RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 AKAP12Q02952 1782 aa24.42■■□□□ 1.5
NECAB3-214ENST00000493590 IFFO2Q5TF58 517 aa24.42■■□□□ 1.5
NECAB3-214ENST00000493590 WNK3Q9BYP7 1800 aa24.41■■□□□ 1.5
NECAB3-214ENST00000493590 PLEKHG3A1L390 1219 aa24.4■■□□□ 1.5
NECAB3-214ENST00000493590 TXNRD1Q16881 649 aa24.39■■□□□ 1.49
NECAB3-214ENST00000493590 MARCH10Q8NA82 808 aaPredicted RBP24.39■■□□□ 1.49
NECAB3-214ENST00000493590 SLC15A2Q16348 729 aa24.38■■□□□ 1.49
NECAB3-214ENST00000493590 MTFR1LQ9H019 292 aa24.38■■□□□ 1.49
NECAB3-214ENST00000493590 PPIP5K1Q6PFW1 1433 aa24.35■■□□□ 1.49
NECAB3-214ENST00000493590 AATKQ6ZMQ8 1374 aa24.34■■□□□ 1.49
NECAB3-214ENST00000493590 NLRP6P59044 892 aa24.33■■□□□ 1.49
NECAB3-214ENST00000493590 SRPK2P78362 688 aaKnown RBP24.33■■□□□ 1.49
NECAB3-214ENST00000493590 ARXQ96QS3 562 aa24.33■■□□□ 1.49
NECAB3-214ENST00000493590 GIGYF1O75420 1035 aaPredicted RBP24.32■■□□□ 1.48
NECAB3-214ENST00000493590 GPR162Q16538 588 aa24.32■■□□□ 1.48
NECAB3-214ENST00000493590 SGIP1Q9BQI5 828 aa24.32■■□□□ 1.48
NECAB3-214ENST00000493590 WDR17Q8IZU2 1322 aa24.31■■□□□ 1.48
NECAB3-214ENST00000493590 KLHL34Q8N239 644 aa24.3■■□□□ 1.48
NECAB3-214ENST00000493590 SLIT3O75094 1523 aa24.3■■□□□ 1.48
NECAB3-214ENST00000493590 COL18A1P39060 1754 aa24.29■■□□□ 1.48
NECAB3-214ENST00000493590 BCL9O00512 1426 aa24.29■■□□□ 1.48
NECAB3-214ENST00000493590 CSB-PGBD3P0DP91 1061 aa24.29■■□□□ 1.48
NECAB3-214ENST00000493590 PELP1Q8IZL8 1130 aaKnown RBP24.29■■□□□ 1.48
NECAB3-214ENST00000493590 CDCA7Q9BWT1 371 aaPredicted RBP24.29■■□□□ 1.48
NECAB3-214ENST00000493590 AXIN2Q9Y2T1 843 aa24.29■■□□□ 1.48
NECAB3-214ENST00000493590 CABP2Q9NPB3 220 aa24.28■■□□□ 1.48
NECAB3-214ENST00000493590 RGPD5Q99666 1765 aa24.27■■□□□ 1.48
NECAB3-214ENST00000493590 SOX12O15370 315 aa24.26■■□□□ 1.47
NECAB3-214ENST00000493590 STAC3Q96MF2 364 aa24.26■■□□□ 1.47
NECAB3-214ENST00000493590 EXOC5O00471 708 aa24.25■■□□□ 1.47
NECAB3-214ENST00000493590 USP6P35125 1406 aa24.25■■□□□ 1.47
NECAB3-214ENST00000493590 ACSBG1Q96GR2 724 aa24.24■■□□□ 1.47
NECAB3-214ENST00000493590 RAB3GAP2Q9H2M9 1393 aa24.24■■□□□ 1.47
NECAB3-214ENST00000493590 CPSF1Q10570 1443 aaKnown RBP24.24■■□□□ 1.47
NECAB3-214ENST00000493590 PIK3C2AO00443 1686 aa24.24■■□□□ 1.47
NECAB3-214ENST00000493590 MAP3K5Q99683 1374 aa24.23■■□□□ 1.47
NECAB3-214ENST00000493590 NHSQ6T4R5 1651 aa24.23■■□□□ 1.47
NECAB3-214ENST00000493590 BRD4O60885 1362 aaPredicted RBP24.22■■□□□ 1.47
NECAB3-214ENST00000493590 PAPPAQ13219 1627 aa24.21■■□□□ 1.47
NECAB3-214ENST00000493590 CARD10Q9BWT7 1032 aa24.21■■□□□ 1.47
NECAB3-214ENST00000493590 CABP1Q9NZU7 370 aa24.21■■□□□ 1.47
NECAB3-214ENST00000493590 TNS2Q63HR2 1409 aa24.19■■□□□ 1.46
NECAB3-214ENST00000493590 QRICH2Q9H0J4 1663 aa24.19■■□□□ 1.46
NECAB3-214ENST00000493590 ZNF827Q17R98 1081 aa24.19■■□□□ 1.46
NECAB3-214ENST00000493590 ARHGEF25Q86VW2 580 aa24.17■■□□□ 1.46
NECAB3-214ENST00000493590 SHANK3Q9BYB0 1731 aa24.17■■□□□ 1.46
NECAB3-214ENST00000493590 KIAA1210Q9ULL0 1709 aa24.17■■□□□ 1.46
NECAB3-214ENST00000493590 CEP350Q5VT06 3117 aa24.17■■□□□ 1.46
NECAB3-214ENST00000493590 CENPJQ9HC77 1338 aaPredicted RBP24.16■■□□□ 1.46
NECAB3-214ENST00000493590 NBPF1Q3BBV0 1214 aa24.16■■□□□ 1.46
NECAB3-214ENST00000493590 BTAF1O14981 1849 aa24.16■■□□□ 1.46
NECAB3-214ENST00000493590 CCDC7Q96M83 1385 aa24.15■■□□□ 1.46
NECAB3-214ENST00000493590 TRPM1Q7Z4N2 1603 aa24.14■■□□□ 1.46
NECAB3-214ENST00000493590 POLD1P28340 1107 aa24.14■■□□□ 1.45
NECAB3-214ENST00000493590 GOLGB1Q14789 3259 aaKnown RBP24.13■■□□□ 1.45
NECAB3-214ENST00000493590 KCNH5Q8NCM2 988 aa24.13■■□□□ 1.45
NECAB3-214ENST00000493590 KAT6BQ8WYB5 2073 aa24.13■■□□□ 1.45
NECAB3-214ENST00000493590 ABCC6O95255 1503 aa24.12■■□□□ 1.45
NECAB3-214ENST00000493590 NLGN2Q8NFZ4 835 aa24.11■■□□□ 1.45
NECAB3-214ENST00000493590 LRRC4BQ9NT99 713 aa24.11■■□□□ 1.45
NECAB3-214ENST00000493590 TTC21BQ7Z4L5 1316 aa24.08■■□□□ 1.44
NECAB3-214ENST00000493590 NFAT5O94916 1531 aa24.07■■□□□ 1.44
NECAB3-214ENST00000493590 NLRP2Q9NX02 1062 aa24.07■■□□□ 1.44
NECAB3-214ENST00000493590 AKT1S1Q96B36 256 aa24.06■■□□□ 1.44
NECAB3-214ENST00000493590 QSER1Q2KHR3 1735 aa24.05■■□□□ 1.44
NECAB3-214ENST00000493590 SLC16A10Q8TF71 515 aa24.05■■□□□ 1.44
NECAB3-214ENST00000493590 PNPLA7Q6ZV29 1317 aa24.05■■□□□ 1.44
NECAB3-214ENST00000493590 IL2RBP14784 551 aa24.04■■□□□ 1.44
NECAB3-214ENST00000493590 YBX3P16989 372 aaKnown RBP eCLIP24.04■■□□□ 1.44
NECAB3-214ENST00000493590 TFCP2L1Q9NZI6 479 aa24.04■■□□□ 1.44
NECAB3-214ENST00000493590 TUBGCP6Q96RT7 1819 aa24.04■■□□□ 1.44
NECAB3-214ENST00000493590 KCNQ4P56696 695 aa24.03■■□□□ 1.44
NECAB3-214ENST00000493590 COL24A1Q17RW2 1714 aa24.03■■□□□ 1.44
NECAB3-214ENST00000493590 ATP10DQ9P241 1426 aa24.02■■□□□ 1.44
NECAB3-214ENST00000493590 EVC2Q86UK5 1308 aa24.02■■□□□ 1.44
NECAB3-214ENST00000493590 GRIN3BO60391 1043 aa24.01■■□□□ 1.43
NECAB3-214ENST00000493590 TTC21AQ8NDW8 1320 aa24.01■■□□□ 1.43
NECAB3-214ENST00000493590 ERBB3P21860 1342 aa24■■□□□ 1.43
NECAB3-214ENST00000493590 MSH5O43196 834 aa23.99■■□□□ 1.43
NECAB3-214ENST00000493590 SLC27A3Q5K4L6 730 aa23.99■■□□□ 1.43
NECAB3-214ENST00000493590 ZNF692Q9BU19 519 aaPredicted RBP23.99■■□□□ 1.43
NECAB3-214ENST00000493590 ZNF526Q8TF50 670 aaPredicted RBP23.98■■□□□ 1.43
NECAB3-214ENST00000493590 LTN1O94822 1766 aa23.98■■□□□ 1.43
NECAB3-214ENST00000493590 DDX54Q8TDD1 881 aaKnown RBP23.97■■□□□ 1.43
NECAB3-214ENST00000493590 SYTL4Q96C24 671 aaPredicted RBP23.97■■□□□ 1.43
NECAB3-214ENST00000493590 GPBP1L1Q9HC44 474 aaPredicted RBP23.97■■□□□ 1.43
NECAB3-214ENST00000493590 KTN1Q86UP2 1357 aaKnown RBP23.96■■□□□ 1.43
NECAB3-214ENST00000493590 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.95■■□□□ 1.423e-6■□□□□ 9.1
NECAB3-214ENST00000493590 ANKRD24Q8TF21 1146 aa23.95■■□□□ 1.42
NECAB3-214ENST00000493590 HSPA6P17066 643 aa23.93■■□□□ 1.42
NECAB3-214ENST00000493590 MSL1Q68DK7 614 aa23.92■■□□□ 1.42
NECAB3-214ENST00000493590 DOT1LQ8TEK3 1739 aa23.9■■□□□ 1.42
NECAB3-214ENST00000493590 MON2Q7Z3U7 1717 aa23.9■■□□□ 1.42
NECAB3-214ENST00000493590 PRIM1P49642 420 aaKnown RBP23.89■■□□□ 1.41
NECAB3-214ENST00000493590 NME9Q86XW9 330 aa23.89■■□□□ 1.41
NECAB3-214ENST00000493590 LY75O60449 1722 aa23.88■■□□□ 1.41
NECAB3-214ENST00000493590 COL23A1Q86Y22 540 aaPredicted RBP23.87■■□□□ 1.41
NECAB3-214ENST00000493590 CCNL1Q9UK58 526 aaPredicted RBP23.87■■□□□ 1.41
NECAB3-214ENST00000493590 LTV1Q96GA3 475 aaPredicted RBP23.86■■□□□ 1.41
NECAB3-214ENST00000493590 USP31Q70CQ4 1352 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms