RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 EDC4Q6P2E9 1401 aaKnown RBP12.56□□□□□ -0.4
TM4SF1-203ENST00000493298 NLRP13Q86W25 1043 aa12.56□□□□□ -0.4
TM4SF1-203ENST00000493298 ZNF692Q9BU19 519 aaPredicted RBP12.56□□□□□ -0.4
TM4SF1-203ENST00000493298 PANK3Q9H999 370 aa12.56□□□□□ -0.4
TM4SF1-203ENST00000493298 AXIN2Q9Y2T1 843 aa12.56□□□□□ -0.4
TM4SF1-203ENST00000493298 TTC21AQ8NDW8 1320 aa12.56□□□□□ -0.4
TM4SF1-203ENST00000493298 FAM98CQ17RN3 349 aaKnown RBP12.55□□□□□ -0.4
TM4SF1-203ENST00000493298 ARHGEF25Q86VW2 580 aa12.55□□□□□ -0.4
TM4SF1-203ENST00000493298 NLRP6P59044 892 aa12.54□□□□□ -0.4
TM4SF1-203ENST00000493298 LARP1Q6PKG0 1096 aaKnown RBP12.54□□□□□ -0.4
TM4SF1-203ENST00000493298 RREB1Q92766 1687 aa12.54□□□□□ -0.4
TM4SF1-203ENST00000493298 ANKRD26Q9UPS8 1709 aa12.54□□□□□ -0.4
TM4SF1-203ENST00000493298 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
TM4SF1-203ENST00000493298 NME9Q86XW9 330 aa12.53□□□□□ -0.4
TM4SF1-203ENST00000493298 POLR3GLQ9BT43 218 aa12.53□□□□□ -0.4
TM4SF1-203ENST00000493298 FAM208AQ9UK61 1670 aaKnown RBP12.53□□□□□ -0.4
TM4SF1-203ENST00000493298 SHANK3Q9BYB0 1731 aa12.53□□□□□ -0.4
TM4SF1-203ENST00000493298 NINLQ9Y2I6 1382 aa12.53□□□□□ -0.4
TM4SF1-203ENST00000493298 DISP2A7MBM2 1401 aa12.53□□□□□ -0.4
TM4SF1-203ENST00000493298 CRB1P82279 1406 aa12.53□□□□□ -0.4
TM4SF1-203ENST00000493298 AMER1Q5JTC6 1135 aaPredicted RBP12.52□□□□□ -0.41
TM4SF1-203ENST00000493298 BARGINQ6ZT62 677 aa12.52□□□□□ -0.41
TM4SF1-203ENST00000493298 KRT27Q7Z3Y8 459 aa12.51□□□□□ -0.41
TM4SF1-203ENST00000493298 ANKRD36BQ8N2N9 1353 aa12.51□□□□□ -0.41
TM4SF1-203ENST00000493298 CCDC184Q52MB2 194 aa12.5□□□□□ -0.41
TM4SF1-203ENST00000493298 FAM182BQ5T319 152 aa12.5□□□□□ -0.41
TM4SF1-203ENST00000493298 NUP188Q5SRE5 1749 aa12.5□□□□□ -0.41
TM4SF1-203ENST00000493298 RGPD3A6NKT7 1758 aaPredicted RBP12.5□□□□□ -0.41
TM4SF1-203ENST00000493298 RGPD4Q7Z3J3 1758 aa12.5□□□□□ -0.41
TM4SF1-203ENST00000493298 STRN4Q9NRL3 753 aa12.49□□□□□ -0.41
TM4SF1-203ENST00000493298 WDR17Q8IZU2 1322 aa12.48□□□□□ -0.41
TM4SF1-203ENST00000493298 SLC24A1O60721 1099 aa12.48□□□□□ -0.41
TM4SF1-203ENST00000493298 CCDC125Q86Z20 511 aa12.48□□□□□ -0.41
TM4SF1-203ENST00000493298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.48□□□□□ -0.41
TM4SF1-203ENST00000493298 CCDC9Q9Y3X0 531 aaKnown RBP12.48□□□□□ -0.41
TM4SF1-203ENST00000493298 MAP2P11137 1827 aaKnown RBP12.48□□□□□ -0.41
TM4SF1-203ENST00000493298 CDCA8Q53HL2 280 aa12.47□□□□□ -0.41
TM4SF1-203ENST00000493298 DEFB132Q7Z7B7 95 aa12.47□□□□□ -0.41
TM4SF1-203ENST00000493298 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
TM4SF1-203ENST00000493298 PRKRIP1Q9H875 184 aaPredicted RBP12.47□□□□□ -0.41
TM4SF1-203ENST00000493298 KCNH5Q8NCM2 988 aa12.46□□□□□ -0.41
TM4SF1-203ENST00000493298 TMC1Q8TDI8 760 aa12.46□□□□□ -0.41
TM4SF1-203ENST00000493298 PARD3Q8TEW0 1356 aa12.45□□□□□ -0.42
TM4SF1-203ENST00000493298 ERBB3P21860 1342 aa12.45□□□□□ -0.42
TM4SF1-203ENST00000493298 FBLN1P23142 703 aa12.45□□□□□ -0.42
TM4SF1-203ENST00000493298 TERF2IPQ9NYB0 399 aa12.45□□□□□ -0.42
TM4SF1-203ENST00000493298 USP35Q9P2H5 1018 aa12.45□□□□□ -0.42
TM4SF1-203ENST00000493298 THRAP3Q9Y2W1 955 aaKnown RBP12.45□□□□□ -0.42
TM4SF1-203ENST00000493298 BCL9O00512 1426 aa12.45□□□□□ -0.42
TM4SF1-203ENST00000493298 NSD3Q9BZ95 1437 aa12.45□□□□□ -0.42
TM4SF1-203ENST00000493298 FYB1O15117 783 aa12.44□□□□□ -0.42
TM4SF1-203ENST00000493298 NPC1L1Q9UHC9 1359 aa12.43□□□□□ -0.42
TM4SF1-203ENST00000493298 NHSQ6T4R5 1651 aa12.43□□□□□ -0.42
TM4SF1-203ENST00000493298 HDGFL2Q7Z4V5 671 aaPredicted RBP12.43□□□□□ -0.42
TM4SF1-203ENST00000493298 SOX12O15370 315 aa12.42□□□□□ -0.42
TM4SF1-203ENST00000493298 EVA1CP58658 441 aa12.42□□□□□ -0.42
TM4SF1-203ENST00000493298 CARD10Q9BWT7 1032 aa12.42□□□□□ -0.42
TM4SF1-203ENST00000493298 MAP3K19Q56UN5 1328 aa12.41□□□□□ -0.42
TM4SF1-203ENST00000493298 LRP5O75197 1615 aa12.41□□□□□ -0.42
TM4SF1-203ENST00000493298 TNS2Q63HR2 1409 aa12.41□□□□□ -0.42
TM4SF1-203ENST00000493298 PTF1AQ7RTS3 328 aa12.41□□□□□ -0.42
TM4SF1-203ENST00000493298 BTAF1O14981 1849 aa12.41□□□□□ -0.42
TM4SF1-203ENST00000493298 CC2D1BQ5T0F9 858 aaKnown RBP12.4□□□□□ -0.42
TM4SF1-203ENST00000493298 MARCH10Q8NA82 808 aaPredicted RBP12.4□□□□□ -0.42
TM4SF1-203ENST00000493298 CAMKK2Q96RR4 588 aa12.4□□□□□ -0.42
TM4SF1-203ENST00000493298 KAT6BQ8WYB5 2073 aa12.39□□□□□ -0.43
TM4SF1-203ENST00000493298 OVOS2A0A0G2JMS6 1433 aa12.39□□□□□ -0.43
TM4SF1-203ENST00000493298 NCAPD2Q15021 1401 aa12.39□□□□□ -0.43
TM4SF1-203ENST00000493298 FAM196AQ6ZSG2 479 aa12.39□□□□□ -0.43
TM4SF1-203ENST00000493298 TOM1L2Q6ZVM7 507 aa12.39□□□□□ -0.43
TM4SF1-203ENST00000493298 IP6K1Q92551 441 aa12.39□□□□□ -0.43
TM4SF1-203ENST00000493298 PKD1L3Q7Z443 1732 aa12.39□□□□□ -0.43
TM4SF1-203ENST00000493298 PAPPAQ13219 1627 aa12.38□□□□□ -0.43
TM4SF1-203ENST00000493298 A0A0G2JS52 829 aa12.38□□□□□ -0.43
TM4SF1-203ENST00000493298 ZBTB7CA1YPR0 619 aa12.38□□□□□ -0.43
TM4SF1-203ENST00000493298 MYT1Q01538 1121 aa12.38□□□□□ -0.43
TM4SF1-203ENST00000493298 CNGB1Q14028 1251 aaPredicted RBP12.38□□□□□ -0.43
TM4SF1-203ENST00000493298 MEGF6O75095 1541 aa12.37□□□□□ -0.43
TM4SF1-203ENST00000493298 DOT1LQ8TEK3 1739 aa12.37□□□□□ -0.43
TM4SF1-203ENST00000493298 TRIM37O94972 964 aa12.37□□□□□ -0.43
TM4SF1-203ENST00000493298 HOXC9P31274 260 aa12.37□□□□□ -0.43
TM4SF1-203ENST00000493298 EN1Q05925 392 aaPredicted RBP12.37□□□□□ -0.43
TM4SF1-203ENST00000493298 GGNBP2Q9H3C7 697 aa12.37□□□□□ -0.43
TM4SF1-203ENST00000493298 RTL1A6NKG5 1358 aa12.37□□□□□ -0.43
TM4SF1-203ENST00000493298 CASZ1Q86V15 1759 aa12.37□□□□□ -0.43
TM4SF1-203ENST00000493298 TOGARAM1Q9Y4F4 1720 aa12.37□□□□□ -0.43
TM4SF1-203ENST00000493298 PPP2R1AP30153 589 aa12.36□□□□□ -0.43
TM4SF1-203ENST00000493298 ANKRD24Q8TF21 1146 aa12.36□□□□□ -0.43
TM4SF1-203ENST00000493298 KNSTRNQ9Y448 316 aa12.36□□□□□ -0.43
TM4SF1-203ENST00000493298 LY75O60449 1722 aa12.35□□□□□ -0.43
TM4SF1-203ENST00000493298 CCER2I3L3R5 266 aa12.35□□□□□ -0.43
TM4SF1-203ENST00000493298 ANP32CO43423 234 aa12.35□□□□□ -0.43
TM4SF1-203ENST00000493298 RRS1Q15050 365 aaKnown RBP12.35□□□□□ -0.43
TM4SF1-203ENST00000493298 EZH2Q15910 746 aaKnown RBP12.35□□□□□ -0.43
TM4SF1-203ENST00000493298 COG3Q96JB2 828 aa12.35□□□□□ -0.43
TM4SF1-203ENST00000493298 ITGB4P16144 1822 aa12.34□□□□□ -0.43
TM4SF1-203ENST00000493298 TUBGCP6Q96RT7 1819 aa12.34□□□□□ -0.43
TM4SF1-203ENST00000493298 PDE3BQ13370 1112 aa12.34□□□□□ -0.43
TM4SF1-203ENST00000493298 DDB1Q16531 1140 aa12.34□□□□□ -0.43
TM4SF1-203ENST00000493298 PROM2Q8N271 834 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms