RNA–Protein interactions for RNA: ENST00000491919.5

CHEK2-224, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 609 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-224ENST00000491919 FAM217BQ9NTX9 383 aaPredicted RBP9.58□□□□□ -0.88
CHEK2-224ENST00000491919 C3P01024 1663 aa9.58□□□□□ -0.88
CHEK2-224ENST00000491919 MINK1Q8N4C8 1332 aaPredicted RBP9.57□□□□□ -0.88
CHEK2-224ENST00000491919 ZMYM4Q5VZL5 1548 aa9.57□□□□□ -0.88
CHEK2-224ENST00000491919 Q3C1V9 767 aa9.57□□□□□ -0.88
CHEK2-224ENST00000491919 TREML4Q6UXN2 200 aa9.57□□□□□ -0.88
CHEK2-224ENST00000491919 SETD1BQ9UPS6 1966 aaKnown RBP9.57□□□□□ -0.88
CHEK2-224ENST00000491919 EFCAB5A4FU69 1503 aa9.56□□□□□ -0.88
CHEK2-224ENST00000491919 CAMSAP1Q5T5Y3 1602 aa9.56□□□□□ -0.88
CHEK2-224ENST00000491919 HECW1Q76N89 1606 aa9.56□□□□□ -0.88
CHEK2-224ENST00000491919 AXIN1O15169 862 aa9.56□□□□□ -0.88
CHEK2-224ENST00000491919 GRIPAP1Q4V328 841 aa9.56□□□□□ -0.88
CHEK2-224ENST00000491919 FHOD3Q2V2M9 1422 aa9.56□□□□□ -0.88
CHEK2-224ENST00000491919 PCDHGC3Q9UN70 934 aa9.55□□□□□ -0.88
CHEK2-224ENST00000491919 ATP10BO94823 1461 aa9.54□□□□□ -0.88
CHEK2-224ENST00000491919 ALKQ9UM73 1620 aa9.54□□□□□ -0.88
CHEK2-224ENST00000491919 CTC1Q2NKJ3 1217 aa9.54□□□□□ -0.88
CHEK2-224ENST00000491919 POTEAQ6S8J7 498 aa9.54□□□□□ -0.88
CHEK2-224ENST00000491919 SUPT5HO00267 1087 aaKnown RBP9.53□□□□□ -0.88
CHEK2-224ENST00000491919 USP46P62068 366 aa9.53□□□□□ -0.88
CHEK2-224ENST00000491919 PTCRAQ6ISU1 281 aaPredicted RBP9.53□□□□□ -0.88
CHEK2-224ENST00000491919 TTC24A2A3L6 582 aaPredicted RBP9.52□□□□□ -0.89
CHEK2-224ENST00000491919 ZBTB24O43167 697 aaPredicted RBP9.52□□□□□ -0.89
CHEK2-224ENST00000491919 NFX1Q12986 1120 aaKnown RBP9.52□□□□□ -0.89
CHEK2-224ENST00000491919 SNIP1Q8TAD8 396 aaKnown RBP9.52□□□□□ -0.89
CHEK2-224ENST00000491919 HPS1Q92902 700 aa9.52□□□□□ -0.89
CHEK2-224ENST00000491919 GPCPD1Q9NPB8 672 aa9.52□□□□□ -0.89
CHEK2-224ENST00000491919 SNRPBP14678 240 aaKnown RBP9.51□□□□□ -0.89
CHEK2-224ENST00000491919 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.5□□□□□ -0.89
CHEK2-224ENST00000491919 ATP13A2Q9NQ11 1180 aa9.5□□□□□ -0.89
CHEK2-224ENST00000491919 C11orf95C9JLR9 678 aaPredicted RBP9.49□□□□□ -0.89
CHEK2-224ENST00000491919 JUNDP17535 347 aa9.49□□□□□ -0.89
CHEK2-224ENST00000491919 RC3H1Q5TC82 1133 aaKnown RBP9.49□□□□□ -0.89
CHEK2-224ENST00000491919 VSIG10Q8N0Z9 540 aa9.49□□□□□ -0.89
CHEK2-224ENST00000491919 CCDC24Q8N4L8 307 aa9.49□□□□□ -0.89
CHEK2-224ENST00000491919 C9orf84Q5VXU9 1444 aa9.48□□□□□ -0.89
CHEK2-224ENST00000491919 ATP10AO60312 1499 aa9.47□□□□□ -0.89
CHEK2-224ENST00000491919 SIAH2O43255 324 aa9.47□□□□□ -0.89
CHEK2-224ENST00000491919 TOM1O60784 492 aa9.47□□□□□ -0.89
CHEK2-224ENST00000491919 CLCN1P35523 988 aa9.47□□□□□ -0.89
CHEK2-224ENST00000491919 MAGI2Q86UL8 1455 aa9.47□□□□□ -0.89
CHEK2-224ENST00000491919 CFAP74Q9C0B2 1584 aa9.46□□□□□ -0.89
CHEK2-224ENST00000491919 CTTNBP2Q8WZ74 1663 aa9.46□□□□□ -0.89
CHEK2-224ENST00000491919 SRCAPQ6ZRS2 3230 aa9.46□□□□□ -0.89
CHEK2-224ENST00000491919 WNT7BP56706 349 aa9.46□□□□□ -0.9
CHEK2-224ENST00000491919 TRAPPC8Q9Y2L5 1435 aa9.46□□□□□ -0.9
CHEK2-224ENST00000491919 SUPT6HQ7KZ85 1726 aaKnown RBP9.45□□□□□ -0.9
CHEK2-224ENST00000491919 RETREG3Q86VR2 466 aa9.45□□□□□ -0.9
CHEK2-224ENST00000491919 GOLGA3Q08378 1498 aa9.45□□□□□ -0.9
CHEK2-224ENST00000491919 SPIRE2Q8WWL2 714 aa9.44□□□□□ -0.9
CHEK2-224ENST00000491919 TRIM47Q96LD4 638 aa9.44□□□□□ -0.9
CHEK2-224ENST00000491919 RAPGEF2Q9Y4G8 1499 aa9.44□□□□□ -0.9
CHEK2-224ENST00000491919 WFS1O76024 890 aa9.43□□□□□ -0.9
CHEK2-224ENST00000491919 FDX1P10109 184 aa9.43□□□□□ -0.9
CHEK2-224ENST00000491919 NDUFV2P19404 249 aa9.43□□□□□ -0.9
CHEK2-224ENST00000491919 NUDT12Q9BQG2 462 aa9.43□□□□□ -0.9
CHEK2-224ENST00000491919 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.42□□□□□ -0.9
CHEK2-224ENST00000491919 TCOF1Q13428 1488 aaKnown RBP9.42□□□□□ -0.9
CHEK2-224ENST00000491919 SCAPERQ9BY12 1400 aa9.42□□□□□ -0.9
CHEK2-224ENST00000491919 MOXD2PA6NHM9 499 aa9.42□□□□□ -0.9
CHEK2-224ENST00000491919 SSTR3P32745 418 aaPredicted RBP9.41□□□□□ -0.9
CHEK2-224ENST00000491919 SH3BP2P78314 561 aa9.41□□□□□ -0.9
CHEK2-224ENST00000491919 BARGINQ6ZT62 677 aa9.41□□□□□ -0.9
CHEK2-224ENST00000491919 MYO3AQ8NEV4 1616 aa9.41□□□□□ -0.9
CHEK2-224ENST00000491919 ZNF142P52746 1687 aaPredicted RBP9.4□□□□□ -0.9
CHEK2-224ENST00000491919 ZMYND10O75800 440 aa9.4□□□□□ -0.9
CHEK2-224ENST00000491919 DIP2CQ9Y2E4 1556 aa9.4□□□□□ -0.9
CHEK2-224ENST00000491919 CPS1P31327 1500 aa9.4□□□□□ -0.91
CHEK2-224ENST00000491919 RAPGEF6Q8TEU7 1601 aa9.39□□□□□ -0.91
CHEK2-224ENST00000491919 WIPF1O43516 503 aa9.39□□□□□ -0.91
CHEK2-224ENST00000491919 ALDH1A1P00352 501 aa9.39□□□□□ -0.91
CHEK2-224ENST00000491919 AMHR2Q16671 573 aa9.39□□□□□ -0.91
CHEK2-224ENST00000491919 TRIM46Q7Z4K8 759 aa9.39□□□□□ -0.91
CHEK2-224ENST00000491919 NUTM1Q86Y26 1132 aa9.39□□□□□ -0.91
CHEK2-224ENST00000491919 SHANK2Q9UPX8 1470 aa9.39□□□□□ -0.91
CHEK2-224ENST00000491919 ABCA6Q8N139 1617 aa9.38□□□□□ -0.91
CHEK2-224ENST00000491919 CEP170BQ9Y4F5 1589 aaPredicted RBP9.38□□□□□ -0.91
CHEK2-224ENST00000491919 BMP1P13497 986 aa9.38□□□□□ -0.91
CHEK2-224ENST00000491919 PLA2R1Q13018 1463 aa9.38□□□□□ -0.91
CHEK2-224ENST00000491919 PTPRKQ15262 1439 aa9.38□□□□□ -0.91
CHEK2-224ENST00000491919 NEURL4Q96JN8 1562 aa9.37□□□□□ -0.91
CHEK2-224ENST00000491919 CCNYL3P0C7X3 344 aa9.37□□□□□ -0.91
CHEK2-224ENST00000491919 GIGYF2Q6Y7W6 1299 aaKnown RBP9.37□□□□□ -0.91
CHEK2-224ENST00000491919 NUP153P49790 1475 aaKnown RBP9.36□□□□□ -0.91
CHEK2-224ENST00000491919 C6orf229H3BNL8 230 aa9.36□□□□□ -0.91
CHEK2-224ENST00000491919 TULP1O00294 542 aaPredicted RBP9.36□□□□□ -0.91
CHEK2-224ENST00000491919 TERTO14746 1132 aaKnown RBP9.36□□□□□ -0.91
CHEK2-224ENST00000491919 MS4A1P11836 297 aa9.36□□□□□ -0.91
CHEK2-224ENST00000491919 ZC3H15Q8WU90 426 aaKnown RBP9.36□□□□□ -0.91
CHEK2-224ENST00000491919 VWDEQ8N2E2 1590 aa9.36□□□□□ -0.91
CHEK2-224ENST00000491919 STRCP1A6NGW2 1772 aa9.35□□□□□ -0.91
CHEK2-224ENST00000491919 POLR1AO95602 1720 aaPredicted RBP9.35□□□□□ -0.91
CHEK2-224ENST00000491919 PTPRNQ16849 979 aa9.35□□□□□ -0.91
CHEK2-224ENST00000491919 LINC01559Q495D7 138 aa9.35□□□□□ -0.91
CHEK2-224ENST00000491919 FAM9AQ8IZU1 332 aaPredicted RBP9.35□□□□□ -0.91
CHEK2-224ENST00000491919 UNC93B1Q9H1C4 597 aa9.35□□□□□ -0.91
CHEK2-224ENST00000491919 ESF1Q9H501 851 aaKnown RBP9.35□□□□□ -0.91
CHEK2-224ENST00000491919 EVA1BQ9NVM1 165 aa9.35□□□□□ -0.91
CHEK2-224ENST00000491919 TLL2Q9Y6L7 1015 aa9.35□□□□□ -0.91
CHEK2-224ENST00000491919 EHBP1Q8NDI1 1231 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms