RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 SERPINA10Q9UK55 444 aa11.39□□□□□ -0.59
SMG7-208ENST00000493609 DACH1Q9UI36 760 aa11.38□□□□□ -0.59
SMG7-208ENST00000493609 WNT7BP56706 349 aa11.37□□□□□ -0.59
SMG7-208ENST00000493609 DZIP3Q86Y13 1208 aaKnown RBP11.36□□□□□ -0.59
SMG7-208ENST00000493609 UCN2Q96RP3 112 aa11.36□□□□□ -0.59
SMG7-208ENST00000493609 AVPP01185 164 aa11.35□□□□□ -0.59
SMG7-208ENST00000493609 RC3H1Q5TC82 1133 aaKnown RBP11.35□□□□□ -0.59
SMG7-208ENST00000493609 C1QTNF2Q9BXJ5 285 aa11.35□□□□□ -0.59
SMG7-208ENST00000493609 CRIPAKQ8N1N5 446 aa11.34□□□□□ -0.59
SMG7-208ENST00000493609 EHBP1Q8NDI1 1231 aa11.34□□□□□ -0.59
SMG7-208ENST00000493609 CEP126Q9P2H0 1117 aa11.34□□□□□ -0.59
SMG7-208ENST00000493609 PIK3CDO00329 1044 aa11.33□□□□□ -0.6
SMG7-208ENST00000493609 TTC24A2A3L6 582 aaPredicted RBP11.32□□□□□ -0.6
SMG7-208ENST00000493609 VARSP26640 1264 aaKnown RBP11.32□□□□□ -0.6
SMG7-208ENST00000493609 SLC10A4Q96EP9 437 aa11.32□□□□□ -0.6
SMG7-208ENST00000493609 PPP1R12CQ9BZL4 782 aa11.32□□□□□ -0.6
SMG7-208ENST00000493609 WNT7AO00755 349 aa11.31□□□□□ -0.6
SMG7-208ENST00000493609 MCCD1P59942 119 aaPredicted RBP11.31□□□□□ -0.6
SMG7-208ENST00000493609 TBC1D9Q6ZT07 1266 aa11.31□□□□□ -0.6
SMG7-208ENST00000493609 FAM174AQ8TBP5 190 aa11.31□□□□□ -0.6
SMG7-208ENST00000493609 TFIP11Q9UBB9 837 aaKnown RBP11.31□□□□□ -0.6
SMG7-208ENST00000493609 PALM3A6NDB9 673 aaPredicted RBP11.3□□□□□ -0.6
SMG7-208ENST00000493609 AXIN1O15169 862 aa11.3□□□□□ -0.6
SMG7-208ENST00000493609 GIGYF1O75420 1035 aaPredicted RBP11.3□□□□□ -0.6
SMG7-208ENST00000493609 TRMT44Q8IYL2 757 aaKnown RBP11.3□□□□□ -0.6
SMG7-208ENST00000493609 SMPD1P17405 629 aa11.29□□□□□ -0.6
SMG7-208ENST00000493609 RFX1P22670 979 aa11.29□□□□□ -0.6
SMG7-208ENST00000493609 ZNF592Q92610 1267 aa11.29□□□□□ -0.6
SMG7-208ENST00000493609 ARID5BQ14865 1188 aa11.28□□□□□ -0.6
SMG7-208ENST00000493609 SLFNL1Q499Z3 407 aa11.28□□□□□ -0.6
SMG7-208ENST00000493609 CFAP70Q5T0N1 1121 aa11.28□□□□□ -0.6
SMG7-208ENST00000493609 PHTF2Q8N3S3 785 aa11.28□□□□□ -0.6
SMG7-208ENST00000493609 SNIP1Q8TAD8 396 aaKnown RBP11.28□□□□□ -0.6
SMG7-208ENST00000493609 MRGPRX2Q96LB1 330 aa11.28□□□□□ -0.6
SMG7-208ENST00000493609 SIAH2O43255 324 aa11.27□□□□□ -0.61
SMG7-208ENST00000493609 SMCPP49901 116 aaPredicted RBP11.27□□□□□ -0.61
SMG7-208ENST00000493609 CTC1Q2NKJ3 1217 aa11.27□□□□□ -0.61
SMG7-208ENST00000493609 GMPR2Q9P2T1 348 aaKnown RBP11.27□□□□□ -0.61
SMG7-208ENST00000493609 TLL2Q9Y6L7 1015 aa11.27□□□□□ -0.61
SMG7-208ENST00000493609 J3QL48 77 aa11.26□□□□□ -0.61
SMG7-208ENST00000493609 SKIP12755 728 aa11.26□□□□□ -0.61
SMG7-208ENST00000493609 LMOD1P29536 600 aaPredicted RBP11.26□□□□□ -0.61
SMG7-208ENST00000493609 TSGA10IPQ3SY00 556 aa11.26□□□□□ -0.61
SMG7-208ENST00000493609 RNF135Q8IUD6 432 aa11.26□□□□□ -0.61
SMG7-208ENST00000493609 ATP9BO43861 1147 aa11.25□□□□□ -0.61
SMG7-208ENST00000493609 NBPF20Q3BBV1 942 aa11.25□□□□□ -0.61
SMG7-208ENST00000493609 VASH1Q7L8A9 365 aaPredicted RBP11.25□□□□□ -0.61
SMG7-208ENST00000493609 KCTD15Q96SI1 283 aaPredicted RBP11.25□□□□□ -0.61
SMG7-208ENST00000493609 RAB15P59190 212 aa11.24□□□□□ -0.61
SMG7-208ENST00000493609 MAFBQ9Y5Q3 323 aaPredicted RBP11.24□□□□□ -0.61
