RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 ABCC6O95255 1503 aa31.59■■■□□ 2.65
SCN5A-213ENST00000491944 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.59■■■□□ 2.65
SCN5A-213ENST00000491944 ZNF772Q68DY9 489 aaPredicted RBP31.58■■■□□ 2.65
SCN5A-213ENST00000491944 UNC5CLQ8IV45 518 aa31.58■■■□□ 2.65
SCN5A-213ENST00000491944 EMILIN1Q9Y6C2 1016 aa31.57■■■□□ 2.64
SCN5A-213ENST00000491944 PPM1GO15355 546 aaPredicted RBP31.56■■■□□ 2.64
SCN5A-213ENST00000491944 AXIN2Q9Y2T1 843 aa31.56■■■□□ 2.64
SCN5A-213ENST00000491944 STRN4Q9NRL3 753 aa31.56■■■□□ 2.64
SCN5A-213ENST00000491944 RGS17Q9UGC6 210 aaPredicted RBP31.56■■■□□ 2.64
SCN5A-213ENST00000491944 PEAK1Q9H792 1746 aa31.55■■■□□ 2.64
SCN5A-213ENST00000491944 RTL1A6NKG5 1358 aa31.55■■■□□ 2.64
SCN5A-213ENST00000491944 EVA1CP58658 441 aa31.55■■■□□ 2.64
SCN5A-213ENST00000491944 IP6K1Q92551 441 aa31.55■■■□□ 2.64
SCN5A-213ENST00000491944 POLKQ9UBT6 870 aa31.55■■■□□ 2.64
SCN5A-213ENST00000491944 HOXC9P31274 260 aa31.54■■■□□ 2.64
SCN5A-213ENST00000491944 COL5A2P05997 1499 aaPredicted RBP31.53■■■□□ 2.64
SCN5A-213ENST00000491944 FLT4P35916 1363 aa31.51■■■□□ 2.64
SCN5A-213ENST00000491944 BLMP54132 1417 aaPredicted RBP31.51■■■□□ 2.63
SCN5A-213ENST00000491944 QTRT2Q9H974 415 aaKnown RBP31.51■■■□□ 2.63
SCN5A-213ENST00000491944 KIF24Q5T7B8 1368 aa31.5■■■□□ 2.63
SCN5A-213ENST00000491944 TRPC5Q9UL62 973 aaPredicted RBP31.5■■■□□ 2.63
SCN5A-213ENST00000491944 CCDC9Q9Y3X0 531 aaKnown RBP31.5■■■□□ 2.63
SCN5A-213ENST00000491944 ATRNO75882 1429 aa31.49■■■□□ 2.63
SCN5A-213ENST00000491944 CSB-PGBD3P0DP91 1061 aa31.48■■■□□ 2.63
SCN5A-213ENST00000491944 LTV1Q96GA3 475 aaPredicted RBP31.47■■■□□ 2.63
SCN5A-213ENST00000491944 PARD3Q8TEW0 1356 aa31.47■■■□□ 2.63
SCN5A-213ENST00000491944 SMG6Q86US8 1419 aaKnown RBP31.47■■■□□ 2.63
SCN5A-213ENST00000491944 VPS72Q15906 364 aa31.46■■■□□ 2.63
SCN5A-213ENST00000491944 HSP90AB2PQ58FF8 381 aa31.46■■■□□ 2.63
SCN5A-213ENST00000491944 LARP1Q6PKG0 1096 aaKnown RBP31.46■■■□□ 2.63
SCN5A-213ENST00000491944 POTEAQ6S8J7 498 aa31.46■■■□□ 2.63
SCN5A-213ENST00000491944 ANKRD24Q8TF21 1146 aa31.46■■■□□ 2.63
SCN5A-213ENST00000491944 INSRP06213 1382 aa31.44■■■□□ 2.62
SCN5A-213ENST00000491944 ERBB3P21860 1342 aa31.44■■■□□ 2.62
SCN5A-213ENST00000491944 WDR17Q8IZU2 1322 aa31.44■■■□□ 2.62
SCN5A-213ENST00000491944 CDK12Q9NYV4 1490 aaPredicted RBP31.44■■■□□ 2.62
SCN5A-213ENST00000491944 MTHFSP49914 203 aa31.43■■■□□ 2.62
SCN5A-213ENST00000491944 RALBP1Q15311 655 aa31.43■■■□□ 2.62
SCN5A-213ENST00000491944 TOM1L2Q6ZVM7 507 aa31.43■■■□□ 2.62
SCN5A-213ENST00000491944 PPP2R1AP30153 589 aa31.41■■■□□ 2.62
SCN5A-213ENST00000491944 CRB1P82279 1406 aa31.4■■■□□ 2.62
SCN5A-213ENST00000491944 FAM208AQ9UK61 1670 aaKnown RBP31.4■■■□□ 2.62
SCN5A-213ENST00000491944 SPATA31A5Q5VU36 1347 aa31.4■■■□□ 2.62
SCN5A-213ENST00000491944 SPATA31A7Q8IWB4 1347 aa31.4■■■□□ 2.62
SCN5A-213ENST00000491944 GJD4Q96KN9 370 aaPredicted RBP31.4■■■□□ 2.62
SCN5A-213ENST00000491944 USP35Q9P2H5 1018 aa31.4■■■□□ 2.62
SCN5A-213ENST00000491944 NLRP2Q9NX02 1062 aa31.39■■■□□ 2.62
SCN5A-213ENST00000491944 GLI3P10071 1580 aa31.38■■■□□ 2.61
SCN5A-213ENST00000491944 SPATA31A1Q5TZJ5 1347 aa31.37■■■□□ 2.61
SCN5A-213ENST00000491944 RGPD2P0DJD1 1756 aa31.37■■■□□ 2.61
SCN5A-213ENST00000491944 RXRBP28702 533 aa31.37■■■□□ 2.61
SCN5A-213ENST00000491944 RBM6P78332 1123 aaKnown RBP31.37■■■□□ 2.61
SCN5A-213ENST00000491944 PRKRIP1Q9H875 184 aaPredicted RBP31.36■■■□□ 2.61
SCN5A-213ENST00000491944 CARD10Q9BWT7 1032 aa31.33■■■□□ 2.61
SCN5A-213ENST00000491944 EIF4A2Q14240 407 aaKnown RBP31.32■■■□□ 2.6
SCN5A-213ENST00000491944 TCP11L2Q8N4U5 519 aa31.32■■■□□ 2.6
SCN5A-213ENST00000491944 ANP32CO43423 234 aa31.31■■■□□ 2.6
SCN5A-213ENST00000491944 MYBBP1AQ9BQG0 1328 aaKnown RBP31.31■■■□□ 2.6
SCN5A-213ENST00000491944 CFAP53Q96M91 514 aa31.3■■■□□ 2.6
SCN5A-213ENST00000491944 FAM98CQ17RN3 349 aaKnown RBP31.3■■■□□ 2.6
SCN5A-213ENST00000491944 NBPF6Q5VWK0 638 aa31.29■■■□□ 2.6
SCN5A-213ENST00000491944 NBPF4Q96M43 638 aa31.29■■■□□ 2.6
SCN5A-213ENST00000491944 THRAP3Q9Y2W1 955 aaKnown RBP31.28■■■□□ 2.6
SCN5A-213ENST00000491944 WNK3Q9BYP7 1800 aa31.27■■■□□ 2.6
SCN5A-213ENST00000491944 COL3A1P02461 1466 aaPredicted RBP31.27■■■□□ 2.6
SCN5A-213ENST00000491944 A0A0G2JS52 829 aa31.27■■■□□ 2.6
SCN5A-213ENST00000491944 MYT1Q01538 1121 aa31.27■■■□□ 2.6
SCN5A-213ENST00000491944 USHBP1Q8N6Y0 703 aa31.27■■■□□ 2.6
SCN5A-213ENST00000491944 DIAPH1O60610 1272 aaKnown RBP31.25■■■□□ 2.59
SCN5A-213ENST00000491944 BARGINQ6ZT62 677 aa31.25■■■□□ 2.59
SCN5A-213ENST00000491944 IL13P35225 146 aa31.24■■■□□ 2.59
SCN5A-213ENST00000491944 EYA1Q99502 592 aa31.24■■■□□ 2.59
SCN5A-213ENST00000491944 RGS12O14924 1447 aa31.22■■■□□ 2.59
SCN5A-213ENST00000491944 THSD7AQ9UPZ6 1657 aa31.22■■■□□ 2.59
SCN5A-213ENST00000491944 RGPD1P0DJD0 1748 aa31.2■■■□□ 2.58
SCN5A-213ENST00000491944 ONECUT3O60422 494 aaPredicted RBP31.19■■■□□ 2.58
SCN5A-213ENST00000491944 SEPT12Q8IYM1 358 aa31.19■■■□□ 2.58
SCN5A-213ENST00000491944 IGSF1Q8N6C5 1336 aa31.19■■■□□ 2.58
SCN5A-213ENST00000491944 IL2RBP14784 551 aa31.17■■■□□ 2.58
SCN5A-213ENST00000491944 DIEXFQ68CQ4 756 aaKnown RBP31.17■■■□□ 2.58
SCN5A-213ENST00000491944 DISP2A7MBM2 1401 aa31.17■■■□□ 2.58
SCN5A-213ENST00000491944 NCAPD2Q15021 1401 aa31.17■■■□□ 2.58
SCN5A-213ENST00000491944 U2SURPO15042 1029 aaKnown RBP31.17■■■□□ 2.58
SCN5A-213ENST00000491944 CDCA7Q9BWT1 371 aaPredicted RBP31.17■■■□□ 2.58
SCN5A-213ENST00000491944 PARP4Q9UKK3 1724 aaKnown RBP31.16■■■□□ 2.58
SCN5A-213ENST00000491944 BRWD3Q6RI45 1802 aa31.15■■■□□ 2.58
SCN5A-213ENST00000491944 RAPGEF4Q8WZA2 1011 aa31.15■■■□□ 2.58
SCN5A-213ENST00000491944 NUDCQ9Y266 331 aa31.15■■■□□ 2.58
SCN5A-213ENST00000491944 MEGF6O75095 1541 aa31.13■■■□□ 2.57
SCN5A-213ENST00000491944 LRRC37A3O60309 1634 aa31.13■■■□□ 2.57
SCN5A-213ENST00000491944 SULT6B1Q6IMI4 303 aa31.12■■■□□ 2.57
SCN5A-213ENST00000491944 AEBP1Q8IUX7 1158 aa31.11■■■□□ 2.57
SCN5A-213ENST00000491944 HMOX1P09601 288 aa31.1■■■□□ 2.57
SCN5A-213ENST00000491944 TATP17735 454 aaPredicted RBP31.1■■■□□ 2.57
SCN5A-213ENST00000491944 DDB1Q16531 1140 aa31.1■■■□□ 2.57
SCN5A-213ENST00000491944 U2AF1L5P0DN76 240 aaPredicted RBP31.07■■■□□ 2.56
SCN5A-213ENST00000491944 U2AF1Q01081 240 aaKnown RBP eCLIP31.07■■■□□ 2.56
SCN5A-213ENST00000491944 ILDR2Q71H61 639 aa31.07■■■□□ 2.56
SCN5A-213ENST00000491944 OVOS2A0A0G2JMS6 1433 aa31.07■■■□□ 2.56
SCN5A-213ENST00000491944 KDRP35968 1356 aa31.07■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms