RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 PARP4Q9UKK3 1724 aaKnown RBP16.36■□□□□ 0.21
CLCNKA-206ENST00000491433 JMYQ8N9B5 988 aa16.35■□□□□ 0.21
CLCNKA-206ENST00000491433 ARHGEF28Q8N1W1 1705 aaKnown RBP16.35■□□□□ 0.21
CLCNKA-206ENST00000491433 POLR3AO14802 1390 aaPredicted RBP16.35■□□□□ 0.21
CLCNKA-206ENST00000491433 DCAF11Q8TEB1 546 aa16.34■□□□□ 0.21
CLCNKA-206ENST00000491433 NUTM2GQ5VZR2 741 aa16.33■□□□□ 0.2
CLCNKA-206ENST00000491433 LARP1Q6PKG0 1096 aaKnown RBP16.33■□□□□ 0.2
CLCNKA-206ENST00000491433 NLRP13Q86W25 1043 aa16.33■□□□□ 0.2
CLCNKA-206ENST00000491433 ABTB2Q8N961 1025 aa16.33■□□□□ 0.2
CLCNKA-206ENST00000491433 KLRG1Q96E93 195 aa16.33■□□□□ 0.2
CLCNKA-206ENST00000491433 KDM2AQ9Y2K7 1162 aa16.33■□□□□ 0.2
CLCNKA-206ENST00000491433 CCDC61Q9Y6R9 512 aa16.33■□□□□ 0.2
CLCNKA-206ENST00000491433 OVOS2A0A0G2JMS6 1433 aa16.33■□□□□ 0.2
CLCNKA-206ENST00000491433 OVOS2A0A0J9YW53 1432 aa16.33■□□□□ 0.2
CLCNKA-206ENST00000491433 OVOS2Q6IE36 1432 aa16.33■□□□□ 0.2
CLCNKA-206ENST00000491433 LMO7Q8WWI1 1683 aa16.33■□□□□ 0.2
CLCNKA-206ENST00000491433 ACEP12821 1306 aa16.32■□□□□ 0.2
CLCNKA-206ENST00000491433 PROM2Q8N271 834 aa16.32■□□□□ 0.2
CLCNKA-206ENST00000491433 TOPAZ1Q8N9V7 1692 aa16.31■□□□□ 0.2
CLCNKA-206ENST00000491433 ADCY9O60503 1353 aa16.31■□□□□ 0.2
CLCNKA-206ENST00000491433 BRD4O60885 1362 aaPredicted RBP16.31■□□□□ 0.2
CLCNKA-206ENST00000491433 PLEKHG3A1L390 1219 aa16.31■□□□□ 0.2
CLCNKA-206ENST00000491433 CDK19Q9BWU1 502 aa16.31■□□□□ 0.2
CLCNKA-206ENST00000491433 CRB1P82279 1406 aa16.3■□□□□ 0.2
CLCNKA-206ENST00000491433 USP19O94966 1318 aa16.3■□□□□ 0.2
CLCNKA-206ENST00000491433 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
CLCNKA-206ENST00000491433 KIF3CO14782 793 aa16.29■□□□□ 0.2
CLCNKA-206ENST00000491433 POLD1P28340 1107 aa16.29■□□□□ 0.2
CLCNKA-206ENST00000491433 SBF2Q86WG5 1849 aa16.29■□□□□ 0.2
CLCNKA-206ENST00000491433 GCP02774 474 aa16.28■□□□□ 0.2
CLCNKA-206ENST00000491433 TXNRD1Q16881 649 aa16.28■□□□□ 0.2
CLCNKA-206ENST00000491433 COL5A2P05997 1499 aaPredicted RBP16.28■□□□□ 0.2
CLCNKA-206ENST00000491433 DDB1Q16531 1140 aa16.27■□□□□ 0.2
CLCNKA-206ENST00000491433 NLGN2Q8NFZ4 835 aa16.27■□□□□ 0.2
CLCNKA-206ENST00000491433 PEAK1Q9H792 1746 aa16.27■□□□□ 0.19
CLCNKA-206ENST00000491433 CDCA7Q9BWT1 371 aaPredicted RBP16.26■□□□□ 0.19
CLCNKA-206ENST00000491433 TOMM70O94826 608 aa16.25■□□□□ 0.19
CLCNKA-206ENST00000491433 LRRC37A3O60309 1634 aa16.24■□□□□ 0.19
CLCNKA-206ENST00000491433 AKAP12Q02952 1782 aa16.23■□□□□ 0.19
CLCNKA-206ENST00000491433 KIAA1210Q9ULL0 1709 aa16.23■□□□□ 0.19
CLCNKA-206ENST00000491433 BCL9O00512 1426 aa16.23■□□□□ 0.19
CLCNKA-206ENST00000491433 TOM1L2Q6ZVM7 507 aa16.22■□□□□ 0.19
CLCNKA-206ENST00000491433 RAB3GAP2Q9H2M9 1393 aa16.22■□□□□ 0.19
CLCNKA-206ENST00000491433 PPIP5K1Q6PFW1 1433 aa16.21■□□□□ 0.19
CLCNKA-206ENST00000491433 SRPK2P78362 688 aaKnown RBP16.21■□□□□ 0.19
CLCNKA-206ENST00000491433 PTF1AQ7RTS3 328 aa16.21■□□□□ 0.19
CLCNKA-206ENST00000491433 WNK3Q9BYP7 1800 aa16.21■□□□□ 0.19
CLCNKA-206ENST00000491433 WDR90Q96KV7 1748 aa16.2■□□□□ 0.18
CLCNKA-206ENST00000491433 ZBTB7CA1YPR0 619 aa16.2■□□□□ 0.18
CLCNKA-206ENST00000491433 SLC16A10Q8TF71 515 aa16.2■□□□□ 0.18
CLCNKA-206ENST00000491433 PCNTO95613 3336 aa16.2■□□□□ 0.18
CLCNKA-206ENST00000491433 NLRP6P59044 892 aa16.19■□□□□ 0.18
CLCNKA-206ENST00000491433 SLIT3O75094 1523 aa16.19■□□□□ 0.18
CLCNKA-206ENST00000491433 WDR17Q8IZU2 1322 aa16.19■□□□□ 0.18
CLCNKA-206ENST00000491433 HTRA3P83110 453 aa16.17■□□□□ 0.18
CLCNKA-206ENST00000491433 HSPA1AP0DMV8 641 aaKnown RBP16.16■□□□□ 0.18
CLCNKA-206ENST00000491433 HSPA1BP0DMV9 641 aaKnown RBP16.16■□□□□ 0.18
CLCNKA-206ENST00000491433 FAM161AQ3B820 660 aa16.16■□□□□ 0.18
CLCNKA-206ENST00000491433 MARCH10Q8NA82 808 aaPredicted RBP16.16■□□□□ 0.18
CLCNKA-206ENST00000491433 KCNH5Q8NCM2 988 aa16.16■□□□□ 0.18
CLCNKA-206ENST00000491433 USP6P35125 1406 aa16.16■□□□□ 0.18
CLCNKA-206ENST00000491433 TNS2Q63HR2 1409 aa16.16■□□□□ 0.18
CLCNKA-206ENST00000491433 COL18A1P39060 1754 aa16.15■□□□□ 0.18
CLCNKA-206ENST00000491433 EXOC5O00471 708 aa16.15■□□□□ 0.18
CLCNKA-206ENST00000491433 CENPJQ9HC77 1338 aaPredicted RBP16.15■□□□□ 0.18
CLCNKA-206ENST00000491433 QRICH2Q9H0J4 1663 aa16.14■□□□□ 0.18
CLCNKA-206ENST00000491433 CARD10Q9BWT7 1032 aa16.14■□□□□ 0.17
CLCNKA-206ENST00000491433 CSB-PGBD3P0DP91 1061 aa16.13■□□□□ 0.17
CLCNKA-206ENST00000491433 CCDC7Q96M83 1385 aa16.13■□□□□ 0.17
CLCNKA-206ENST00000491433 CPSF1Q10570 1443 aaKnown RBP16.12■□□□□ 0.17
CLCNKA-206ENST00000491433 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
CLCNKA-206ENST00000491433 CABP2Q9NPB3 220 aa16.12■□□□□ 0.17
CLCNKA-206ENST00000491433 CABP1Q9NZU7 370 aa16.12■□□□□ 0.17
CLCNKA-206ENST00000491433 RBM46Q8TBY0 533 aaKnown RBP16.11■□□□□ 0.17
CLCNKA-206ENST00000491433 ARHGEF25Q86VW2 580 aa16.1■□□□□ 0.17
CLCNKA-206ENST00000491433 PIK3C2AO00443 1686 aa16.1■□□□□ 0.17
CLCNKA-206ENST00000491433 RGPD5Q99666 1765 aa16.1■□□□□ 0.17
CLCNKA-206ENST00000491433 ABCC6O95255 1503 aa16.09■□□□□ 0.17
CLCNKA-206ENST00000491433 NHSQ6T4R5 1651 aa16.09■□□□□ 0.17
CLCNKA-206ENST00000491433 ZNF827Q17R98 1081 aa16.09■□□□□ 0.17
CLCNKA-206ENST00000491433 AXIN2Q9Y2T1 843 aa16.09■□□□□ 0.17
CLCNKA-206ENST00000491433 FSTL1Q12841 308 aa16.08■□□□□ 0.16
CLCNKA-206ENST00000491433 EVC2Q86UK5 1308 aa16.08■□□□□ 0.16
CLCNKA-206ENST00000491433 TTC21AQ8NDW8 1320 aa16.08■□□□□ 0.16
CLCNKA-206ENST00000491433 TRPM1Q7Z4N2 1603 aa16.08■□□□□ 0.16
CLCNKA-206ENST00000491433 NBPF1Q3BBV0 1214 aa16.07■□□□□ 0.16
CLCNKA-206ENST00000491433 C16orf71Q8IYS4 520 aaPredicted RBP16.07■□□□□ 0.16
CLCNKA-206ENST00000491433 PAPPAQ13219 1627 aa16.06■□□□□ 0.16
CLCNKA-206ENST00000491433 TTC21BQ7Z4L5 1316 aa16.05■□□□□ 0.16
CLCNKA-206ENST00000491433 COL24A1Q17RW2 1714 aa16.04■□□□□ 0.16
CLCNKA-206ENST00000491433 KAT6BQ8WYB5 2073 aa16.03■□□□□ 0.16
CLCNKA-206ENST00000491433 MLLT1Q03111 559 aaPredicted RBP16.03■□□□□ 0.16
CLCNKA-206ENST00000491433 QSER1Q2KHR3 1735 aa16.02■□□□□ 0.16
CLCNKA-206ENST00000491433 CD2APQ9Y5K6 639 aa16.02■□□□□ 0.16
CLCNKA-206ENST00000491433 BTAF1O14981 1849 aa16.02■□□□□ 0.16
CLCNKA-206ENST00000491433 PNPLA7Q6ZV29 1317 aa16.01■□□□□ 0.15
CLCNKA-206ENST00000491433 NFAT5O94916 1531 aa16.01■□□□□ 0.15
CLCNKA-206ENST00000491433 SOX12O15370 315 aa16.01■□□□□ 0.15
CLCNKA-206ENST00000491433 IL2RBP14784 551 aa16.01■□□□□ 0.15
CLCNKA-206ENST00000491433 SLC27A3Q5K4L6 730 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms