RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 COG3Q96JB2 828 aa9.68□□□□□ -0.86
TOP3A-207ENST00000493648 POLR3GLQ9BT43 218 aa9.68□□□□□ -0.86
TOP3A-207ENST00000493648 NRAPQ86VF7 1730 aa9.68□□□□□ -0.86
TOP3A-207ENST00000493648 USP35Q9P2H5 1018 aa9.67□□□□□ -0.86
TOP3A-207ENST00000493648 CAMTA1Q9Y6Y1 1673 aa9.67□□□□□ -0.86
TOP3A-207ENST00000493648 LARP1Q6PKG0 1096 aaKnown RBP9.66□□□□□ -0.86
TOP3A-207ENST00000493648 KRT27Q7Z3Y8 459 aa9.66□□□□□ -0.86
TOP3A-207ENST00000493648 THRAP3Q9Y2W1 955 aaKnown RBP9.66□□□□□ -0.86
TOP3A-207ENST00000493648 FYB1O15117 783 aa9.65□□□□□ -0.86
TOP3A-207ENST00000493648 CSB-PGBD3P0DP91 1061 aa9.65□□□□□ -0.86
TOP3A-207ENST00000493648 BARGINQ6ZT62 677 aa9.65□□□□□ -0.86
TOP3A-207ENST00000493648 TOM1L2Q6ZVM7 507 aa9.65□□□□□ -0.86
TOP3A-207ENST00000493648 CCDC125Q86Z20 511 aa9.65□□□□□ -0.86
TOP3A-207ENST00000493648 TCP11L2Q8N4U5 519 aa9.65□□□□□ -0.86
TOP3A-207ENST00000493648 AXIN2Q9Y2T1 843 aa9.65□□□□□ -0.86
TOP3A-207ENST00000493648 LMO7Q8WWI1 1683 aa9.64□□□□□ -0.87
TOP3A-207ENST00000493648 GGNBP2Q9H3C7 697 aa9.64□□□□□ -0.87
TOP3A-207ENST00000493648 CRB1P82279 1406 aa9.64□□□□□ -0.87
TOP3A-207ENST00000493648 BRWD3Q6RI45 1802 aa9.63□□□□□ -0.87
TOP3A-207ENST00000493648 COL18A1P39060 1754 aa9.63□□□□□ -0.87
TOP3A-207ENST00000493648 WDR17Q8IZU2 1322 aa9.63□□□□□ -0.87
TOP3A-207ENST00000493648 PDE3BQ13370 1112 aa9.63□□□□□ -0.87
TOP3A-207ENST00000493648 CARD14Q9BXL6 1004 aa9.63□□□□□ -0.87
TOP3A-207ENST00000493648 COL5A2P05997 1499 aaPredicted RBP9.63□□□□□ -0.87
TOP3A-207ENST00000493648 USP54Q70EL1 1684 aa9.63□□□□□ -0.87
TOP3A-207ENST00000493648 OVOS2A0A0J9YW53 1432 aa9.63□□□□□ -0.87
TOP3A-207ENST00000493648 OVOS2Q6IE36 1432 aa9.63□□□□□ -0.87
TOP3A-207ENST00000493648 NFAT5O94916 1531 aa9.62□□□□□ -0.87
TOP3A-207ENST00000493648 AMPHP49418 695 aa9.62□□□□□ -0.87
TOP3A-207ENST00000493648 SF3B2Q13435 895 aaKnown RBP9.62□□□□□ -0.87
TOP3A-207ENST00000493648 IP6K1Q92551 441 aa9.62□□□□□ -0.87
TOP3A-207ENST00000493648 CARD10Q9BWT7 1032 aa9.62□□□□□ -0.87
TOP3A-207ENST00000493648 RGPD5Q99666 1765 aa9.62□□□□□ -0.87
TOP3A-207ENST00000493648 CGNL1Q0VF96 1302 aa9.61□□□□□ -0.87
TOP3A-207ENST00000493648 C11orf95C9JLR9 678 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-207ENST00000493648 CDCA7Q9BWT1 371 aaPredicted RBP9.61□□□□□ -0.87
TOP3A-207ENST00000493648 PANK3Q9H999 370 aa9.61□□□□□ -0.87
TOP3A-207ENST00000493648 NSD3Q9BZ95 1437 aa9.61□□□□□ -0.87
TOP3A-207ENST00000493648 LTN1O94822 1766 aa9.6□□□□□ -0.87
TOP3A-207ENST00000493648 FBLN1P23142 703 aa9.6□□□□□ -0.87
TOP3A-207ENST00000493648 FAM196AQ6ZSG2 479 aa9.6□□□□□ -0.87
TOP3A-207ENST00000493648 ANKRD24Q8TF21 1146 aa9.6□□□□□ -0.87
TOP3A-207ENST00000493648 NLRP2Q9NX02 1062 aa9.6□□□□□ -0.87
TOP3A-207ENST00000493648 MYOM1P52179 1685 aa9.6□□□□□ -0.87
TOP3A-207ENST00000493648 ABCC6O95255 1503 aa9.6□□□□□ -0.87
TOP3A-207ENST00000493648 MAP3K19Q56UN5 1328 aa9.59□□□□□ -0.87
TOP3A-207ENST00000493648 THSD7AQ9UPZ6 1657 aa9.59□□□□□ -0.87
TOP3A-207ENST00000493648 HOXC9P31274 260 aa9.59□□□□□ -0.87
TOP3A-207ENST00000493648 DDB1Q16531 1140 aa9.59□□□□□ -0.87
TOP3A-207ENST00000493648 FAM182BQ5T319 152 aa9.59□□□□□ -0.87
TOP3A-207ENST00000493648 CCDC7Q96M83 1385 aa9.59□□□□□ -0.87
TOP3A-207ENST00000493648 KIF20BQ96Q89 1820 aa9.59□□□□□ -0.88
TOP3A-207ENST00000493648 ERBB3P21860 1342 aa9.58□□□□□ -0.88
TOP3A-207ENST00000493648 BLMP54132 1417 aaPredicted RBP9.58□□□□□ -0.88
TOP3A-207ENST00000493648 EXOC5O00471 708 aa9.58□□□□□ -0.88
TOP3A-207ENST00000493648 RRS1Q15050 365 aaKnown RBP9.58□□□□□ -0.88
TOP3A-207ENST00000493648 LTV1Q96GA3 475 aaPredicted RBP9.58□□□□□ -0.88
TOP3A-207ENST00000493648 KNSTRNQ9Y448 316 aa9.58□□□□□ -0.88
TOP3A-207ENST00000493648 KIF7Q2M1P5 1343 aa9.57□□□□□ -0.88
TOP3A-207ENST00000493648 RTL1A6NKG5 1358 aa9.56□□□□□ -0.88
TOP3A-207ENST00000493648 PPM1GO15355 546 aaPredicted RBP9.56□□□□□ -0.88
TOP3A-207ENST00000493648 IL2RBP14784 551 aa9.56□□□□□ -0.88
TOP3A-207ENST00000493648 BAG6P46379 1132 aa9.56□□□□□ -0.88
TOP3A-207ENST00000493648 PARP4Q9UKK3 1724 aaKnown RBP9.56□□□□□ -0.88
TOP3A-207ENST00000493648 KIF24Q5T7B8 1368 aa9.55□□□□□ -0.88
TOP3A-207ENST00000493648 TRIM37O94972 964 aa9.55□□□□□ -0.88
TOP3A-207ENST00000493648 MORC1Q86VD1 984 aa9.55□□□□□ -0.88
TOP3A-207ENST00000493648 NSD2O96028 1365 aa9.54□□□□□ -0.88
TOP3A-207ENST00000493648 TNNT2P45379 298 aaPredicted RBP9.54□□□□□ -0.88
TOP3A-207ENST00000493648 HSP90AB2PQ58FF8 381 aa9.54□□□□□ -0.88
TOP3A-207ENST00000493648 DEFB132Q7Z7B7 95 aa9.54□□□□□ -0.88
TOP3A-207ENST00000493648 SMG6Q86US8 1419 aaKnown RBP9.54□□□□□ -0.88
TOP3A-207ENST00000493648 MAP2P11137 1827 aaKnown RBP9.54□□□□□ -0.88
TOP3A-207ENST00000493648 INSRP06213 1382 aa9.53□□□□□ -0.88
TOP3A-207ENST00000493648 FLT4P35916 1363 aa9.53□□□□□ -0.88
TOP3A-207ENST00000493648 APBA3O96018 575 aa9.53□□□□□ -0.88
TOP3A-207ENST00000493648 MARCH10Q8NA82 808 aaPredicted RBP9.53□□□□□ -0.88
TOP3A-207ENST00000493648 POLKQ9UBT6 870 aa9.53□□□□□ -0.88
TOP3A-207ENST00000493648 EMILIN1Q9Y6C2 1016 aa9.53□□□□□ -0.88
TOP3A-207ENST00000493648 WASHC2AQ641Q2 1341 aa9.53□□□□□ -0.88
TOP3A-207ENST00000493648 FAM208AQ9UK61 1670 aaKnown RBP9.52□□□□□ -0.89
TOP3A-207ENST00000493648 OVOS2A0A0G2JMS6 1433 aa9.52□□□□□ -0.89
TOP3A-207ENST00000493648 DISP2A7MBM2 1401 aa9.52□□□□□ -0.89
TOP3A-207ENST00000493648 RGPD1P0DJD0 1748 aa9.52□□□□□ -0.89
TOP3A-207ENST00000493648 EN1Q05925 392 aaPredicted RBP9.52□□□□□ -0.89
TOP3A-207ENST00000493648 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.89
TOP3A-207ENST00000493648 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
TOP3A-207ENST00000493648 WNK3Q9BYP7 1800 aa9.52□□□□□ -0.89
TOP3A-207ENST00000493648 ANKRD26Q9UPS8 1709 aa9.51□□□□□ -0.89
TOP3A-207ENST00000493648 PER1O15534 1290 aaPredicted RBP9.51□□□□□ -0.89
TOP3A-207ENST00000493648 RAPGEF4Q8WZA2 1011 aa9.51□□□□□ -0.89
TOP3A-207ENST00000493648 LRRC37A3O60309 1634 aa9.51□□□□□ -0.89
TOP3A-207ENST00000493648 TATP17735 454 aaPredicted RBP9.5□□□□□ -0.89
TOP3A-207ENST00000493648 AMER1Q5JTC6 1135 aaPredicted RBP9.5□□□□□ -0.89
TOP3A-207ENST00000493648 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
TOP3A-207ENST00000493648 DDX54Q8TDD1 881 aaKnown RBP9.5□□□□□ -0.89
TOP3A-207ENST00000493648 BCL11BQ9C0K0 894 aaPredicted RBP9.5□□□□□ -0.89
TOP3A-207ENST00000493648 RGPD2P0DJD1 1756 aa9.5□□□□□ -0.89
TOP3A-207ENST00000493648 PEAK1Q9H792 1746 aa9.49□□□□□ -0.89
TOP3A-207ENST00000493648 EZH2Q15910 746 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms