RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 CRB1P82279 1406 aa12.71□□□□□ -0.38
HDAC3-211ENST00000491581 FBLN1P23142 703 aa12.7□□□□□ -0.38
HDAC3-211ENST00000491581 BAG6P46379 1132 aa12.7□□□□□ -0.38
HDAC3-211ENST00000491581 R3HDM1Q15032 1099 aaKnown RBP12.7□□□□□ -0.38
HDAC3-211ENST00000491581 TCP11L2Q8N4U5 519 aa12.7□□□□□ -0.38
HDAC3-211ENST00000491581 SBNO2Q9Y2G9 1366 aa12.69□□□□□ -0.38
HDAC3-211ENST00000491581 RGPD2P0DJD1 1756 aa12.69□□□□□ -0.38
HDAC3-211ENST00000491581 BARGINQ6ZT62 677 aa12.69□□□□□ -0.38
HDAC3-211ENST00000491581 AATKQ6ZMQ8 1374 aa12.69□□□□□ -0.38
HDAC3-211ENST00000491581 USP54Q70EL1 1684 aa12.68□□□□□ -0.38
HDAC3-211ENST00000491581 APBA3O96018 575 aa12.68□□□□□ -0.38
HDAC3-211ENST00000491581 TRIM26Q12899 539 aaPredicted RBP12.68□□□□□ -0.38
HDAC3-211ENST00000491581 PDE3BQ13370 1112 aa12.68□□□□□ -0.38
HDAC3-211ENST00000491581 TOM1L2Q6ZVM7 507 aa12.68□□□□□ -0.38
HDAC3-211ENST00000491581 ARHGEF25Q86VW2 580 aa12.68□□□□□ -0.38
HDAC3-211ENST00000491581 CAMKK2Q96RR4 588 aa12.68□□□□□ -0.38
HDAC3-211ENST00000491581 A0A1W2PP64 1363 aa12.68□□□□□ -0.38
HDAC3-211ENST00000491581 ST20-MTHFSA0A0A6YYL1 179 aa12.67□□□□□ -0.38
HDAC3-211ENST00000491581 TESK2Q96S53 571 aa12.67□□□□□ -0.38
HDAC3-211ENST00000491581 LRP5O75197 1615 aa12.66□□□□□ -0.38
HDAC3-211ENST00000491581 FAM196AQ6ZSG2 479 aa12.66□□□□□ -0.38
HDAC3-211ENST00000491581 DISP2A7MBM2 1401 aa12.65□□□□□ -0.38
HDAC3-211ENST00000491581 MARCH10Q8NA82 808 aaPredicted RBP12.65□□□□□ -0.38
HDAC3-211ENST00000491581 BRD4O60885 1362 aaPredicted RBP12.65□□□□□ -0.38
HDAC3-211ENST00000491581 WDR17Q8IZU2 1322 aa12.64□□□□□ -0.39
HDAC3-211ENST00000491581 TTC21AQ8NDW8 1320 aa12.64□□□□□ -0.39
HDAC3-211ENST00000491581 CSB-PGBD3P0DP91 1061 aa12.64□□□□□ -0.39
HDAC3-211ENST00000491581 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
HDAC3-211ENST00000491581 MYOM1P52179 1685 aa12.63□□□□□ -0.39
HDAC3-211ENST00000491581 USP31Q70CQ4 1352 aa12.62□□□□□ -0.39
HDAC3-211ENST00000491581 DDB1Q16531 1140 aa12.62□□□□□ -0.39
HDAC3-211ENST00000491581 PDGFDQ9GZP0 370 aaPredicted RBP12.62□□□□□ -0.39
HDAC3-211ENST00000491581 THRAP3Q9Y2W1 955 aaKnown RBP12.62□□□□□ -0.39
HDAC3-211ENST00000491581 OVOS2A0A0J9YW53 1432 aa12.62□□□□□ -0.39
HDAC3-211ENST00000491581 OVOS2Q6IE36 1432 aa12.62□□□□□ -0.39
HDAC3-211ENST00000491581 KCNH5Q8NCM2 988 aa12.61□□□□□ -0.39
HDAC3-211ENST00000491581 LTV1Q96GA3 475 aaPredicted RBP12.61□□□□□ -0.39
HDAC3-211ENST00000491581 PCGF6Q9BYE7 350 aa12.61□□□□□ -0.39
HDAC3-211ENST00000491581 OVOS2A0A0G2JMS6 1433 aa12.61□□□□□ -0.39
HDAC3-211ENST00000491581 EDC4Q6P2E9 1401 aaKnown RBP12.61□□□□□ -0.39
HDAC3-211ENST00000491581 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
HDAC3-211ENST00000491581 KCNQ2O43526 872 aa12.6□□□□□ -0.39
HDAC3-211ENST00000491581 ACSBG1Q96GR2 724 aa12.6□□□□□ -0.39
HDAC3-211ENST00000491581 ANO8Q9HCE9 1232 aaPredicted RBP12.6□□□□□ -0.39
HDAC3-211ENST00000491581 SHANK3Q9BYB0 1731 aa12.59□□□□□ -0.39
HDAC3-211ENST00000491581 USP47Q96K76 1375 aa12.59□□□□□ -0.39
HDAC3-211ENST00000491581 HDGFL2Q7Z4V5 671 aaPredicted RBP12.59□□□□□ -0.39
HDAC3-211ENST00000491581 PROM2Q8N271 834 aa12.59□□□□□ -0.39
HDAC3-211ENST00000491581 ANKRD24Q8TF21 1146 aa12.59□□□□□ -0.39
HDAC3-211ENST00000491581 CARD10Q9BWT7 1032 aa12.59□□□□□ -0.39
HDAC3-211ENST00000491581 RNF39Q9H2S5 420 aa12.59□□□□□ -0.39
HDAC3-211ENST00000491581 NLRP2Q9NX02 1062 aa12.59□□□□□ -0.39
HDAC3-211ENST00000491581 KIF20BQ96Q89 1820 aa12.59□□□□□ -0.39
HDAC3-211ENST00000491581 ERBB3P21860 1342 aa12.59□□□□□ -0.39
HDAC3-211ENST00000491581 FAM208AQ9UK61 1670 aaKnown RBP12.58□□□□□ -0.4
HDAC3-211ENST00000491581 BTAF1O14981 1849 aa12.58□□□□□ -0.4
HDAC3-211ENST00000491581 NHSQ6T4R5 1651 aa12.57□□□□□ -0.4
HDAC3-211ENST00000491581 RGPD3A6NKT7 1758 aaPredicted RBP12.57□□□□□ -0.4
HDAC3-211ENST00000491581 RGPD4Q7Z3J3 1758 aa12.57□□□□□ -0.4
HDAC3-211ENST00000491581 CASZ1Q86V15 1759 aa12.57□□□□□ -0.4
HDAC3-211ENST00000491581 TNS2Q63HR2 1409 aa12.56□□□□□ -0.4
HDAC3-211ENST00000491581 RRS1Q15050 365 aaKnown RBP12.56□□□□□ -0.4
HDAC3-211ENST00000491581 GGNBP2Q9H3C7 697 aa12.56□□□□□ -0.4
HDAC3-211ENST00000491581 TERF2IPQ9NYB0 399 aa12.56□□□□□ -0.4
HDAC3-211ENST00000491581 MAP3K19Q56UN5 1328 aa12.56□□□□□ -0.4
HDAC3-211ENST00000491581 DOT1LQ8TEK3 1739 aa12.55□□□□□ -0.4
HDAC3-211ENST00000491581 ABCC6O95255 1503 aa12.55□□□□□ -0.4
HDAC3-211ENST00000491581 USHBP1Q8N6Y0 703 aa12.54□□□□□ -0.4
HDAC3-211ENST00000491581 EXOC5O00471 708 aa12.53□□□□□ -0.4
HDAC3-211ENST00000491581 KCNQ4P56696 695 aa12.53□□□□□ -0.4
HDAC3-211ENST00000491581 CARD14Q9BXL6 1004 aa12.53□□□□□ -0.4
HDAC3-211ENST00000491581 BCL11BQ9C0K0 894 aaPredicted RBP12.53□□□□□ -0.4
HDAC3-211ENST00000491581 ANKRD36BQ8N2N9 1353 aa12.53□□□□□ -0.4
HDAC3-211ENST00000491581 CCDC7Q96M83 1385 aa12.53□□□□□ -0.4
HDAC3-211ENST00000491581 MEGF6O75095 1541 aa12.52□□□□□ -0.4
HDAC3-211ENST00000491581 KAT6BQ8WYB5 2073 aa12.52□□□□□ -0.4
HDAC3-211ENST00000491581 FYB1O15117 783 aa12.52□□□□□ -0.41
HDAC3-211ENST00000491581 HOXC9P31274 260 aa12.52□□□□□ -0.41
HDAC3-211ENST00000491581 IP6K1Q92551 441 aa12.52□□□□□ -0.41
HDAC3-211ENST00000491581 PARD3Q8TEW0 1356 aa12.52□□□□□ -0.41
HDAC3-211ENST00000491581 TUBGCP6Q96RT7 1819 aa12.51□□□□□ -0.41
HDAC3-211ENST00000491581 IL2RBP14784 551 aa12.51□□□□□ -0.41
HDAC3-211ENST00000491581 DDX54Q8TDD1 881 aaKnown RBP12.51□□□□□ -0.41
HDAC3-211ENST00000491581 COG3Q96JB2 828 aa12.51□□□□□ -0.41
HDAC3-211ENST00000491581 POLR3GLQ9BT43 218 aa12.51□□□□□ -0.41
HDAC3-211ENST00000491581 PAPPAQ13219 1627 aa12.51□□□□□ -0.41
HDAC3-211ENST00000491581 PLSCR1O15162 318 aa12.5□□□□□ -0.41
HDAC3-211ENST00000491581 ZBTB7AO95365 584 aa12.5□□□□□ -0.41
HDAC3-211ENST00000491581 TMF1P82094 1093 aa12.5□□□□□ -0.41
HDAC3-211ENST00000491581 TXNRD1Q16881 649 aa12.5□□□□□ -0.41
HDAC3-211ENST00000491581 NSD3Q9BZ95 1437 aa12.49□□□□□ -0.41
HDAC3-211ENST00000491581 AMPHP49418 695 aa12.49□□□□□ -0.41
HDAC3-211ENST00000491581 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
HDAC3-211ENST00000491581 PUS7Q96PZ0 661 aaKnown RBP12.49□□□□□ -0.41
HDAC3-211ENST00000491581 BCL9O00512 1426 aa12.48□□□□□ -0.41
HDAC3-211ENST00000491581 HSP90AB2PQ58FF8 381 aa12.48□□□□□ -0.41
HDAC3-211ENST00000491581 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
HDAC3-211ENST00000491581 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
HDAC3-211ENST00000491581 CDCA7Q9BWT1 371 aaPredicted RBP12.48□□□□□ -0.41
HDAC3-211ENST00000491581 LRRC4BQ9NT99 713 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms