RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 FIGNL2A6NMB9 653 aa8.41□□□□□ -1.06
VTA1-204ENST00000491881 PTSQ03393 145 aa8.41□□□□□ -1.06
VTA1-204ENST00000491881 PDE4DQ08499 809 aa8.41□□□□□ -1.06
VTA1-204ENST00000491881 RTL5Q5HYW3 569 aaPredicted RBP8.41□□□□□ -1.06
VTA1-204ENST00000491881 GPKOWQ92917 476 aaPredicted RBP eCLIP8.41□□□□□ -1.06
VTA1-204ENST00000491881 CNTNAP3BQ96NU0 1288 aa8.41□□□□□ -1.06
VTA1-204ENST00000491881 CNTNAP3Q9BZ76 1288 aa8.41□□□□□ -1.06
VTA1-204ENST00000491881 KRT76Q01546 638 aa8.4□□□□□ -1.06
VTA1-204ENST00000491881 ERFEQ4G0M1 354 aa8.4□□□□□ -1.06
VTA1-204ENST00000491881 PPP1R26Q5T8A7 1209 aaPredicted RBP8.4□□□□□ -1.06
VTA1-204ENST00000491881 GPR161Q8N6U8 529 aaKnown RBP8.4□□□□□ -1.06
VTA1-204ENST00000491881 CLK2P49760 499 aaKnown RBP8.39□□□□□ -1.07
VTA1-204ENST00000491881 CBLBQ13191 982 aa8.39□□□□□ -1.07
VTA1-204ENST00000491881 KCTD17Q8N5Z5 321 aa8.39□□□□□ -1.07
VTA1-204ENST00000491881 RNF225M0QZC1 329 aaPredicted RBP8.37□□□□□ -1.07
VTA1-204ENST00000491881 SPINT1O43278 529 aa8.37□□□□□ -1.07
VTA1-204ENST00000491881 Q6ZVU0 165 aa8.37□□□□□ -1.07
VTA1-204ENST00000491881 TMEM151AQ8N4L1 468 aa8.37□□□□□ -1.07
VTA1-204ENST00000491881 CCDC155Q8N6L0 562 aa8.37□□□□□ -1.07
VTA1-204ENST00000491881 ARHGAP9Q9BRR9 750 aa8.37□□□□□ -1.07
VTA1-204ENST00000491881 COL25A1Q9BXS0 654 aaPredicted RBP8.37□□□□□ -1.07
VTA1-204ENST00000491881 GPBP1L1Q9HC44 474 aaPredicted RBP8.37□□□□□ -1.07
VTA1-204ENST00000491881 GDF11O95390 407 aa8.36□□□□□ -1.07
VTA1-204ENST00000491881 GSK3AP49840 483 aa8.36□□□□□ -1.07
VTA1-204ENST00000491881 SUZ12Q15022 739 aaKnown RBP8.36□□□□□ -1.07
VTA1-204ENST00000491881 PDXDC2PQ6P474 469 aa8.36□□□□□ -1.07
VTA1-204ENST00000491881 NANOS1Q8WY41 292 aaKnown RBP8.36□□□□□ -1.07
VTA1-204ENST00000491881 SLC10A4Q96EP9 437 aa8.36□□□□□ -1.07
VTA1-204ENST00000491881 KCTD15Q96SI1 283 aaPredicted RBP8.36□□□□□ -1.07
VTA1-204ENST00000491881 RSPH6AQ9H0K4 717 aa8.36□□□□□ -1.07
VTA1-204ENST00000491881 POLR3EQ9NVU0 708 aa8.36□□□□□ -1.07
VTA1-204ENST00000491881 CDV3Q9UKY7 258 aaKnown RBP8.36□□□□□ -1.07
VTA1-204ENST00000491881 ADAMTS8Q9UP79 889 aa8.36□□□□□ -1.07
VTA1-204ENST00000491881 RASSF7Q02833 373 aa8.35□□□□□ -1.07
VTA1-204ENST00000491881 CTDSPL2Q05D32 466 aa8.35□□□□□ -1.07
VTA1-204ENST00000491881 DHX9Q08211 1270 aaKnown RBP8.35□□□□□ -1.07
VTA1-204ENST00000491881 KDM4CQ9H3R0 1056 aa8.35□□□□□ -1.07
VTA1-204ENST00000491881 TMEM132AQ24JP5 1023 aa8.34□□□□□ -1.07
VTA1-204ENST00000491881 ZBTB33Q86T24 672 aa8.34□□□□□ -1.07
VTA1-204ENST00000491881 SVOPQ8N4V2 548 aa8.34□□□□□ -1.07
VTA1-204ENST00000491881 CDC14CA4D256 554 aa8.33□□□□□ -1.08
VTA1-204ENST00000491881 SLC35F4A4IF30 521 aa8.33□□□□□ -1.08
VTA1-204ENST00000491881 FKBPLQ9UIM3 349 aa8.33□□□□□ -1.08
VTA1-204ENST00000491881 RELBQ01201 579 aa8.32□□□□□ -1.08
VTA1-204ENST00000491881 RNFT1Q5M7Z0 435 aa8.32□□□□□ -1.08
VTA1-204ENST00000491881 ZNF385CQ66K41 422 aaPredicted RBP8.32□□□□□ -1.08
VTA1-204ENST00000491881 AGBL1Q96MI9 1066 aa8.32□□□□□ -1.08
VTA1-204ENST00000491881 ITGA6P23229 1130 aa8.31□□□□□ -1.08
VTA1-204ENST00000491881 CTSOP43234 321 aaPredicted RBP8.31□□□□□ -1.08
VTA1-204ENST00000491881 SV2AQ7L0J3 742 aa8.31□□□□□ -1.08
VTA1-204ENST00000491881 VWA5B2Q8N398 1253 aa8.31□□□□□ -1.08
VTA1-204ENST00000491881 LRRN4Q8WUT4 740 aa8.31□□□□□ -1.08
VTA1-204ENST00000491881 INSM2Q96T92 566 aaPredicted RBP8.31□□□□□ -1.08
VTA1-204ENST00000491881 POLMQ9NP87 494 aaPredicted RBP8.31□□□□□ -1.08
VTA1-204ENST00000491881 INTS6LQ5JSJ4 861 aaKnown RBP8.3□□□□□ -1.08
VTA1-204ENST00000491881 ZC3H4Q9UPT8 1303 aaKnown RBP8.29□□□□□ -1.08
VTA1-204ENST00000491881 PTK2Q05397 1052 aa8.29□□□□□ -1.08
VTA1-204ENST00000491881 NR6A1Q15406 480 aa8.29□□□□□ -1.08
VTA1-204ENST00000491881 SLURP2P0DP57 97 aa8.28□□□□□ -1.08
VTA1-204ENST00000491881 WHAMMQ8TF30 809 aa8.28□□□□□ -1.08
VTA1-204ENST00000491881 ZNF395Q9H8N7 513 aaPredicted RBP8.28□□□□□ -1.08
VTA1-204ENST00000491881 ATP1B4Q9UN42 357 aaPredicted RBP8.28□□□□□ -1.08
VTA1-204ENST00000491881 NBPF20Q3BBV1 942 aa8.27□□□□□ -1.09
VTA1-204ENST00000491881 IL27Q8NEV9 243 aa8.27□□□□□ -1.09
VTA1-204ENST00000491881 RNF217Q8TC41 542 aa8.27□□□□□ -1.09
VTA1-204ENST00000491881 DDRGK1Q96HY6 314 aa8.27□□□□□ -1.09
VTA1-204ENST00000491881 IRS1P35568 1242 aa8.26□□□□□ -1.09
VTA1-204ENST00000491881 MARSP56192 900 aaKnown RBP8.26□□□□□ -1.09
VTA1-204ENST00000491881 RAB15P59190 212 aa8.26□□□□□ -1.09
VTA1-204ENST00000491881 ADAM32Q8TC27 787 aa8.26□□□□□ -1.09
VTA1-204ENST00000491881 TMPRSS4Q9NRS4 437 aa8.26□□□□□ -1.09
VTA1-204ENST00000491881 OCSTAMPQ9BR26 566 aa8.25□□□□□ -1.09
VTA1-204ENST00000491881 FAM117AQ9C073 453 aa8.25□□□□□ -1.09
VTA1-204ENST00000491881 GPSM3Q9Y4H4 160 aa8.25□□□□□ -1.09
VTA1-204ENST00000491881 ARHGEF15O94989 841 aa8.24□□□□□ -1.09
VTA1-204ENST00000491881 SKIV2LQ15477 1246 aaKnown RBP8.24□□□□□ -1.09
VTA1-204ENST00000491881 ZNF784Q8NCA9 323 aaPredicted RBP8.24□□□□□ -1.09
VTA1-204ENST00000491881 SENP3-EIF4A1A0A087X0R7 540 aa8.23□□□□□ -1.09
VTA1-204ENST00000491881 ADH1AP07327 375 aa8.23□□□□□ -1.09
VTA1-204ENST00000491881 GPAT2Q6NUI2 795 aa8.23□□□□□ -1.09
VTA1-204ENST00000491881 PNMA1Q8ND90 353 aa8.23□□□□□ -1.09
VTA1-204ENST00000491881 DNMT3AQ9Y6K1 912 aaPredicted RBP8.23□□□□□ -1.09
VTA1-204ENST00000491881 AP1G2O75843 785 aa8.22□□□□□ -1.09
VTA1-204ENST00000491881 ADAMTS2O95450 1211 aa8.22□□□□□ -1.09
VTA1-204ENST00000491881 MAP3K10Q02779 954 aa8.22□□□□□ -1.09
VTA1-204ENST00000491881 KANK3Q6NY19 840 aa8.22□□□□□ -1.09
VTA1-204ENST00000491881 DZIP3Q86Y13 1208 aaKnown RBP8.22□□□□□ -1.09
VTA1-204ENST00000491881 SCARF2Q96GP6 870 aaPredicted RBP8.22□□□□□ -1.09
VTA1-204ENST00000491881 ERVH48-1M5A8F1 160 aa8.21□□□□□ -1.1
VTA1-204ENST00000491881 FOXD4L5Q5VV16 416 aaPredicted RBP8.21□□□□□ -1.1
VTA1-204ENST00000491881 FBXO31Q5XUX0 539 aaPredicted RBP8.21□□□□□ -1.1
VTA1-204ENST00000491881 LYSMD3Q7Z3D4 306 aa8.21□□□□□ -1.1
VTA1-204ENST00000491881 PROCA1Q8NCQ7 364 aaPredicted RBP8.21□□□□□ -1.1
VTA1-204ENST00000491881 ADD1P35611 737 aaKnown RBP8.2□□□□□ -1.1
VTA1-204ENST00000491881 PTGIRP43119 386 aa8.2□□□□□ -1.1
VTA1-204ENST00000491881 SRSF11Q05519 484 aaKnown RBP8.2□□□□□ -1.1
VTA1-204ENST00000491881 SH3D19Q5HYK7 790 aa8.2□□□□□ -1.1
VTA1-204ENST00000491881 PPP2R2DQ66LE6 453 aa8.2□□□□□ -1.1
VTA1-204ENST00000491881 LYPD4Q6UWN0 246 aa8.2□□□□□ -1.1
VTA1-204ENST00000491881 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms