RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 GJD4Q96KN9 370 aaPredicted RBP11.05□□□□□ -0.64
TPR-208ENST00000492973 WNT7BP56706 349 aa11.04□□□□□ -0.64
TPR-208ENST00000492973 SKOR1P84550 965 aa11.04□□□□□ -0.64
TPR-208ENST00000492973 CYB5RLQ6IPT4 315 aa11.04□□□□□ -0.64
TPR-208ENST00000492973 BAP1Q92560 729 aa11.03□□□□□ -0.64
TPR-208ENST00000492973 TNIKQ9UKE5 1360 aa11.03□□□□□ -0.64
TPR-208ENST00000492973 CARMIL2Q6F5E8 1435 aa11.02□□□□□ -0.64
TPR-208ENST00000492973 RANGAP1P46060 587 aaPredicted RBP11.02□□□□□ -0.65
TPR-208ENST00000492973 SH3BP2P78314 561 aa11.02□□□□□ -0.65
TPR-208ENST00000492973 ZNF511Q8NB15 262 aa11.02□□□□□ -0.65
TPR-208ENST00000492973 ARMC2Q8NEN0 867 aa11.02□□□□□ -0.65
TPR-208ENST00000492973 MCM6Q14566 821 aa11.01□□□□□ -0.65
TPR-208ENST00000492973 LINC01559Q495D7 138 aa11.01□□□□□ -0.65
TPR-208ENST00000492973 TRIM67Q6ZTA4 783 aa11.01□□□□□ -0.65
TPR-208ENST00000492973 PKD2L1Q9P0L9 805 aa11.01□□□□□ -0.65
TPR-208ENST00000492973 FKBPLQ9UIM3 349 aa11.01□□□□□ -0.65
TPR-208ENST00000492973 CTTNBP2Q8WZ74 1663 aa11.01□□□□□ -0.65
TPR-208ENST00000492973 PTPRGP23470 1445 aa11□□□□□ -0.65
TPR-208ENST00000492973 WNT7AO00755 349 aa10.99□□□□□ -0.65
TPR-208ENST00000492973 GDF9O60383 454 aa10.99□□□□□ -0.65
TPR-208ENST00000492973 NBPF14Q5TI25 921 aa10.99□□□□□ -0.65
TPR-208ENST00000492973 GPKOWQ92917 476 aaPredicted RBP eCLIP10.99□□□□□ -0.65
TPR-208ENST00000492973 ZC3H4Q9UPT8 1303 aaKnown RBP10.99□□□□□ -0.65
TPR-208ENST00000492973 RC3H1Q5TC82 1133 aaKnown RBP10.98□□□□□ -0.65
TPR-208ENST00000492973 TTBK1Q5TCY1 1321 aaPredicted RBP10.98□□□□□ -0.65
TPR-208ENST00000492973 KIAA0556O60303 1618 aa10.98□□□□□ -0.65
TPR-208ENST00000492973 GPR37L1O60883 481 aa10.97□□□□□ -0.65
TPR-208ENST00000492973 PRR20EP86478 221 aa10.97□□□□□ -0.65
TPR-208ENST00000492973 PRR20CP86479 221 aa10.97□□□□□ -0.65
TPR-208ENST00000492973 PRR20DP86480 221 aa10.97□□□□□ -0.65
TPR-208ENST00000492973 PRR20BP86481 221 aa10.97□□□□□ -0.65
TPR-208ENST00000492973 PRR20AP86496 221 aa10.97□□□□□ -0.65
TPR-208ENST00000492973 SAMD9Q5K651 1589 aa10.96□□□□□ -0.65
TPR-208ENST00000492973 APBB1O00213 710 aa10.96□□□□□ -0.65
TPR-208ENST00000492973 SH3BP5LQ7L8J4 393 aa10.96□□□□□ -0.65
TPR-208ENST00000492973 FOXJ1Q92949 421 aa10.96□□□□□ -0.65
TPR-208ENST00000492973 ARHGAP35Q9NRY4 1499 aa10.95□□□□□ -0.66
TPR-208ENST00000492973 FHOD3Q2V2M9 1422 aa10.95□□□□□ -0.66
TPR-208ENST00000492973 FOXC1Q12948 553 aa10.95□□□□□ -0.66
TPR-208ENST00000492973 PDXDC2PQ6P474 469 aa10.95□□□□□ -0.66
TPR-208ENST00000492973 SH3RF1Q7Z6J0 888 aa10.95□□□□□ -0.66
TPR-208ENST00000492973 PNMA1Q8ND90 353 aa10.95□□□□□ -0.66
TPR-208ENST00000492973 FLIIQ13045 1269 aa10.94□□□□□ -0.66
TPR-208ENST00000492973 C4orf48Q5BLP8 95 aa10.94□□□□□ -0.66
TPR-208ENST00000492973 MRGPRX2Q96LB1 330 aa10.94□□□□□ -0.66
TPR-208ENST00000492973 NDUFB9Q9Y6M9 179 aa10.94□□□□□ -0.66
TPR-208ENST00000492973 EFCAB5A4FU69 1503 aa10.94□□□□□ -0.66
TPR-208ENST00000492973 TNFRSF10AO00220 468 aa10.93□□□□□ -0.66
TPR-208ENST00000492973 BPHLQ86WA6 291 aaPredicted RBP10.93□□□□□ -0.66
TPR-208ENST00000492973 PDZRN3Q9UPQ7 1066 aa10.93□□□□□ -0.66
TPR-208ENST00000492973 CLIP1P30622 1438 aa10.92□□□□□ -0.66
TPR-208ENST00000492973 UACAQ9BZF9 1416 aa10.92□□□□□ -0.66
TPR-208ENST00000492973 SIAH2O43255 324 aa10.92□□□□□ -0.66
TPR-208ENST00000492973 VARSP26640 1264 aaKnown RBP10.92□□□□□ -0.66
TPR-208ENST00000492973 EHBP1Q8NDI1 1231 aa10.92□□□□□ -0.66
TPR-208ENST00000492973 OCSTAMPQ9BR26 566 aa10.92□□□□□ -0.66
TPR-208ENST00000492973 CEP162Q5TB80 1403 aa10.92□□□□□ -0.66
TPR-208ENST00000492973 C1QTNF2Q9BXJ5 285 aa10.91□□□□□ -0.66
TPR-208ENST00000492973 TBC1D2BQ9UPU7 963 aa10.91□□□□□ -0.66
TPR-208ENST00000492973 GPSM3Q9Y4H4 160 aa10.91□□□□□ -0.66
TPR-208ENST00000492973 PLB1Q6P1J6 1458 aa10.91□□□□□ -0.66
TPR-208ENST00000492973 TOR4AQ9NXH8 423 aa10.9□□□□□ -0.66
TPR-208ENST00000492973 UHRF1BP1LA0JNW5 1464 aa10.89□□□□□ -0.67
TPR-208ENST00000492973 AGERQ15109 404 aa10.89□□□□□ -0.67
TPR-208ENST00000492973 IRX2Q9BZI1 471 aaPredicted RBP10.89□□□□□ -0.67
TPR-208ENST00000492973 NRG2O14511 850 aaPredicted RBP10.88□□□□□ -0.67
TPR-208ENST00000492973 GFRA3O60609 400 aa10.88□□□□□ -0.67
TPR-208ENST00000492973 ABCA8O94911 1581 aa10.88□□□□□ -0.67
TPR-208ENST00000492973 PTK2Q05397 1052 aa10.88□□□□□ -0.67
TPR-208ENST00000492973 ARHGAP9Q9BRR9 750 aa10.88□□□□□ -0.67
TPR-208ENST00000492973 ADCY10Q96PN6 1610 aa10.87□□□□□ -0.67
TPR-208ENST00000492973 LAPTM4AQ15012 233 aa10.87□□□□□ -0.67
TPR-208ENST00000492973 MPNDQ8N594 471 aa10.87□□□□□ -0.67
TPR-208ENST00000492973 SNIP1Q8TAD8 396 aaKnown RBP10.87□□□□□ -0.67
TPR-208ENST00000492973 FAM174AQ8TBP5 190 aa10.87□□□□□ -0.67
TPR-208ENST00000492973 GDPD2Q9HCC8 539 aa10.87□□□□□ -0.67
TPR-208ENST00000492973 PRM3Q9NNZ6 103 aa10.87□□□□□ -0.67
TPR-208ENST00000492973 COG6Q9Y2V7 657 aa10.87□□□□□ -0.67
TPR-208ENST00000492973 ABCC2Q92887 1545 aa10.87□□□□□ -0.67
TPR-208ENST00000492973 MAGEB6P1A0A0J9YX57 407 aa10.86□□□□□ -0.67
TPR-208ENST00000492973 ERFEQ4G0M1 354 aa10.86□□□□□ -0.67
TPR-208ENST00000492973 TRMT44Q8IYL2 757 aaKnown RBP10.86□□□□□ -0.67
TPR-208ENST00000492973 CYP4X1Q8N118 509 aa10.86□□□□□ -0.67
TPR-208ENST00000492973 FBXO45P0C2W1 286 aa10.85□□□□□ -0.67
TPR-208ENST00000492973 IRF5Q13568 498 aa10.85□□□□□ -0.67
TPR-208ENST00000492973 CARD14Q9BXL6 1004 aa10.85□□□□□ -0.67
TPR-208ENST00000492973 FMN1Q68DA7 1419 aa10.84□□□□□ -0.67
TPR-208ENST00000492973 ARID3CA6NKF2 412 aa10.84□□□□□ -0.67
TPR-208ENST00000492973 ZBBXA8MT70 800 aa10.84□□□□□ -0.67
TPR-208ENST00000492973 ADAM32Q8TC27 787 aa10.84□□□□□ -0.67
TPR-208ENST00000492973 POM121Q96HA1 1249 aa10.84□□□□□ -0.67
TPR-208ENST00000492973 GTF3C3Q9Y5Q9 886 aa10.84□□□□□ -0.67
TPR-208ENST00000492973 TLL2Q9Y6L7 1015 aa10.84□□□□□ -0.67
TPR-208ENST00000492973 KDM5BQ9UGL1 1544 aa10.84□□□□□ -0.67
TPR-208ENST00000492973 NUP153P49790 1475 aaKnown RBP10.83□□□□□ -0.68
TPR-208ENST00000492973 TTC24A2A3L6 582 aaPredicted RBP10.83□□□□□ -0.68
TPR-208ENST00000492973 ZBTB33Q86T24 672 aa10.83□□□□□ -0.68
TPR-208ENST00000492973 CDK15Q96Q40 435 aa10.83□□□□□ -0.68
TPR-208ENST00000492973 ATP10BO94823 1461 aa10.82□□□□□ -0.68
TPR-208ENST00000492973 J3QL48 77 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms