RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 TRIM37O94972 964 aa13.76□□□□□ -0.21
UFD1-210ENST00000494054 TOM1L2Q6ZVM7 507 aa13.76□□□□□ -0.21
UFD1-210ENST00000494054 WDR17Q8IZU2 1322 aa13.75□□□□□ -0.21
UFD1-210ENST00000494054 TERF2IPQ9NYB0 399 aa13.75□□□□□ -0.21
UFD1-210ENST00000494054 RGPD1P0DJD0 1748 aa13.75□□□□□ -0.21
UFD1-210ENST00000494054 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
UFD1-210ENST00000494054 RGPD5Q99666 1765 aa13.73□□□□□ -0.21
UFD1-210ENST00000494054 TNS1Q9HBL0 1735 aaKnown RBP13.73□□□□□ -0.21
UFD1-210ENST00000494054 USP47Q96K76 1375 aa13.73□□□□□ -0.21
UFD1-210ENST00000494054 EZH2Q15910 746 aaKnown RBP13.73□□□□□ -0.21
UFD1-210ENST00000494054 PARP4Q9UKK3 1724 aaKnown RBP13.73□□□□□ -0.21
UFD1-210ENST00000494054 DISP2A7MBM2 1401 aa13.73□□□□□ -0.21
UFD1-210ENST00000494054 USP54Q70EL1 1684 aa13.72□□□□□ -0.21
UFD1-210ENST00000494054 CSB-PGBD3P0DP91 1061 aa13.72□□□□□ -0.21
UFD1-210ENST00000494054 CAMKK2Q96RR4 588 aa13.72□□□□□ -0.21
UFD1-210ENST00000494054 CARD10Q9BWT7 1032 aa13.72□□□□□ -0.21
UFD1-210ENST00000494054 PSDA5PKW4 1024 aaPredicted RBP13.71□□□□□ -0.21
UFD1-210ENST00000494054 SLC24A1O60721 1099 aa13.71□□□□□ -0.21
UFD1-210ENST00000494054 APBA3O96018 575 aa13.71□□□□□ -0.21
UFD1-210ENST00000494054 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
UFD1-210ENST00000494054 OVOS2A0A0J9YW53 1432 aa13.71□□□□□ -0.22
UFD1-210ENST00000494054 OVOS2Q6IE36 1432 aa13.71□□□□□ -0.22
UFD1-210ENST00000494054 NINLQ9Y2I6 1382 aa13.71□□□□□ -0.22
UFD1-210ENST00000494054 TMF1P82094 1093 aa13.7□□□□□ -0.22
UFD1-210ENST00000494054 DDB1Q16531 1140 aa13.7□□□□□ -0.22
UFD1-210ENST00000494054 CLSPNQ9HAW4 1339 aa13.69□□□□□ -0.22
UFD1-210ENST00000494054 LRRC37A3O60309 1634 aa13.69□□□□□ -0.22
UFD1-210ENST00000494054 MARCH10Q8NA82 808 aaPredicted RBP13.69□□□□□ -0.22
UFD1-210ENST00000494054 PEAK1Q9H792 1746 aa13.68□□□□□ -0.22
UFD1-210ENST00000494054 FBLN1P23142 703 aa13.68□□□□□ -0.22
UFD1-210ENST00000494054 CDCA7Q9BWT1 371 aaPredicted RBP13.68□□□□□ -0.22
UFD1-210ENST00000494054 ABCC6O95255 1503 aa13.68□□□□□ -0.22
UFD1-210ENST00000494054 ERBB3P21860 1342 aa13.67□□□□□ -0.22
UFD1-210ENST00000494054 OVOS2A0A0G2JMS6 1433 aa13.67□□□□□ -0.22
UFD1-210ENST00000494054 R3HDM1Q15032 1099 aaKnown RBP13.67□□□□□ -0.22
UFD1-210ENST00000494054 PTF1AQ7RTS3 328 aa13.67□□□□□ -0.22
UFD1-210ENST00000494054 ANKRD36BQ8N2N9 1353 aa13.67□□□□□ -0.22
UFD1-210ENST00000494054 CCDC7Q96M83 1385 aa13.67□□□□□ -0.22
UFD1-210ENST00000494054 WNK3Q9BYP7 1800 aa13.67□□□□□ -0.22
UFD1-210ENST00000494054 LTN1O94822 1766 aa13.66□□□□□ -0.22
UFD1-210ENST00000494054 ANKRD24Q8TF21 1146 aa13.66□□□□□ -0.22
UFD1-210ENST00000494054 COG3Q96JB2 828 aa13.66□□□□□ -0.22
UFD1-210ENST00000494054 NLRP2Q9NX02 1062 aa13.66□□□□□ -0.22
UFD1-210ENST00000494054 C11orf95C9JLR9 678 aaPredicted RBP13.65□□□□□ -0.22
UFD1-210ENST00000494054 EXOC5O00471 708 aa13.65□□□□□ -0.22
UFD1-210ENST00000494054 FYB1O15117 783 aa13.65□□□□□ -0.22
UFD1-210ENST00000494054 IP6K1Q92551 441 aa13.65□□□□□ -0.22
UFD1-210ENST00000494054 PARD3Q8TEW0 1356 aa13.64□□□□□ -0.23
UFD1-210ENST00000494054 MAP3K19Q56UN5 1328 aa13.64□□□□□ -0.23
UFD1-210ENST00000494054 CCER1Q8TC90 406 aaPredicted RBP13.63□□□□□ -0.23
UFD1-210ENST00000494054 LTV1Q96GA3 475 aaPredicted RBP13.63□□□□□ -0.23
UFD1-210ENST00000494054 GGNBP2Q9H3C7 697 aa13.63□□□□□ -0.23
UFD1-210ENST00000494054 SRCAPQ6ZRS2 3230 aa13.62□□□□□ -0.23
UFD1-210ENST00000494054 SBF2Q86WG5 1849 aa13.62□□□□□ -0.23
UFD1-210ENST00000494054 CDCA8Q53HL2 280 aa13.62□□□□□ -0.23
UFD1-210ENST00000494054 CARD14Q9BXL6 1004 aa13.62□□□□□ -0.23
UFD1-210ENST00000494054 BCL11BQ9C0K0 894 aaPredicted RBP13.62□□□□□ -0.23
UFD1-210ENST00000494054 BCL9O00512 1426 aa13.62□□□□□ -0.23
UFD1-210ENST00000494054 RREB1Q92766 1687 aa13.62□□□□□ -0.23
UFD1-210ENST00000494054 PLSCR1O15162 318 aa13.61□□□□□ -0.23
UFD1-210ENST00000494054 IL2RBP14784 551 aa13.61□□□□□ -0.23
UFD1-210ENST00000494054 HOXC9P31274 260 aa13.61□□□□□ -0.23
UFD1-210ENST00000494054 TNS2Q63HR2 1409 aa13.61□□□□□ -0.23
UFD1-210ENST00000494054 KCNQ2O43526 872 aa13.6□□□□□ -0.23
UFD1-210ENST00000494054 AMPHP49418 695 aa13.6□□□□□ -0.23
UFD1-210ENST00000494054 RRS1Q15050 365 aaKnown RBP13.6□□□□□ -0.23
UFD1-210ENST00000494054 NUP188Q5SRE5 1749 aa13.6□□□□□ -0.23
UFD1-210ENST00000494054 PROM2Q8N271 834 aa13.59□□□□□ -0.23
UFD1-210ENST00000494054 MYOM1P52179 1685 aa13.59□□□□□ -0.23
UFD1-210ENST00000494054 LRP5O75197 1615 aa13.58□□□□□ -0.24
UFD1-210ENST00000494054 NBPF14Q5TI25 921 aa13.58□□□□□ -0.24
UFD1-210ENST00000494054 ACSBG1Q96GR2 724 aa13.57□□□□□ -0.24
UFD1-210ENST00000494054 NSD3Q9BZ95 1437 aa13.56□□□□□ -0.24
UFD1-210ENST00000494054 HSPA5P11021 654 aaKnown RBP13.56□□□□□ -0.24
UFD1-210ENST00000494054 POLR3GLQ9BT43 218 aa13.56□□□□□ -0.24
UFD1-210ENST00000494054 EIF4G2P78344 907 aaKnown RBP eCLIP13.55□□□□□ -0.24
UFD1-210ENST00000494054 HSP90AB2PQ58FF8 381 aa13.55□□□□□ -0.24
UFD1-210ENST00000494054 NBPF6Q5VWK0 638 aa13.55□□□□□ -0.24
UFD1-210ENST00000494054 DDX54Q8TDD1 881 aaKnown RBP13.55□□□□□ -0.24
UFD1-210ENST00000494054 NBPF4Q96M43 638 aa13.55□□□□□ -0.24
UFD1-210ENST00000494054 ANO8Q9HCE9 1232 aaPredicted RBP13.55□□□□□ -0.24
UFD1-210ENST00000494054 RTL1A6NKG5 1358 aa13.55□□□□□ -0.24
UFD1-210ENST00000494054 RGPD3A6NKT7 1758 aaPredicted RBP13.55□□□□□ -0.24
UFD1-210ENST00000494054 RGPD2P0DJD1 1756 aa13.55□□□□□ -0.24
UFD1-210ENST00000494054 RGPD4Q7Z3J3 1758 aa13.55□□□□□ -0.24
UFD1-210ENST00000494054 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
UFD1-210ENST00000494054 FAM208AQ9UK61 1670 aaKnown RBP13.54□□□□□ -0.24
UFD1-210ENST00000494054 TXNRD1Q16881 649 aa13.54□□□□□ -0.24
UFD1-210ENST00000494054 USHBP1Q8N6Y0 703 aa13.54□□□□□ -0.24
UFD1-210ENST00000494054 EMILIN1Q9Y6C2 1016 aa13.53□□□□□ -0.24
UFD1-210ENST00000494054 NHSQ6T4R5 1651 aa13.53□□□□□ -0.24
UFD1-210ENST00000494054 INSRP06213 1382 aa13.52□□□□□ -0.25
UFD1-210ENST00000494054 MEGF6O75095 1541 aa13.52□□□□□ -0.25
UFD1-210ENST00000494054 FLT4P35916 1363 aa13.51□□□□□ -0.25
UFD1-210ENST00000494054 ZCRB1Q8TBF4 217 aaKnown RBP13.51□□□□□ -0.25
UFD1-210ENST00000494054 PDGFDQ9GZP0 370 aaPredicted RBP13.51□□□□□ -0.25
UFD1-210ENST00000494054 KIF24Q5T7B8 1368 aa13.5□□□□□ -0.25
UFD1-210ENST00000494054 CGNL1Q0VF96 1302 aa13.5□□□□□ -0.25
UFD1-210ENST00000494054 PANK3Q9H999 370 aa13.49□□□□□ -0.25
UFD1-210ENST00000494054 SMG6Q86US8 1419 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms