RNA–Protein interactions for RNA: ENST00000494317.1

LCN2-207, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 625 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-207ENST00000494317 WDR17Q8IZU2 1322 aa32.3■■■□□ 2.76
LCN2-207ENST00000494317 ST20-MTHFSA0A0A6YYL1 179 aa32.3■■■□□ 2.76
LCN2-207ENST00000494317 NME9Q86XW9 330 aa32.3■■■□□ 2.76
LCN2-207ENST00000494317 PUS7Q96PZ0 661 aaKnown RBP32.3■■■□□ 2.76
LCN2-207ENST00000494317 TESK2Q96S53 571 aa32.3■■■□□ 2.76
LCN2-207ENST00000494317 USP31Q70CQ4 1352 aa32.3■■■□□ 2.76
LCN2-207ENST00000494317 TERF2IPQ9NYB0 399 aa32.27■■■□□ 2.76
LCN2-207ENST00000494317 A0A1W2PP64 1363 aa32.27■■■□□ 2.76
LCN2-207ENST00000494317 EDC4Q6P2E9 1401 aaKnown RBP32.26■■■□□ 2.75
LCN2-207ENST00000494317 USP54Q70EL1 1684 aa32.25■■■□□ 2.75
LCN2-207ENST00000494317 EZH2Q15910 746 aaKnown RBP32.25■■■□□ 2.75
LCN2-207ENST00000494317 RGPD5Q99666 1765 aa32.24■■■□□ 2.75
LCN2-207ENST00000494317 PSDA5PKW4 1024 aaPredicted RBP32.24■■■□□ 2.75
LCN2-207ENST00000494317 APBA3O96018 575 aa32.24■■■□□ 2.75
LCN2-207ENST00000494317 CSB-PGBD3P0DP91 1061 aa32.24■■■□□ 2.75
LCN2-207ENST00000494317 CAMKK2Q96RR4 588 aa32.23■■■□□ 2.75
LCN2-207ENST00000494317 LRRC37A3O60309 1634 aa32.22■■■□□ 2.75
LCN2-207ENST00000494317 ABCC6O95255 1503 aa32.21■■■□□ 2.75
LCN2-207ENST00000494317 DDB1Q16531 1140 aa32.21■■■□□ 2.75
LCN2-207ENST00000494317 CARD10Q9BWT7 1032 aa32.2■■■□□ 2.75
LCN2-207ENST00000494317 NINLQ9Y2I6 1382 aa32.19■■■□□ 2.74
LCN2-207ENST00000494317 WNK3Q9BYP7 1800 aa32.19■■■□□ 2.74
LCN2-207ENST00000494317 SLC24A1O60721 1099 aa32.19■■■□□ 2.74
LCN2-207ENST00000494317 OVOS2A0A0G2JMS6 1433 aa32.18■■■□□ 2.74
LCN2-207ENST00000494317 OVOS2A0A0J9YW53 1432 aa32.18■■■□□ 2.74
LCN2-207ENST00000494317 OVOS2Q6IE36 1432 aa32.18■■■□□ 2.74
LCN2-207ENST00000494317 PARD3Q8TEW0 1356 aa32.18■■■□□ 2.74
LCN2-207ENST00000494317 USP47Q96K76 1375 aa32.18■■■□□ 2.74
LCN2-207ENST00000494317 CDCA7Q9BWT1 371 aaPredicted RBP32.17■■■□□ 2.74
LCN2-207ENST00000494317 PEAK1Q9H792 1746 aa32.17■■■□□ 2.74
LCN2-207ENST00000494317 C11orf95C9JLR9 678 aaPredicted RBP32.16■■■□□ 2.74
LCN2-207ENST00000494317 R3HDM1Q15032 1099 aaKnown RBP32.14■■■□□ 2.74
LCN2-207ENST00000494317 LTN1O94822 1766 aa32.12■■■□□ 2.73
LCN2-207ENST00000494317 CCDC7Q96M83 1385 aa32.12■■■□□ 2.73
LCN2-207ENST00000494317 ERBB3P21860 1342 aa32.11■■■□□ 2.73
LCN2-207ENST00000494317 TMF1P82094 1093 aa32.1■■■□□ 2.73
LCN2-207ENST00000494317 MARCH10Q8NA82 808 aaPredicted RBP32.1■■■□□ 2.73
LCN2-207ENST00000494317 PCGF6Q9BYE7 350 aa32.1■■■□□ 2.73
LCN2-207ENST00000494317 LRP5O75197 1615 aa32.1■■■□□ 2.73
LCN2-207ENST00000494317 RREB1Q92766 1687 aa32.09■■■□□ 2.73
LCN2-207ENST00000494317 NLRP2Q9NX02 1062 aa32.07■■■□□ 2.72
LCN2-207ENST00000494317 ANKRD36BQ8N2N9 1353 aa32.07■■■□□ 2.72
LCN2-207ENST00000494317 TIMELESSQ9UNS1 1208 aa32.06■■■□□ 2.72
LCN2-207ENST00000494317 SBF2Q86WG5 1849 aa32.05■■■□□ 2.72
LCN2-207ENST00000494317 EXOC5O00471 708 aa32.05■■■□□ 2.72
LCN2-207ENST00000494317 ANKRD24Q8TF21 1146 aa32.05■■■□□ 2.72
LCN2-207ENST00000494317 NUP188Q5SRE5 1749 aa32.05■■■□□ 2.72
LCN2-207ENST00000494317 CLSPNQ9HAW4 1339 aa32.04■■■□□ 2.72
LCN2-207ENST00000494317 COG3Q96JB2 828 aa32.04■■■□□ 2.72
LCN2-207ENST00000494317 BCL9O00512 1426 aa32.03■■■□□ 2.72
LCN2-207ENST00000494317 PTF1AQ7RTS3 328 aa32.03■■■□□ 2.72
LCN2-207ENST00000494317 TNS2Q63HR2 1409 aa32.02■■■□□ 2.72
LCN2-207ENST00000494317 BCL11BQ9C0K0 894 aaPredicted RBP32.02■■■□□ 2.72
LCN2-207ENST00000494317 IP6K1Q92551 441 aa32■■■□□ 2.71
LCN2-207ENST00000494317 NBPF14Q5TI25 921 aa31.99■■■□□ 2.71
LCN2-207ENST00000494317 PLSCR1O15162 318 aa31.97■■■□□ 2.71
LCN2-207ENST00000494317 IL2RBP14784 551 aa31.97■■■□□ 2.71
LCN2-207ENST00000494317 CDCA8Q53HL2 280 aa31.97■■■□□ 2.71
LCN2-207ENST00000494317 MAP3K19Q56UN5 1328 aa31.97■■■□□ 2.71
LCN2-207ENST00000494317 FBLN1P23142 703 aa31.96■■■□□ 2.71
LCN2-207ENST00000494317 RGPD3A6NKT7 1758 aaPredicted RBP31.96■■■□□ 2.71
LCN2-207ENST00000494317 RGPD4Q7Z3J3 1758 aa31.96■■■□□ 2.71
LCN2-207ENST00000494317 LTV1Q96GA3 475 aaPredicted RBP31.95■■■□□ 2.71
LCN2-207ENST00000494317 FYB1O15117 783 aa31.93■■■□□ 2.7
LCN2-207ENST00000494317 GGNBP2Q9H3C7 697 aa31.92■■■□□ 2.7
LCN2-207ENST00000494317 HOXC9P31274 260 aa31.91■■■□□ 2.7
LCN2-207ENST00000494317 AMPHP49418 695 aa31.91■■■□□ 2.7
LCN2-207ENST00000494317 FAM208AQ9UK61 1670 aaKnown RBP31.89■■■□□ 2.7
LCN2-207ENST00000494317 KCNQ2O43526 872 aa31.87■■■□□ 2.69
LCN2-207ENST00000494317 PROM2Q8N271 834 aa31.87■■■□□ 2.69
LCN2-207ENST00000494317 RRS1Q15050 365 aaKnown RBP31.86■■■□□ 2.69
LCN2-207ENST00000494317 MYOM1P52179 1685 aa31.86■■■□□ 2.69
LCN2-207ENST00000494317 RTL1A6NKG5 1358 aa31.85■■■□□ 2.69
LCN2-207ENST00000494317 ACSBG1Q96GR2 724 aa31.85■■■□□ 2.69
LCN2-207ENST00000494317 NHSQ6T4R5 1651 aa31.84■■■□□ 2.69
LCN2-207ENST00000494317 ANO8Q9HCE9 1232 aaPredicted RBP31.84■■■□□ 2.69
LCN2-207ENST00000494317 CARD14Q9BXL6 1004 aa31.83■■■□□ 2.69
LCN2-207ENST00000494317 KIF20BQ96Q89 1820 aa31.82■■■□□ 2.68
LCN2-207ENST00000494317 TXNRD1Q16881 649 aa31.81■■■□□ 2.68
LCN2-207ENST00000494317 CCER1Q8TC90 406 aaPredicted RBP31.8■■■□□ 2.68
LCN2-207ENST00000494317 NSD3Q9BZ95 1437 aa31.8■■■□□ 2.68
LCN2-207ENST00000494317 DDX54Q8TDD1 881 aaKnown RBP31.78■■■□□ 2.68
LCN2-207ENST00000494317 RGPD2P0DJD1 1756 aa31.77■■■□□ 2.68
LCN2-207ENST00000494317 NBPF6Q5VWK0 638 aa31.74■■■□□ 2.67
LCN2-207ENST00000494317 NBPF4Q96M43 638 aa31.74■■■□□ 2.67
LCN2-207ENST00000494317 MEGF6O75095 1541 aa31.74■■■□□ 2.67
LCN2-207ENST00000494317 SPON1Q9HCB6 807 aa31.73■■■□□ 2.67
LCN2-207ENST00000494317 SMG6Q86US8 1419 aaKnown RBP31.73■■■□□ 2.67
LCN2-207ENST00000494317 HSP90AB2PQ58FF8 381 aa31.72■■■□□ 2.67
LCN2-207ENST00000494317 POLR3GLQ9BT43 218 aa31.72■■■□□ 2.67
LCN2-207ENST00000494317 BTAF1O14981 1849 aa31.72■■■□□ 2.67
LCN2-207ENST00000494317 INSRP06213 1382 aa31.71■■■□□ 2.67
LCN2-207ENST00000494317 FLT4P35916 1363 aa31.71■■■□□ 2.67
LCN2-207ENST00000494317 USHBP1Q8N6Y0 703 aa31.71■■■□□ 2.67
LCN2-207ENST00000494317 STK32BQ9NY57 414 aa31.71■■■□□ 2.67
LCN2-207ENST00000494317 KIF24Q5T7B8 1368 aa31.7■■■□□ 2.67
LCN2-207ENST00000494317 EIF4G2P78344 907 aaKnown RBP eCLIP31.7■■■□□ 2.67
LCN2-207ENST00000494317 ZCRB1Q8TBF4 217 aaKnown RBP31.7■■■□□ 2.67
LCN2-207ENST00000494317 CASZ1Q86V15 1759 aa31.7■■■□□ 2.67
LCN2-207ENST00000494317 KAT6BQ8WYB5 2073 aa31.69■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms