RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 LAMC1P11047 1609 aa13.76□□□□□ -0.21
PRPF3-206ENST00000493553 MAP3K4Q9Y6R4 1608 aa13.76□□□□□ -0.21
PRPF3-206ENST00000493553 GNPATO15228 680 aa13.76□□□□□ -0.21
PRPF3-206ENST00000493553 GPIHBP1Q8IV16 184 aa13.76□□□□□ -0.21
PRPF3-206ENST00000493553 KIF7Q2M1P5 1343 aa13.75□□□□□ -0.21
PRPF3-206ENST00000493553 RGL3Q3MIN7 710 aa13.75□□□□□ -0.21
PRPF3-206ENST00000493553 EFCAB6Q5THR3 1501 aa13.74□□□□□ -0.21
PRPF3-206ENST00000493553 KTN1Q86UP2 1357 aaKnown RBP13.74□□□□□ -0.21
PRPF3-206ENST00000493553 FAM69CQ0P6D2 419 aa13.74□□□□□ -0.21
PRPF3-206ENST00000493553 RPGRIP1LQ68CZ1 1315 aa13.73□□□□□ -0.21
PRPF3-206ENST00000493553 PPP4CP60510 307 aa13.73□□□□□ -0.21
PRPF3-206ENST00000493553 CDCA8Q53HL2 280 aa13.73□□□□□ -0.21
PRPF3-206ENST00000493553 POLR1AO95602 1720 aaPredicted RBP13.73□□□□□ -0.21
PRPF3-206ENST00000493553 E9PCH4 1651 aa13.72□□□□□ -0.21
PRPF3-206ENST00000493553 DNAJB2P25686 324 aa13.72□□□□□ -0.21
PRPF3-206ENST00000493553 SWT1Q5T5J6 900 aaKnown RBP13.72□□□□□ -0.21
PRPF3-206ENST00000493553 SPHKAPQ2M3C7 1700 aa13.72□□□□□ -0.21
PRPF3-206ENST00000493553 MROH1Q8NDA8 1641 aa13.72□□□□□ -0.21
PRPF3-206ENST00000493553 WASHC2CQ9Y4E1 1318 aa13.71□□□□□ -0.21
PRPF3-206ENST00000493553 OATP04181 439 aa13.71□□□□□ -0.21
PRPF3-206ENST00000493553 FAM161AQ3B820 660 aa13.71□□□□□ -0.21
PRPF3-206ENST00000493553 IFFO2Q5TF58 517 aa13.71□□□□□ -0.21
PRPF3-206ENST00000493553 ARHGAP31Q2M1Z3 1444 aa13.71□□□□□ -0.22
PRPF3-206ENST00000493553 EIF3AQ14152 1382 aaKnown RBP13.71□□□□□ -0.22
PRPF3-206ENST00000493553 ZMYM4Q5VZL5 1548 aa13.7□□□□□ -0.22
PRPF3-206ENST00000493553 SLF2Q8IX21 1173 aa13.7□□□□□ -0.22
PRPF3-206ENST00000493553 MYOM2P54296 1465 aa13.69□□□□□ -0.22
PRPF3-206ENST00000493553 TRPM1Q7Z4N2 1603 aa13.69□□□□□ -0.22
PRPF3-206ENST00000493553 ST20-MTHFSA0A0A6YYL1 179 aa13.69□□□□□ -0.22
PRPF3-206ENST00000493553 FECHP22830 423 aa13.69□□□□□ -0.22
PRPF3-206ENST00000493553 NECTIN2Q92692 538 aa13.69□□□□□ -0.22
PRPF3-206ENST00000493553 DIP2BQ9P265 1576 aa13.69□□□□□ -0.22
PRPF3-206ENST00000493553 RCCD1A6NED2 376 aa13.68□□□□□ -0.22
PRPF3-206ENST00000493553 RAPGEF3O95398 923 aa13.68□□□□□ -0.22
PRPF3-206ENST00000493553 ITGBL1O95965 494 aaPredicted RBP13.68□□□□□ -0.22
PRPF3-206ENST00000493553 SLC4A3P48751 1232 aa13.68□□□□□ -0.22
PRPF3-206ENST00000493553 PXYLP1Q8TE99 480 aa13.68□□□□□ -0.22
PRPF3-206ENST00000493553 TMEM134Q9H6X4 195 aa13.68□□□□□ -0.22
PRPF3-206ENST00000493553 PRKRIP1Q9H875 184 aaPredicted RBP13.68□□□□□ -0.22
PRPF3-206ENST00000493553 CEP152O94986 1710 aa13.67□□□□□ -0.22
PRPF3-206ENST00000493553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.67□□□□□ -0.22
PRPF3-206ENST00000493553 C11orf95C9JLR9 678 aaPredicted RBP13.67□□□□□ -0.22
PRPF3-206ENST00000493553 TMF1P82094 1093 aa13.67□□□□□ -0.22
PRPF3-206ENST00000493553 GGT6Q6P531 493 aa13.67□□□□□ -0.22
PRPF3-206ENST00000493553 SLC52A1Q9NWF4 448 aa13.67□□□□□ -0.22
PRPF3-206ENST00000493553 FRMPD1Q5SYB0 1578 aa13.66□□□□□ -0.22
PRPF3-206ENST00000493553 DIP2CQ9Y2E4 1556 aa13.66□□□□□ -0.22
PRPF3-206ENST00000493553 ABCC3O15438 1527 aa13.66□□□□□ -0.22
PRPF3-206ENST00000493553 ABCA6Q8N139 1617 aa13.66□□□□□ -0.22
PRPF3-206ENST00000493553 RNF40O75150 1001 aa13.66□□□□□ -0.22
PRPF3-206ENST00000493553 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.66□□□□□ -0.22
PRPF3-206ENST00000493553 METTL3Q86U44 580 aaKnown RBP13.66□□□□□ -0.22
PRPF3-206ENST00000493553 REREQ9P2R6 1566 aa13.66□□□□□ -0.22
PRPF3-206ENST00000493553 RICTORQ6R327 1708 aa13.65□□□□□ -0.22
PRPF3-206ENST00000493553 ZC3H13Q5T200 1668 aaKnown RBP13.65□□□□□ -0.22
PRPF3-206ENST00000493553 CLTCL1P53675 1640 aa13.64□□□□□ -0.23
PRPF3-206ENST00000493553 SCAF11Q99590 1463 aaKnown RBP13.64□□□□□ -0.23
PRPF3-206ENST00000493553 RALBP1Q15311 655 aa13.64□□□□□ -0.23
PRPF3-206ENST00000493553 GTF3C3Q9Y5Q9 886 aa13.64□□□□□ -0.23
PRPF3-206ENST00000493553 KIAA1210Q9ULL0 1709 aa13.64□□□□□ -0.23
PRPF3-206ENST00000493553 AGLP35573 1532 aa13.64□□□□□ -0.23
PRPF3-206ENST00000493553 NPATQ14207 1427 aa13.64□□□□□ -0.23
PRPF3-206ENST00000493553 PPRC1Q5VV67 1664 aaKnown RBP13.63□□□□□ -0.23
PRPF3-206ENST00000493553 NOS1P29475 1434 aa13.63□□□□□ -0.23
PRPF3-206ENST00000493553 NBPF1Q3BBV0 1214 aa13.62□□□□□ -0.23
PRPF3-206ENST00000493553 MADDQ8WXG6 1647 aa13.61□□□□□ -0.23
PRPF3-206ENST00000493553 KIF1BO60333 1816 aa13.61□□□□□ -0.23
PRPF3-206ENST00000493553 NRXN1Q9ULB1 1477 aa13.61□□□□□ -0.23
PRPF3-206ENST00000493553 COL17A1Q9UMD9 1497 aaPredicted RBP13.61□□□□□ -0.23
PRPF3-206ENST00000493553 ADGRB3O60242 1522 aa13.59□□□□□ -0.23
PRPF3-206ENST00000493553 APLP1P51693 650 aa13.59□□□□□ -0.23
PRPF3-206ENST00000493553 TESK2Q96S53 571 aa13.59□□□□□ -0.23
PRPF3-206ENST00000493553 POLR3GLQ9BT43 218 aa13.59□□□□□ -0.23
PRPF3-206ENST00000493553 LMOD2Q6P5Q4 547 aa13.58□□□□□ -0.24
PRPF3-206ENST00000493553 MRS2Q9HD23 443 aa13.58□□□□□ -0.24
PRPF3-206ENST00000493553 CAMSAP1Q5T5Y3 1602 aa13.57□□□□□ -0.24
PRPF3-206ENST00000493553 ZFYVE9O95405 1425 aa13.57□□□□□ -0.24
PRPF3-206ENST00000493553 YEATS2Q9ULM3 1422 aa13.57□□□□□ -0.24
PRPF3-206ENST00000493553 KCNC4Q03721 635 aa13.57□□□□□ -0.24
PRPF3-206ENST00000493553 MAP2K5Q13163 448 aa13.57□□□□□ -0.24
PRPF3-206ENST00000493553 SBNO2Q9Y2G9 1366 aa13.57□□□□□ -0.24
PRPF3-206ENST00000493553 PRR14Q9BWN1 585 aa13.56□□□□□ -0.24
PRPF3-206ENST00000493553 SETBP1Q9Y6X0 1596 aa13.55□□□□□ -0.24
PRPF3-206ENST00000493553 TJAP1Q5JTD0 557 aa13.55□□□□□ -0.24
PRPF3-206ENST00000493553 C14orf93Q9H972 538 aaKnown RBP13.55□□□□□ -0.24
PRPF3-206ENST00000493553 BRD4O60885 1362 aaPredicted RBP13.55□□□□□ -0.24
PRPF3-206ENST00000493553 PUS7Q96PZ0 661 aaKnown RBP13.54□□□□□ -0.24
PRPF3-206ENST00000493553 MYBBP1AQ9BQG0 1328 aaKnown RBP13.54□□□□□ -0.24
PRPF3-206ENST00000493553 A0A0G2JS52 829 aa13.53□□□□□ -0.24
PRPF3-206ENST00000493553 ESF1Q9H501 851 aaKnown RBP13.53□□□□□ -0.24
PRPF3-206ENST00000493553 MINK1Q8N4C8 1332 aaPredicted RBP13.53□□□□□ -0.24
PRPF3-206ENST00000493553 IQGAP1P46940 1657 aa13.53□□□□□ -0.24
PRPF3-206ENST00000493553 NEFLP07196 543 aa13.52□□□□□ -0.25
PRPF3-206ENST00000493553 TMC1Q8TDI8 760 aa13.52□□□□□ -0.25
PRPF3-206ENST00000493553 PHOX2BQ99453 314 aa13.52□□□□□ -0.25
PRPF3-206ENST00000493553 MTRQ99707 1265 aa13.52□□□□□ -0.25
PRPF3-206ENST00000493553 PIK3C2BO00750 1634 aa13.51□□□□□ -0.25
PRPF3-206ENST00000493553 PIK3C2GO75747 1445 aa13.51□□□□□ -0.25
PRPF3-206ENST00000493553 INSRP06213 1382 aa13.51□□□□□ -0.25
PRPF3-206ENST00000493553 ADGRF5Q8IZF2 1346 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms