RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 SPATA31E1Q6ZUB1 1445 aa17.54■□□□□ 0.4
CACNA1C-228ENST00000492150 CPDO75976 1380 aa17.53■□□□□ 0.4
CACNA1C-228ENST00000492150 POLD1P28340 1107 aa17.53■□□□□ 0.4
CACNA1C-228ENST00000492150 ZC3H6P61129 1189 aaKnown RBP17.53■□□□□ 0.4
CACNA1C-228ENST00000492150 CRB1P82279 1406 aa17.53■□□□□ 0.4
CACNA1C-228ENST00000492150 EIF3AQ14152 1382 aaKnown RBP17.53■□□□□ 0.4
CACNA1C-228ENST00000492150 COL5A2P05997 1499 aaPredicted RBP17.52■□□□□ 0.4
CACNA1C-228ENST00000492150 DDB1Q16531 1140 aa17.52■□□□□ 0.4
CACNA1C-228ENST00000492150 KLHL34Q8N239 644 aa17.52■□□□□ 0.4
CACNA1C-228ENST00000492150 TULP4Q9NRJ4 1543 aa17.51■□□□□ 0.39
CACNA1C-228ENST00000492150 ANKRD30BQ9BXX2 1392 aa17.51■□□□□ 0.39
CACNA1C-228ENST00000492150 ARHGEF28Q8N1W1 1705 aaKnown RBP17.5■□□□□ 0.39
CACNA1C-228ENST00000492150 KLRG1Q96E93 195 aa17.5■□□□□ 0.39
CACNA1C-228ENST00000492150 PAK3O75914 559 aaPredicted RBP17.49■□□□□ 0.39
CACNA1C-228ENST00000492150 ZNF526Q8TF50 670 aaPredicted RBP17.48■□□□□ 0.39
CACNA1C-228ENST00000492150 NHSQ6T4R5 1651 aa17.48■□□□□ 0.39
CACNA1C-228ENST00000492150 ITSN1Q15811 1721 aa17.47■□□□□ 0.39
CACNA1C-228ENST00000492150 MARCH10Q8NA82 808 aaPredicted RBP17.46■□□□□ 0.39
CACNA1C-228ENST00000492150 MPHOSPH9Q99550 1183 aa17.46■□□□□ 0.39
CACNA1C-228ENST00000492150 PRR36Q9H6K5 1346 aa17.46■□□□□ 0.38
CACNA1C-228ENST00000492150 TOMM70O94826 608 aa17.45■□□□□ 0.38
CACNA1C-228ENST00000492150 NGDNQ8NEJ9 315 aaKnown RBP17.45■□□□□ 0.38
CACNA1C-228ENST00000492150 WWC3Q9ULE0 1092 aa17.45■□□□□ 0.38
CACNA1C-228ENST00000492150 PCNTO95613 3336 aa17.44■□□□□ 0.38
CACNA1C-228ENST00000492150 ZNF827Q17R98 1081 aa17.44■□□□□ 0.38
CACNA1C-228ENST00000492150 PRAM1Q96QH2 718 aa17.44■□□□□ 0.38
CACNA1C-228ENST00000492150 C14orf93Q9H972 538 aaKnown RBP17.44■□□□□ 0.38
CACNA1C-228ENST00000492150 CDCA7Q9BWT1 371 aaPredicted RBP17.43■□□□□ 0.38
CACNA1C-228ENST00000492150 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
CACNA1C-228ENST00000492150 TUBGCP6Q96RT7 1819 aa17.42■□□□□ 0.38
CACNA1C-228ENST00000492150 USP19O94966 1318 aa17.41■□□□□ 0.38
CACNA1C-228ENST00000492150 SAFB2Q14151 953 aaKnown RBP eCLIP17.4■□□□□ 0.38
CACNA1C-228ENST00000492150 CFAP70Q5T0N1 1121 aa17.4■□□□□ 0.38
CACNA1C-228ENST00000492150 AKT1S1Q96B36 256 aa17.39■□□□□ 0.37
CACNA1C-228ENST00000492150 BTAF1O14981 1849 aa17.38■□□□□ 0.37
CACNA1C-228ENST00000492150 PNPLA7Q6ZV29 1317 aa17.37■□□□□ 0.37
CACNA1C-228ENST00000492150 POGKQ9P215 609 aa17.36■□□□□ 0.37
CACNA1C-228ENST00000492150 NUTM2GQ5VZR2 741 aa17.35■□□□□ 0.37
CACNA1C-228ENST00000492150 WASLO00401 505 aaPredicted RBP17.34■□□□□ 0.37
CACNA1C-228ENST00000492150 CICQ96RK0 1608 aaPredicted RBP17.34■□□□□ 0.37
CACNA1C-228ENST00000492150 LRRC4BQ9NT99 713 aa17.34■□□□□ 0.37
CACNA1C-228ENST00000492150 TRPM1Q7Z4N2 1603 aa17.33■□□□□ 0.37
CACNA1C-228ENST00000492150 POLR3AO14802 1390 aaPredicted RBP17.33■□□□□ 0.36
CACNA1C-228ENST00000492150 RBM46Q8TBY0 533 aaKnown RBP17.33■□□□□ 0.36
CACNA1C-228ENST00000492150 CD2APQ9Y5K6 639 aa17.33■□□□□ 0.36
CACNA1C-228ENST00000492150 GCP02774 474 aa17.32■□□□□ 0.36
CACNA1C-228ENST00000492150 TOM1L2Q6ZVM7 507 aa17.32■□□□□ 0.36
CACNA1C-228ENST00000492150 COL18A1P39060 1754 aa17.32■□□□□ 0.36
CACNA1C-228ENST00000492150 TNS2Q63HR2 1409 aa17.31■□□□□ 0.36
CACNA1C-228ENST00000492150 HIRIP3Q9BW71 556 aaPredicted RBP17.31■□□□□ 0.36
CACNA1C-228ENST00000492150 WDR17Q8IZU2 1322 aa17.3■□□□□ 0.36
CACNA1C-228ENST00000492150 HTRA3P83110 453 aa17.3■□□□□ 0.36
CACNA1C-228ENST00000492150 SLC27A3Q5K4L6 730 aa17.3■□□□□ 0.36
CACNA1C-228ENST00000492150 ABCC6O95255 1503 aa17.3■□□□□ 0.36
CACNA1C-228ENST00000492150 EXOC5O00471 708 aa17.29■□□□□ 0.36
CACNA1C-228ENST00000492150 HSPA1AP0DMV8 641 aaKnown RBP17.29■□□□□ 0.36
CACNA1C-228ENST00000492150 HSPA1BP0DMV9 641 aaKnown RBP17.29■□□□□ 0.36
CACNA1C-228ENST00000492150 FSTL1Q12841 308 aa17.29■□□□□ 0.36
CACNA1C-228ENST00000492150 ABTB2Q8N961 1025 aa17.29■□□□□ 0.36
CACNA1C-228ENST00000492150 USP6P35125 1406 aa17.29■□□□□ 0.36
CACNA1C-228ENST00000492150 ADGRB1O14514 1584 aa17.28■□□□□ 0.36
CACNA1C-228ENST00000492150 NLRP13Q86W25 1043 aa17.27■□□□□ 0.36
CACNA1C-228ENST00000492150 TRAK1Q9UPV9 953 aa17.27■□□□□ 0.36
CACNA1C-228ENST00000492150 PIK3C2AO00443 1686 aa17.26■□□□□ 0.35
CACNA1C-228ENST00000492150 MINK1Q8N4C8 1332 aaPredicted RBP17.26■□□□□ 0.35
CACNA1C-228ENST00000492150 TFCP2L1Q9NZI6 479 aa17.26■□□□□ 0.35
CACNA1C-228ENST00000492150 CARD10Q9BWT7 1032 aa17.25■□□□□ 0.35
CACNA1C-228ENST00000492150 SLIT3O75094 1523 aa17.25■□□□□ 0.35
CACNA1C-228ENST00000492150 KAT6BQ8WYB5 2073 aa17.24■□□□□ 0.35
CACNA1C-228ENST00000492150 NUDT16Q96DE0 195 aaKnown RBP17.24■□□□□ 0.35
CACNA1C-228ENST00000492150 ACSBG1Q96GR2 724 aa17.23■□□□□ 0.35
CACNA1C-228ENST00000492150 LY75O60449 1722 aa17.23■□□□□ 0.35
CACNA1C-228ENST00000492150 ACEP12821 1306 aa17.22■□□□□ 0.35
CACNA1C-228ENST00000492150 CCDC7Q96M83 1385 aa17.22■□□□□ 0.35
CACNA1C-228ENST00000492150 RGPD5Q99666 1765 aa17.21■□□□□ 0.35
CACNA1C-228ENST00000492150 NMRK2Q9NPI5 230 aa17.21■□□□□ 0.35
CACNA1C-228ENST00000492150 C10orf71Q711Q0 1435 aa17.21■□□□□ 0.34
CACNA1C-228ENST00000492150 KDM2AQ9Y2K7 1162 aa17.2■□□□□ 0.34
CACNA1C-228ENST00000492150 PLEKHG3A1L390 1219 aa17.19■□□□□ 0.34
CACNA1C-228ENST00000492150 PPIP5K1Q6PFW1 1433 aa17.19■□□□□ 0.34
CACNA1C-228ENST00000492150 IGSF1Q8N6C5 1336 aa17.19■□□□□ 0.34
CACNA1C-228ENST00000492150 FAM161AQ3B820 660 aa17.18■□□□□ 0.34
CACNA1C-228ENST00000492150 C16orf71Q8IYS4 520 aaPredicted RBP17.18■□□□□ 0.34
CACNA1C-228ENST00000492150 DCAF11Q8TEB1 546 aa17.18■□□□□ 0.34
CACNA1C-228ENST00000492150 AXIN2Q9Y2T1 843 aa17.18■□□□□ 0.34
CACNA1C-228ENST00000492150 RAB3GAP2Q9H2M9 1393 aa17.17■□□□□ 0.34
CACNA1C-228ENST00000492150 CPSF1Q10570 1443 aaKnown RBP17.17■□□□□ 0.34
CACNA1C-228ENST00000492150 KIAA1210Q9ULL0 1709 aa17.17■□□□□ 0.34
CACNA1C-228ENST00000492150 COL23A1Q86Y22 540 aaPredicted RBP17.16■□□□□ 0.34
CACNA1C-228ENST00000492150 CCDC61Q9Y6R9 512 aa17.16■□□□□ 0.34
CACNA1C-228ENST00000492150 ZBTB7CA1YPR0 619 aa17.14■□□□□ 0.33
CACNA1C-228ENST00000492150 STAC3Q96MF2 364 aa17.13■□□□□ 0.33
CACNA1C-228ENST00000492150 TNRC6CQ9HCJ0 1690 aaKnown RBP17.13■□□□□ 0.33
CACNA1C-228ENST00000492150 PLEKHG2Q9H7P9 1386 aa17.13■□□□□ 0.33
CACNA1C-228ENST00000492150 MSL1Q68DK7 614 aa17.12■□□□□ 0.33
CACNA1C-228ENST00000492150 PRDM10Q9NQV6 1147 aa17.12■□□□□ 0.33
CACNA1C-228ENST00000492150 PXDNLA1KZ92 1463 aa17.12■□□□□ 0.33
CACNA1C-228ENST00000492150 MSH5O43196 834 aa17.11■□□□□ 0.33
CACNA1C-228ENST00000492150 CDK19Q9BWU1 502 aa17.11■□□□□ 0.33
CACNA1C-228ENST00000492150 USP54Q70EL1 1684 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms