNPHO15079 494 aa9.31□□□□□ -0.92
SNX13-210ENST00000494402 PARNO95453 639 aaKnown RBP9.31□□□□□ -0.92
SNX13-210ENST00000494402 LDLRAD1Q5T700 205 aa9.31□□□□□ -0.92
SNX13-210ENST00000494402 RNF34Q969K3 372 aa9.31□□□□□ -0.92
SNX13-210ENST00000494402 GMLQ99445 158 aa9.31□□□□□ -0.92
SNX13-210ENST00000494402 KDM4FA0A1W2PPD8 638 aa9.3□□□□□ -0.92
SNX13-210ENST00000494402 IRX6P78412 446 aaPredicted RBP9.3□□□□□ -0.92
SNX13-210ENST00000494402 FGD1P98174 961 aa9.3□□□□□ -0.92
SNX13-210ENST00000494402 RBL2Q08999 1139 aa9.3□□□□□ -0.92
SNX13-210ENST00000494402 MTMR2Q13614 643 aa9.3□□□□□ -0.92
SNX13-210ENST00000494402 TCEAL1Q15170 157 aa9.3□□□□□ -0.92
SNX13-210ENST00000494402 TAS1R3Q7RTX0 852 aa9.3□□□□□ -0.92
SNX13-210ENST00000494402 KRTAP3-3Q9BYR6 98 aa9.3□□□□□ -0.92
SNX13-210ENST00000494402 KRTAP3-2Q9BYR7 98 aa9.3□□□□□ -0.92
SNX13-210ENST00000494402 ANO2Q9NQ90 1003 aa9.3□□□□□ -0.92
SNX13-210ENST00000494402 NR6A1Q15406 480 aa9.29□□□□□ -0.92
SNX13-210ENST00000494402 ARSIQ5FYB1 569 aa9.29□□□□□ -0.92
SNX13-210ENST00000494402 MRS2Q9HD23 443 aa9.29□□□□□ -0.92
SNX13-210ENST00000494402 HMGB1P1B2RPK0 211 aaPredicted RBP9.28□□□□□ -0.92
SNX13-210ENST00000494402 HOXA2O43364 376 aa9.28□□□□□ -0.92
SNX13-210ENST00000494402 PEX14O75381 377 aa9.28□□□□□ -0.92
SNX13-210ENST00000494402 MAP4K4O95819 1239 aaPredicted RBP9.28□□□□□ -0.92
SNX13-210ENST00000494402 P4HBP07237 508 aaKnown RBP9.28□□□□□ -0.92
SNX13-210ENST00000494402 HSD3B2P26439 372 aa9.28□□□□□ -0.92
SNX13-210ENST00000494402 DNAJA1P31689 397 aaKnown RBP9.28□□□□□ -0.92
SNX13-210ENST00000494402 XPCQ01831 940 aaPredicted RBP9.28□□□□□ -0.92
SNX13-210ENST00000494402 DPYDQ12882 1025 aa9.28□□□□□ -0.92
SNX13-210ENST00000494402 HSP90AB4PQ58FF6 505 aa9.28□□□□□ -0.92
SNX13-210ENST00000494402 ZNF746Q6NUN9 644 aaPredicted RBP9.28□□□□□ -0.92
SNX13-210ENST00000494402 CCDC194A0A1B0GVG4 234 aa9.27□□□□□ -0.93
SNX13-210ENST00000494402 NUDT7P0C024 238 aa9.27□□□□□ -0.93
SNX13-210ENST00000494402 FANCCQ00597 558 aa9.27□□□□□ -0.93
SNX13-210ENST00000494402 GPR153Q6NV75 609 aa9.27□□□□□ -0.93
SNX13-210ENST00000494402 JPH4Q96JJ6 628 aa9.27□□□□□ -0.93
SNX13-210ENST00000494402 OSBPL2Q9H1P3 480 aa9.27□□□□□ -0.93
SNX13-210ENST00000494402 CHPF2Q9P2E5 772 aa9.27□□□□□ -0.93
SNX13-210ENST00000494402 PRSS12P56730 875 aa9.26□□□□□ -0.93
SNX13-210ENST00000494402 SF3B2Q13435 895 aaKnown RBP9.26□□□□□ -0.93
SNX13-210ENST00000494402 NCOA4Q13772 614 aa9.26□□□□□ -0.93
SNX13-210ENST00000494402 C6orf132Q5T0Z8 1188 aa9.26□□□□□ -0.93
SNX13-210ENST00000494402 SMC5Q8IY18 1101 aa9.26□□□□□ -0.93
SNX13-210ENST00000494402 KHSRPQ92945 711 aaKnown RBP eCLIP9.26□□□□□ -0.932e-6■■■□□ 17.9
SNX13-210ENST00000494402 CXXC1Q9P0U4 656 aaPredicted RBP9.26□□□□□ -0.93
SNX13-210ENST00000494402 PCDHGC3Q9UN70 934 aa9.26□□□□□ -0.93
SNX13-210ENST00000494402 FAN1Q9Y2M0 1017 aa9.26□□□□□ -0.93
SNX13-210ENST00000494402 CFAP99D6REC4 459 aa9.25□□□□□ -0.93
SNX13-210ENST00000494402 PRMT3O60678 531 aa9.25□□□□□ -0.93
SNX13-210ENST00000494402 EIF3JO75822 258 aaKnown RBP9.25□□□□□ -0.93
SNX13-210ENST00000494402 NEFLP07196 543 aa9.25□□□□□ -0.93
SNX13-210ENST00000494402 ARHGAP4P98171 946 aa9.25□□□□□ -0.93
SNX13-210ENST00000494402 FKBP4Q02790 459 aaKnown RBP eCLIP9.25□□□□□ -0.93
SNX13-210ENST00000494402 TEX2Q8IWB9 1127 aa9.25□□□□□ -0.93
SNX13-210ENST00000494402 RDH13Q8NBN7 331 aa9.25□□□□□ -0.93
SNX13-210ENST00000494402 FAM174AQ8TBP5 190 aa9.25□□□□□ -0.93
SNX13-210ENST00000494402 ACBD3Q9H3P7 528 aa9.25□□□□□ -0.93
SNX13-210ENST00000494402 COL4A3BPQ9Y5P4 624 aa9.25□□□□□ -0.93
SNX13-210ENST00000494402 ZNF76P36508 570 aa9.24□□□□□ -0.93
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