SMG7-208ENST00000493609 DEPDC4Q8N2C3 294 aa11.23□□□□□ -0.61
SMG7-208ENST00000493609 NFATC2IPQ8NCF5 419 aa11.23□□□□□ -0.61
SMG7-208ENST00000493609 CCDC85AQ96PX6 553 aaPredicted RBP11.23□□□□□ -0.61
SMG7-208ENST00000493609 CDK15Q96Q40 435 aa11.23□□□□□ -0.61
SMG7-208ENST00000493609 CDV3Q9UKY7 258 aaKnown RBP11.23□□□□□ -0.61
SMG7-208ENST00000493609 ESPNB1AK53 854 aa11.22□□□□□ -0.61
SMG7-208ENST00000493609 C11orf95C9JLR9 678 aaPredicted RBP11.22□□□□□ -0.61
SMG7-208ENST00000493609 GRM5P41594 1212 aa11.22□□□□□ -0.61
SMG7-208ENST00000493609 TREML4Q6UXN2 200 aa11.22□□□□□ -0.61
SMG7-208ENST00000493609 PLPP7Q8NBV4 271 aa11.22□□□□□ -0.61
SMG7-208ENST00000493609 MAP4K5Q9Y4K4 846 aa11.22□□□□□ -0.61
SMG7-208ENST00000493609 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.21□□□□□ -0.61
SMG7-208ENST00000493609 USP17L5A8MUK1 530 aa11.21□□□□□ -0.61
SMG7-208ENST00000493609 CDCA8Q53HL2 280 aa11.2□□□□□ -0.62
SMG7-208ENST00000493609 INTS6LQ5JSJ4 861 aaKnown RBP11.2□□□□□ -0.62
SMG7-208ENST00000493609 LCE2AQ5TA79 106 aaPredicted RBP11.2□□□□□ -0.62
SMG7-208ENST00000493609 RNF20Q5VTR2 975 aa11.2□□□□□ -0.62
SMG7-208ENST00000493609 HPS1Q92902 700 aa11.2□□□□□ -0.62
SMG7-208ENST00000493609 CHIC2Q9UKJ5 165 aa11.2□□□□□ -0.62
SMG7-208ENST00000493609 USP17L3A6NCW0 530 aa11.19□□□□□ -0.62
SMG7-208ENST00000493609 USP17L4A6NCW7 530 aa11.19□□□□□ -0.62
SMG7-208ENST00000493609 FSHRP23945 695 aa11.19□□□□□ -0.62
SMG7-208ENST00000493609 USP17L2Q6R6M4 530 aa11.19□□□□□ -0.62
SMG7-208ENST00000493609 USP17L1Q7RTZ2 530 aa11.19□□□□□ -0.62
SMG7-208ENST00000493609 MPNDQ8N594 471 aa11.19□□□□□ -0.62
SMG7-208ENST00000493609 CDCA7Q9BWT1 371 aaPredicted RBP11.19□□□□□ -0.62
SMG7-208ENST00000493609 ALDH1A1P00352 501 aa11.18□□□□□ -0.62
SMG7-208ENST00000493609 SRPK2P78362 688 aaKnown RBP11.18□□□□□ -0.62
SMG7-208ENST00000493609 NCOA4Q13772 614 aa11.18□□□□□ -0.62
SMG7-208ENST00000493609 SEPT12Q8IYM1 358 aa11.18□□□□□ -0.62
SMG7-208ENST00000493609 DOLKQ9UPQ8 538 aa11.18□□□□□ -0.62
SMG7-208ENST00000493609 ADH1CP00326 375 aa11.17□□□□□ -0.62
SMG7-208ENST00000493609 MAP7D1Q3KQU3 841 aa11.17□□□□□ -0.62
SMG7-208ENST00000493609 ATP13A2Q9NQ11 1180 aa11.17□□□□□ -0.62
SMG7-208ENST00000493609 PCDHB11Q9Y5F2 797 aa11.17□□□□□ -0.62
SMG7-208ENST00000493609 ERVH48-1M5A8F1 160 aa11.16□□□□□ -0.62
SMG7-208ENST00000493609 OXLD1Q5BKU9 147 aa11.16□□□□□ -0.62
SMG7-208ENST00000493609 PLEKHM2Q8IWE5 1019 aa11.16□□□□□ -0.62
SMG7-208ENST00000493609 PBXIP1Q96AQ6 731 aa11.16□□□□□ -0.62
SMG7-208ENST00000493609 ARXQ96QS3 562 aa11.16□□□□□ -0.62
SMG7-208ENST00000493609 KANK4Q5T7N3 995 aaPredicted RBP11.15□□□□□ -0.62
SMG7-208ENST00000493609 NR3C2P08235 984 aa11.14□□□□□ -0.63
SMG7-208ENST00000493609 VRTNQ9H8Y1 702 aa11.14□□□□□ -0.63
SMG7-208ENST00000493609 TMPRSS4Q9NRS4 437 aa11.14□□□□□ -0.63
SMG7-208ENST00000493609 PPP1R15AO75807 674 aaPredicted RBP11.13□□□□□ -0.63
SMG7-208ENST00000493609 NR5A1Q13285 461 aa11.13□□□□□ -0.63
SMG7-208ENST00000493609 EML3Q32P44 896 aa11.13□□□□□ -0.63
SMG7-208ENST00000493609 MKRN1Q9UHC7 482 aaKnown RBP11.13□□□□□ -0.63
SMG7-208ENST00000493609 SNRPBP14678 240 aaKnown RBP11.12□□□□□ -0.63
SMG7-208ENST00000493609 HOMEZQ8IX15 550 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms