RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 HDGFL2Q7Z4V5 671 aaPredicted RBP26■■□□□ 1.75
SMIM4-205ENST00000491607 CSB-PGBD3P0DP91 1061 aa25.99■■□□□ 1.75
SMIM4-205ENST00000491607 CD163L1Q9NR16 1453 aa25.98■■□□□ 1.75
SMIM4-205ENST00000491607 SLC12A5Q9H2X9 1139 aa25.98■■□□□ 1.75
SMIM4-205ENST00000491607 NME9Q86XW9 330 aa25.97■■□□□ 1.75
SMIM4-205ENST00000491607 CAMKK2Q96RR4 588 aa25.97■■□□□ 1.75
SMIM4-205ENST00000491607 NFAT5O94916 1531 aa25.97■■□□□ 1.75
SMIM4-205ENST00000491607 R3HDM1Q15032 1099 aaKnown RBP25.96■■□□□ 1.75
SMIM4-205ENST00000491607 DDB1Q16531 1140 aa25.96■■□□□ 1.75
SMIM4-205ENST00000491607 TERF2IPQ9NYB0 399 aa25.95■■□□□ 1.74
SMIM4-205ENST00000491607 LRRC37A3O60309 1634 aa25.95■■□□□ 1.74
SMIM4-205ENST00000491607 OVOS2A0A0G2JMS6 1433 aa25.94■■□□□ 1.74
SMIM4-205ENST00000491607 OVOS2A0A0J9YW53 1432 aa25.94■■□□□ 1.74
SMIM4-205ENST00000491607 OVOS2Q6IE36 1432 aa25.94■■□□□ 1.74
SMIM4-205ENST00000491607 USP31Q70CQ4 1352 aa25.94■■□□□ 1.74
SMIM4-205ENST00000491607 PARD3Q8TEW0 1356 aa25.94■■□□□ 1.74
SMIM4-205ENST00000491607 ST20-MTHFSA0A0A6YYL1 179 aa25.93■■□□□ 1.74
SMIM4-205ENST00000491607 C11orf95C9JLR9 678 aaPredicted RBP25.93■■□□□ 1.74
SMIM4-205ENST00000491607 EDC4Q6P2E9 1401 aaKnown RBP25.92■■□□□ 1.74
SMIM4-205ENST00000491607 A0A1W2PP64 1363 aa25.92■■□□□ 1.74
SMIM4-205ENST00000491607 RGPD5Q99666 1765 aa25.92■■□□□ 1.74
SMIM4-205ENST00000491607 PUS7Q96PZ0 661 aaKnown RBP25.91■■□□□ 1.74
SMIM4-205ENST00000491607 CDCA7Q9BWT1 371 aaPredicted RBP25.91■■□□□ 1.74
SMIM4-205ENST00000491607 CARD10Q9BWT7 1032 aa25.91■■□□□ 1.74
SMIM4-205ENST00000491607 LRP5O75197 1615 aa25.91■■□□□ 1.74
SMIM4-205ENST00000491607 TESK2Q96S53 571 aa25.9■■□□□ 1.74
SMIM4-205ENST00000491607 WNK3Q9BYP7 1800 aa25.89■■□□□ 1.74
SMIM4-205ENST00000491607 ABCC6O95255 1503 aa25.88■■□□□ 1.73
SMIM4-205ENST00000491607 USP54Q70EL1 1684 aa25.88■■□□□ 1.73
SMIM4-205ENST00000491607 PEAK1Q9H792 1746 aa25.88■■□□□ 1.73
SMIM4-205ENST00000491607 SLC24A1O60721 1099 aa25.86■■□□□ 1.73
SMIM4-205ENST00000491607 RREB1Q92766 1687 aa25.86■■□□□ 1.73
SMIM4-205ENST00000491607 CCDC7Q96M83 1385 aa25.85■■□□□ 1.73
SMIM4-205ENST00000491607 NINLQ9Y2I6 1382 aa25.85■■□□□ 1.73
SMIM4-205ENST00000491607 MARCH10Q8NA82 808 aaPredicted RBP25.85■■□□□ 1.73
SMIM4-205ENST00000491607 NBPF14Q5TI25 921 aa25.84■■□□□ 1.73
SMIM4-205ENST00000491607 LTN1O94822 1766 aa25.83■■□□□ 1.73
SMIM4-205ENST00000491607 EXOC5O00471 708 aa25.83■■□□□ 1.73
SMIM4-205ENST00000491607 NLRP2Q9NX02 1062 aa25.83■■□□□ 1.73
SMIM4-205ENST00000491607 ERBB3P21860 1342 aa25.83■■□□□ 1.73
SMIM4-205ENST00000491607 NUP188Q5SRE5 1749 aa25.83■■□□□ 1.72
SMIM4-205ENST00000491607 USP47Q96K76 1375 aa25.82■■□□□ 1.72
SMIM4-205ENST00000491607 BCL11BQ9C0K0 894 aaPredicted RBP25.81■■□□□ 1.72
SMIM4-205ENST00000491607 ANKRD24Q8TF21 1146 aa25.8■■□□□ 1.72
SMIM4-205ENST00000491607 TMF1P82094 1093 aa25.79■■□□□ 1.72
SMIM4-205ENST00000491607 PTF1AQ7RTS3 328 aa25.79■■□□□ 1.72
SMIM4-205ENST00000491607 SBF2Q86WG5 1849 aa25.78■■□□□ 1.72
SMIM4-205ENST00000491607 TNS2Q63HR2 1409 aa25.78■■□□□ 1.72
SMIM4-205ENST00000491607 COG3Q96JB2 828 aa25.77■■□□□ 1.72
SMIM4-205ENST00000491607 PLSCR1O15162 318 aa25.76■■□□□ 1.71
SMIM4-205ENST00000491607 BCL9O00512 1426 aa25.76■■□□□ 1.71
SMIM4-205ENST00000491607 ANKRD36BQ8N2N9 1353 aa25.75■■□□□ 1.71
SMIM4-205ENST00000491607 IL2RBP14784 551 aa25.75■■□□□ 1.71
SMIM4-205ENST00000491607 PCGF6Q9BYE7 350 aa25.74■■□□□ 1.71
SMIM4-205ENST00000491607 IP6K1Q92551 441 aa25.73■■□□□ 1.71
SMIM4-205ENST00000491607 LTV1Q96GA3 475 aaPredicted RBP25.73■■□□□ 1.71
SMIM4-205ENST00000491607 RGPD3A6NKT7 1758 aaPredicted RBP25.73■■□□□ 1.71
SMIM4-205ENST00000491607 RGPD4Q7Z3J3 1758 aa25.73■■□□□ 1.71
SMIM4-205ENST00000491607 MAP3K19Q56UN5 1328 aa25.69■■□□□ 1.7
SMIM4-205ENST00000491607 FBLN1P23142 703 aa25.69■■□□□ 1.7
SMIM4-205ENST00000491607 AMPHP49418 695 aa25.69■■□□□ 1.7
SMIM4-205ENST00000491607 CDCA8Q53HL2 280 aa25.69■■□□□ 1.7
SMIM4-205ENST00000491607 ACSBG1Q96GR2 724 aa25.69■■□□□ 1.7
SMIM4-205ENST00000491607 KCNQ2O43526 872 aa25.68■■□□□ 1.7
SMIM4-205ENST00000491607 GGNBP2Q9H3C7 697 aa25.67■■□□□ 1.7
SMIM4-205ENST00000491607 TIMELESSQ9UNS1 1208 aa25.67■■□□□ 1.7
SMIM4-205ENST00000491607 HOXC9P31274 260 aa25.66■■□□□ 1.7
SMIM4-205ENST00000491607 PROM2Q8N271 834 aa25.66■■□□□ 1.7
SMIM4-205ENST00000491607 ANO8Q9HCE9 1232 aaPredicted RBP25.66■■□□□ 1.7
SMIM4-205ENST00000491607 FYB1O15117 783 aa25.64■■□□□ 1.7
SMIM4-205ENST00000491607 TXNRD1Q16881 649 aa25.64■■□□□ 1.7
SMIM4-205ENST00000491607 NHSQ6T4R5 1651 aa25.64■■□□□ 1.69
SMIM4-205ENST00000491607 FAM208AQ9UK61 1670 aaKnown RBP25.64■■□□□ 1.69
SMIM4-205ENST00000491607 CLSPNQ9HAW4 1339 aa25.63■■□□□ 1.69
SMIM4-205ENST00000491607 RRS1Q15050 365 aaKnown RBP25.63■■□□□ 1.69
SMIM4-205ENST00000491607 SPON1Q9HCB6 807 aa25.62■■□□□ 1.69
SMIM4-205ENST00000491607 DDX54Q8TDD1 881 aaKnown RBP25.61■■□□□ 1.69
SMIM4-205ENST00000491607 PPP1R1BQ9UD71 204 aaPredicted RBP25.61■■□□□ 1.69
SMIM4-205ENST00000491607 RTL1A6NKG5 1358 aa25.59■■□□□ 1.69
SMIM4-205ENST00000491607 STK32BQ9NY57 414 aa25.59■■□□□ 1.69
SMIM4-205ENST00000491607 KIF20BQ96Q89 1820 aa25.56■■□□□ 1.68
SMIM4-205ENST00000491607 SMG6Q86US8 1419 aaKnown RBP25.55■■□□□ 1.68
SMIM4-205ENST00000491607 MYOM1P52179 1685 aa25.55■■□□□ 1.68
SMIM4-205ENST00000491607 PDGFDQ9GZP0 370 aaPredicted RBP25.55■■□□□ 1.68
SMIM4-205ENST00000491607 NSD3Q9BZ95 1437 aa25.54■■□□□ 1.68
SMIM4-205ENST00000491607 SLC15A2Q16348 729 aa25.54■■□□□ 1.68
SMIM4-205ENST00000491607 CARD14Q9BXL6 1004 aa25.54■■□□□ 1.68
SMIM4-205ENST00000491607 CASZ1Q86V15 1759 aa25.54■■□□□ 1.68
SMIM4-205ENST00000491607 RGPD2P0DJD1 1756 aa25.53■■□□□ 1.68
SMIM4-205ENST00000491607 BTAF1O14981 1849 aa25.53■■□□□ 1.68
SMIM4-205ENST00000491607 ZBTB7AO95365 584 aa25.52■■□□□ 1.68
SMIM4-205ENST00000491607 NBPF6Q5VWK0 638 aa25.52■■□□□ 1.68
SMIM4-205ENST00000491607 USHBP1Q8N6Y0 703 aa25.52■■□□□ 1.68
SMIM4-205ENST00000491607 ZCRB1Q8TBF4 217 aaKnown RBP25.52■■□□□ 1.68
SMIM4-205ENST00000491607 SYTL4Q96C24 671 aaPredicted RBP25.52■■□□□ 1.68
SMIM4-205ENST00000491607 NBPF4Q96M43 638 aa25.52■■□□□ 1.68
SMIM4-205ENST00000491607 POLR3GLQ9BT43 218 aa25.52■■□□□ 1.68
SMIM4-205ENST00000491607 MEGF6O75095 1541 aa25.52■■□□□ 1.68
SMIM4-205ENST00000491607 HSP90AB2PQ58FF8 381 aa25.5■■□□□ 1.67
SMIM4-205ENST00000491607 CCER1Q8TC90 406 aaPredicted RBP25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms