RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 STRN4Q9NRL3 753 aa23.04■■□□□ 1.28
RER1-208ENST00000493207 AXIN2Q9Y2T1 843 aa23.04■■□□□ 1.28
RER1-208ENST00000493207 COL5A2P05997 1499 aaPredicted RBP23.04■■□□□ 1.28
RER1-208ENST00000493207 TNNT2P45379 298 aaPredicted RBP23.03■■□□□ 1.28
RER1-208ENST00000493207 MAP3K19Q56UN5 1328 aa23.03■■□□□ 1.28
RER1-208ENST00000493207 EVA1CP58658 441 aa23.02■■□□□ 1.28
RER1-208ENST00000493207 CNGB1Q14028 1251 aaPredicted RBP23.02■■□□□ 1.28
RER1-208ENST00000493207 CC2D1BQ5T0F9 858 aaKnown RBP23.02■■□□□ 1.28
RER1-208ENST00000493207 MORC1Q86VD1 984 aa23.02■■□□□ 1.28
RER1-208ENST00000493207 ZNF316A6NFI3 1004 aaPredicted RBP23.01■■□□□ 1.27
RER1-208ENST00000493207 DDX10Q13206 875 aaKnown RBP23.01■■□□□ 1.27
RER1-208ENST00000493207 VPS72Q15906 364 aa23.01■■□□□ 1.27
RER1-208ENST00000493207 CCDC9Q9Y3X0 531 aaKnown RBP23.01■■□□□ 1.27
RER1-208ENST00000493207 PEAK1Q9H792 1746 aa23.01■■□□□ 1.27
RER1-208ENST00000493207 RXRBP28702 533 aa23■■□□□ 1.27
RER1-208ENST00000493207 AMPHP49418 695 aa23■■□□□ 1.27
RER1-208ENST00000493207 GLI3P10071 1580 aa23■■□□□ 1.27
RER1-208ENST00000493207 NPC1L1Q9UHC9 1359 aa22.99■■□□□ 1.27
RER1-208ENST00000493207 RBM6P78332 1123 aaKnown RBP22.98■■□□□ 1.27
RER1-208ENST00000493207 LARP1Q6PKG0 1096 aaKnown RBP22.98■■□□□ 1.27
RER1-208ENST00000493207 IP6K1Q92551 441 aa22.98■■□□□ 1.27
RER1-208ENST00000493207 GJD4Q96KN9 370 aaPredicted RBP22.98■■□□□ 1.27
RER1-208ENST00000493207 RTL1A6NKG5 1358 aa22.98■■□□□ 1.27
RER1-208ENST00000493207 HOXC9P31274 260 aa22.97■■□□□ 1.27
RER1-208ENST00000493207 EMILIN1Q9Y6C2 1016 aa22.97■■□□□ 1.27
RER1-208ENST00000493207 BLMP54132 1417 aaPredicted RBP22.97■■□□□ 1.27
RER1-208ENST00000493207 PPM1GO15355 546 aaPredicted RBP22.95■■□□□ 1.26
RER1-208ENST00000493207 SPATA31A5Q5VU36 1347 aa22.95■■□□□ 1.26
RER1-208ENST00000493207 SPATA31A7Q8IWB4 1347 aa22.95■■□□□ 1.26
RER1-208ENST00000493207 CRB1P82279 1406 aa22.94■■□□□ 1.26
RER1-208ENST00000493207 FLT4P35916 1363 aa22.94■■□□□ 1.26
RER1-208ENST00000493207 WDR17Q8IZU2 1322 aa22.94■■□□□ 1.26
RER1-208ENST00000493207 CSB-PGBD3P0DP91 1061 aa22.94■■□□□ 1.26
RER1-208ENST00000493207 ILDR2Q71H61 639 aa22.94■■□□□ 1.26
RER1-208ENST00000493207 POLKQ9UBT6 870 aa22.94■■□□□ 1.26
RER1-208ENST00000493207 KIF24Q5T7B8 1368 aa22.93■■□□□ 1.26
RER1-208ENST00000493207 ERBB3P21860 1342 aa22.93■■□□□ 1.26
RER1-208ENST00000493207 SPATA31A1Q5TZJ5 1347 aa22.93■■□□□ 1.26
RER1-208ENST00000493207 ANKRD24Q8TF21 1146 aa22.93■■□□□ 1.26
RER1-208ENST00000493207 USP35Q9P2H5 1018 aa22.93■■□□□ 1.26
RER1-208ENST00000493207 TOM1L2Q6ZVM7 507 aa22.92■■□□□ 1.26
RER1-208ENST00000493207 LTV1Q96GA3 475 aaPredicted RBP22.92■■□□□ 1.26
RER1-208ENST00000493207 FAM208AQ9UK61 1670 aaKnown RBP22.92■■□□□ 1.26
RER1-208ENST00000493207 RGPD2P0DJD1 1756 aa22.91■■□□□ 1.26
RER1-208ENST00000493207 CDK12Q9NYV4 1490 aaPredicted RBP22.91■■□□□ 1.26
RER1-208ENST00000493207 RGS12O14924 1447 aa22.91■■□□□ 1.26
RER1-208ENST00000493207 HSP90AB2PQ58FF8 381 aa22.9■■□□□ 1.26
RER1-208ENST00000493207 SMG6Q86US8 1419 aaKnown RBP22.9■■□□□ 1.26
RER1-208ENST00000493207 INSRP06213 1382 aa22.89■■□□□ 1.26
RER1-208ENST00000493207 FAM98CQ17RN3 349 aaKnown RBP22.89■■□□□ 1.25
RER1-208ENST00000493207 WNK3Q9BYP7 1800 aa22.89■■□□□ 1.25
RER1-208ENST00000493207 TCP11L2Q8N4U5 519 aa22.87■■□□□ 1.25
RER1-208ENST00000493207 NLRP2Q9NX02 1062 aa22.87■■□□□ 1.25
RER1-208ENST00000493207 BRWD3Q6RI45 1802 aa22.86■■□□□ 1.25
RER1-208ENST00000493207 THSD7AQ9UPZ6 1657 aa22.86■■□□□ 1.25
RER1-208ENST00000493207 A0A0G2JS52 829 aa22.85■■□□□ 1.25
RER1-208ENST00000493207 MYT1Q01538 1121 aa22.85■■□□□ 1.25
RER1-208ENST00000493207 CARD10Q9BWT7 1032 aa22.85■■□□□ 1.25
RER1-208ENST00000493207 THRAP3Q9Y2W1 955 aaKnown RBP22.85■■□□□ 1.25
RER1-208ENST00000493207 ONECUT3O60422 494 aaPredicted RBP22.84■■□□□ 1.25
RER1-208ENST00000493207 MTHFSP49914 203 aa22.83■■□□□ 1.25
RER1-208ENST00000493207 BARGINQ6ZT62 677 aa22.83■■□□□ 1.25
RER1-208ENST00000493207 SEPT12Q8IYM1 358 aa22.83■■□□□ 1.25
RER1-208ENST00000493207 PARD3Q8TEW0 1356 aa22.81■■□□□ 1.24
RER1-208ENST00000493207 PARP4Q9UKK3 1724 aaKnown RBP22.8■■□□□ 1.24
RER1-208ENST00000493207 EIF4A2Q14240 407 aaKnown RBP22.79■■□□□ 1.24
RER1-208ENST00000493207 NBPF6Q5VWK0 638 aa22.79■■□□□ 1.24
RER1-208ENST00000493207 NBPF4Q96M43 638 aa22.79■■□□□ 1.24
RER1-208ENST00000493207 LRRC37A3O60309 1634 aa22.79■■□□□ 1.24
RER1-208ENST00000493207 PPP2R1AP30153 589 aa22.78■■□□□ 1.24
RER1-208ENST00000493207 USHBP1Q8N6Y0 703 aa22.78■■□□□ 1.24
RER1-208ENST00000493207 DISP2A7MBM2 1401 aa22.77■■□□□ 1.24
RER1-208ENST00000493207 RALBP1Q15311 655 aa22.75■■□□□ 1.23
RER1-208ENST00000493207 IL2RBP14784 551 aa22.74■■□□□ 1.23
RER1-208ENST00000493207 EYA1Q99502 592 aa22.74■■□□□ 1.23
RER1-208ENST00000493207 CDCA7Q9BWT1 371 aaPredicted RBP22.74■■□□□ 1.23
RER1-208ENST00000493207 COL3A1P02461 1466 aaPredicted RBP22.73■■□□□ 1.23
RER1-208ENST00000493207 KRT27Q7Z3Y8 459 aa22.73■■□□□ 1.23
RER1-208ENST00000493207 RGPD1P0DJD0 1748 aa22.73■■□□□ 1.23
RER1-208ENST00000493207 IL13P35225 146 aa22.71■■□□□ 1.23
RER1-208ENST00000493207 DDB1Q16531 1140 aa22.71■■□□□ 1.23
RER1-208ENST00000493207 NCAPD2Q15021 1401 aa22.71■■□□□ 1.23
RER1-208ENST00000493207 MEGF6O75095 1541 aa22.71■■□□□ 1.23
RER1-208ENST00000493207 DIAPH1O60610 1272 aaKnown RBP22.7■■□□□ 1.22
RER1-208ENST00000493207 CFAP53Q96M91 514 aa22.7■■□□□ 1.22
RER1-208ENST00000493207 IGSF1Q8N6C5 1336 aa22.69■■□□□ 1.22
RER1-208ENST00000493207 PDE3BQ13370 1112 aa22.69■■□□□ 1.22
RER1-208ENST00000493207 PRKRIP1Q9H875 184 aaPredicted RBP22.69■■□□□ 1.22
RER1-208ENST00000493207 EP400Q96L91 3159 aa22.69■■□□□ 1.22
RER1-208ENST00000493207 TNS2Q63HR2 1409 aa22.68■■□□□ 1.22
RER1-208ENST00000493207 FAM182BQ5T319 152 aa22.68■■□□□ 1.22
RER1-208ENST00000493207 RAPGEF4Q8WZA2 1011 aa22.68■■□□□ 1.22
RER1-208ENST00000493207 MYBBP1AQ9BQG0 1328 aaKnown RBP22.67■■□□□ 1.22
RER1-208ENST00000493207 EXOC5O00471 708 aa22.67■■□□□ 1.22
RER1-208ENST00000493207 SHANK3Q9BYB0 1731 aa22.67■■□□□ 1.22
RER1-208ENST00000493207 OVOS2A0A0G2JMS6 1433 aa22.66■■□□□ 1.22
RER1-208ENST00000493207 TATP17735 454 aaPredicted RBP22.66■■□□□ 1.22
RER1-208ENST00000493207 PKD1L3Q7Z443 1732 aa22.63■■□□□ 1.21
RER1-208ENST00000493207 SULT6B1Q6IMI4 303 aa22.63■■□□□ 1.21
RER1-208ENST00000493207 AEBP1Q8IUX7 1158 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms