RNA–Protein interactions for RNA: ENST00000493359.1

NCKAP1-207, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 615 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-207ENST00000493359 TYW1BQ6NUM6 668 aa9.37□□□□□ -0.91
NCKAP1-207ENST00000493359 TSR1Q2NL82 804 aaKnown RBP9.36□□□□□ -0.91
NCKAP1-207ENST00000493359 PCDHGA10Q9Y5H3 936 aa9.36□□□□□ -0.91
NCKAP1-207ENST00000493359 IFT172Q9UG01 1749 aa9.36□□□□□ -0.91
NCKAP1-207ENST00000493359 POTEB3A0JP26 581 aa9.35□□□□□ -0.91
NCKAP1-207ENST00000493359 POTEBQ6S5H4 581 aa9.35□□□□□ -0.91
NCKAP1-207ENST00000493359 FBXW7Q969H0 707 aa9.35□□□□□ -0.91
NCKAP1-207ENST00000493359 HS3ST6Q96QI5 342 aa9.35□□□□□ -0.91
NCKAP1-207ENST00000493359 SLC52A1Q9NWF4 448 aa9.35□□□□□ -0.91
NCKAP1-207ENST00000493359 ERBB3P21860 1342 aa9.34□□□□□ -0.91
NCKAP1-207ENST00000493359 RPGRIP1LQ68CZ1 1315 aa9.34□□□□□ -0.91
NCKAP1-207ENST00000493359 SPATA31D1Q6ZQQ2 1576 aa9.34□□□□□ -0.91
NCKAP1-207ENST00000493359 OATP04181 439 aa9.34□□□□□ -0.91
NCKAP1-207ENST00000493359 BEGAINQ9BUH8 593 aa9.34□□□□□ -0.91
NCKAP1-207ENST00000493359 TMUB1Q9BVT8 246 aa9.34□□□□□ -0.91
NCKAP1-207ENST00000493359 C1orf115Q9H7X2 142 aa9.34□□□□□ -0.91
NCKAP1-207ENST00000493359 KIAA1210Q9ULL0 1709 aa9.34□□□□□ -0.92
NCKAP1-207ENST00000493359 ONECUT3O60422 494 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1-207ENST00000493359 SKIV2LQ15477 1246 aaKnown RBP9.33□□□□□ -0.92
NCKAP1-207ENST00000493359 PHOX2BQ99453 314 aa9.33□□□□□ -0.92
NCKAP1-207ENST00000493359 GPRASP1Q5JY77 1395 aa9.33□□□□□ -0.92
NCKAP1-207ENST00000493359 POLR1AO95602 1720 aaPredicted RBP9.33□□□□□ -0.92
NCKAP1-207ENST00000493359 PPLO60437 1756 aa9.32□□□□□ -0.92
NCKAP1-207ENST00000493359 DDX10Q13206 875 aaKnown RBP9.32□□□□□ -0.92
NCKAP1-207ENST00000493359 VARS2Q5ST30 1063 aaKnown RBP9.32□□□□□ -0.92
NCKAP1-207ENST00000493359 CERKQ8TCT0 537 aa9.32□□□□□ -0.92
NCKAP1-207ENST00000493359 CLUAP1Q96AJ1 413 aa9.32□□□□□ -0.92
NCKAP1-207ENST00000493359 PODXL2Q9NZ53 605 aa9.32□□□□□ -0.92
NCKAP1-207ENST00000493359 EIF3AQ14152 1382 aaKnown RBP9.32□□□□□ -0.92
NCKAP1-207ENST00000493359 NEXMIFQ5QGS0 1516 aa9.31□□□□□ -0.92
NCKAP1-207ENST00000493359 A6NJR5 290 aa9.31□□□□□ -0.92
NCKAP1-207ENST00000493359 FAM161AQ3B820 660 aa9.31□□□□□ -0.92
NCKAP1-207ENST00000493359 METTL3Q86U44 580 aaKnown RBP9.31□□□□□ -0.92
NCKAP1-207ENST00000493359 CDAN1Q8IWY9 1227 aa9.31□□□□□ -0.92
NCKAP1-207ENST00000493359 ZMYM3Q14202 1370 aa9.31□□□□□ -0.92
NCKAP1-207ENST00000493359 CCDC7Q96M83 1385 aa9.31□□□□□ -0.92
NCKAP1-207ENST00000493359 FER1L4A9Z1Z3 1794 aa9.31□□□□□ -0.92
NCKAP1-207ENST00000493359 TMEM131LA2VDJ0 1609 aa9.31□□□□□ -0.92
NCKAP1-207ENST00000493359 IQGAP1P46940 1657 aa9.3□□□□□ -0.92
NCKAP1-207ENST00000493359 NRXN1Q9ULB1 1477 aa9.3□□□□□ -0.92
NCKAP1-207ENST00000493359 FBXO31Q5XUX0 539 aaPredicted RBP9.3□□□□□ -0.92
NCKAP1-207ENST00000493359 POLR3EQ9NVU0 708 aa9.3□□□□□ -0.92
NCKAP1-207ENST00000493359 SCAF11Q99590 1463 aaKnown RBP9.29□□□□□ -0.92
NCKAP1-207ENST00000493359 TNRQ92752 1358 aa9.29□□□□□ -0.92
NCKAP1-207ENST00000493359 TRAK2O60296 914 aa9.29□□□□□ -0.92
NCKAP1-207ENST00000493359 IDI1Q13907 227 aa9.29□□□□□ -0.92
NCKAP1-207ENST00000493359 MCM6Q14566 821 aa9.29□□□□□ -0.92
NCKAP1-207ENST00000493359 NBPF1Q3BBV0 1214 aa9.29□□□□□ -0.92
NCKAP1-207ENST00000493359 FAM217BQ9NTX9 383 aaPredicted RBP9.29□□□□□ -0.92
NCKAP1-207ENST00000493359 LHX6Q9UPM6 363 aa9.29□□□□□ -0.92
NCKAP1-207ENST00000493359 PIK3C2GO75747 1445 aa9.29□□□□□ -0.92
NCKAP1-207ENST00000493359 WASHC2AQ641Q2 1341 aa9.29□□□□□ -0.92
NCKAP1-207ENST00000493359 ADGRF5Q8IZF2 1346 aa9.29□□□□□ -0.92
NCKAP1-207ENST00000493359 SETBP1Q9Y6X0 1596 aa9.29□□□□□ -0.92
NCKAP1-207ENST00000493359 PADI6Q6TGC4 694 aa9.28□□□□□ -0.92
NCKAP1-207ENST00000493359 NLRP7Q8WX94 980 aa9.28□□□□□ -0.92
NCKAP1-207ENST00000493359 POLR3GLQ9BT43 218 aa9.28□□□□□ -0.92
NCKAP1-207ENST00000493359 CFAP65Q6ZU64 1925 aaKnown RBP9.28□□□□□ -0.92
NCKAP1-207ENST00000493359 KIF7Q2M1P5 1343 aa9.28□□□□□ -0.92
NCKAP1-207ENST00000493359 ST20-MTHFSA0A0A6YYL1 179 aa9.27□□□□□ -0.93
NCKAP1-207ENST00000493359 ANP32CO43423 234 aa9.27□□□□□ -0.93
NCKAP1-207ENST00000493359 RAD21O60216 631 aa9.27□□□□□ -0.93
NCKAP1-207ENST00000493359 C6orf132Q5T0Z8 1188 aa9.27□□□□□ -0.93
NCKAP1-207ENST00000493359 PROCA1Q8NCQ7 364 aaPredicted RBP9.27□□□□□ -0.93
NCKAP1-207ENST00000493359 C3P01024 1663 aa9.26□□□□□ -0.93
NCKAP1-207ENST00000493359 ZFYVE9O95405 1425 aa9.26□□□□□ -0.93
NCKAP1-207ENST00000493359 KDM4FA0A1W2PPD8 638 aa9.26□□□□□ -0.93
NCKAP1-207ENST00000493359 ZNF454Q8N9F8 522 aa9.26□□□□□ -0.93
NCKAP1-207ENST00000493359 PXYLP1Q8TE99 480 aa9.26□□□□□ -0.93
NCKAP1-207ENST00000493359 ZDHHC16Q969W1 377 aa9.26□□□□□ -0.93
NCKAP1-207ENST00000493359 A2ML1A8K2U0 1454 aa9.26□□□□□ -0.93
NCKAP1-207ENST00000493359 NLRP1Q9C000 1473 aa9.26□□□□□ -0.93
NCKAP1-207ENST00000493359 KDM5AP29375 1690 aaKnown RBP9.26□□□□□ -0.93
NCKAP1-207ENST00000493359 RIMS2Q9UQ26 1411 aa9.25□□□□□ -0.93
NCKAP1-207ENST00000493359 FOSBP53539 338 aa9.25□□□□□ -0.93
NCKAP1-207ENST00000493359 TMF1P82094 1093 aa9.25□□□□□ -0.93
NCKAP1-207ENST00000493359 CFAP70Q5T0N1 1121 aa9.25□□□□□ -0.93
NCKAP1-207ENST00000493359 ADGRG1Q9Y653 693 aa9.25□□□□□ -0.93
NCKAP1-207ENST00000493359 MYO5BQ9ULV0 1848 aa9.25□□□□□ -0.93
NCKAP1-207ENST00000493359 RIMS1Q86UR5 1692 aaKnown RBP9.24□□□□□ -0.93
NCKAP1-207ENST00000493359 HDGFP51858 240 aaKnown RBP9.24□□□□□ -0.93
NCKAP1-207ENST00000493359 DIXDC1Q155Q3 683 aa9.24□□□□□ -0.93
NCKAP1-207ENST00000493359 CCDC82Q8N4S0 544 aa9.24□□□□□ -0.93
NCKAP1-207ENST00000493359 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.24□□□□□ -0.93
NCKAP1-207ENST00000493359 RBM46Q8TBY0 533 aaKnown RBP9.24□□□□□ -0.93
NCKAP1-207ENST00000493359 MYO3AQ8NEV4 1616 aa9.23□□□□□ -0.93
NCKAP1-207ENST00000493359 C11orf95C9JLR9 678 aaPredicted RBP9.23□□□□□ -0.93
NCKAP1-207ENST00000493359 CLK2P49760 499 aaKnown RBP9.23□□□□□ -0.93
NCKAP1-207ENST00000493359 CDCA8Q53HL2 280 aa9.23□□□□□ -0.93
NCKAP1-207ENST00000493359 NUTM2DQ5VT03 806 aaPredicted RBP9.23□□□□□ -0.93
NCKAP1-207ENST00000493359 MYSM1Q5VVJ2 828 aa9.23□□□□□ -0.93
NCKAP1-207ENST00000493359 PROSER2Q86WR7 435 aaPredicted RBP9.23□□□□□ -0.93
NCKAP1-207ENST00000493359 C14orf93Q9H972 538 aaKnown RBP9.23□□□□□ -0.93
NCKAP1-207ENST00000493359 RBM27Q9P2N5 1060 aaKnown RBP9.23□□□□□ -0.93
NCKAP1-207ENST00000493359 UBR1Q8IWV7 1749 aa9.22□□□□□ -0.93
NCKAP1-207ENST00000493359 ADGRB1O14514 1584 aa9.22□□□□□ -0.93
NCKAP1-207ENST00000493359 PCDH10Q9P2E7 1040 aa9.21□□□□□ -0.94
NCKAP1-207ENST00000493359 DISP3Q9P2K9 1392 aa9.21□□□□□ -0.94
NCKAP1-207ENST00000493359 ADAMTSL3P82987 1691 aa9.2□□□□□ -0.94
NCKAP1-207ENST00000493359 QRICH2Q9H0J4 1663 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms