RNA–Protein interactions for RNA: ENST00000491162.1

CLCN2-209, Transcript of chloride voltage-gated channel 2, humanhuman

TSL 4

Gene CLCN2, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-209ENST00000491162 USP54Q70EL1 1684 aa16.34■□□□□ 0.21
CLCN2-209ENST00000491162 TOM1L2Q6ZVM7 507 aa16.33■□□□□ 0.2
CLCN2-209ENST00000491162 THRAP3Q9Y2W1 955 aaKnown RBP16.33■□□□□ 0.2
CLCN2-209ENST00000491162 KTN1Q86UP2 1357 aaKnown RBP16.32■□□□□ 0.2
CLCN2-209ENST00000491162 ARHGEF25Q86VW2 580 aa16.32■□□□□ 0.2
CLCN2-209ENST00000491162 RGPD3A6NKT7 1758 aaPredicted RBP16.31■□□□□ 0.2
CLCN2-209ENST00000491162 RGPD4Q7Z3J3 1758 aa16.31■□□□□ 0.2
CLCN2-209ENST00000491162 OVOS2A0A0G2JMS6 1433 aa16.31■□□□□ 0.2
CLCN2-209ENST00000491162 OVOS2A0A0J9YW53 1432 aa16.31■□□□□ 0.2
CLCN2-209ENST00000491162 OVOS2Q6IE36 1432 aa16.31■□□□□ 0.2
CLCN2-209ENST00000491162 WDR17Q8IZU2 1322 aa16.31■□□□□ 0.2
CLCN2-209ENST00000491162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.31■□□□□ 0.2
CLCN2-209ENST00000491162 PARD3Q8TEW0 1356 aa16.29■□□□□ 0.2
CLCN2-209ENST00000491162 NME9Q86XW9 330 aa16.29■□□□□ 0.2
CLCN2-209ENST00000491162 MARCH10Q8NA82 808 aaPredicted RBP16.29■□□□□ 0.2
CLCN2-209ENST00000491162 SBNO2Q9Y2G9 1366 aa16.28■□□□□ 0.2
CLCN2-209ENST00000491162 TTC21AQ8NDW8 1320 aa16.28■□□□□ 0.2
CLCN2-209ENST00000491162 DDB1Q16531 1140 aa16.28■□□□□ 0.2
CLCN2-209ENST00000491162 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
CLCN2-209ENST00000491162 CARD11Q9BXL7 1154 aa16.28■□□□□ 0.2
CLCN2-209ENST00000491162 CASZ1Q86V15 1759 aa16.28■□□□□ 0.2
CLCN2-209ENST00000491162 SLC12A5Q9H2X9 1139 aa16.27■□□□□ 0.2
CLCN2-209ENST00000491162 RGPD2P0DJD1 1756 aa16.26■□□□□ 0.19
CLCN2-209ENST00000491162 CSB-PGBD3P0DP91 1061 aa16.26■□□□□ 0.19
CLCN2-209ENST00000491162 ANO8Q9HCE9 1232 aaPredicted RBP16.26■□□□□ 0.19
CLCN2-209ENST00000491162 KCNH5Q8NCM2 988 aa16.25■□□□□ 0.19
CLCN2-209ENST00000491162 TMC1Q8TDI8 760 aa16.25■□□□□ 0.19
CLCN2-209ENST00000491162 PDGFDQ9GZP0 370 aaPredicted RBP16.25■□□□□ 0.19
CLCN2-209ENST00000491162 NHSQ6T4R5 1651 aa16.24■□□□□ 0.19
CLCN2-209ENST00000491162 CARD10Q9BWT7 1032 aa16.24■□□□□ 0.19
CLCN2-209ENST00000491162 A0A1W2PP64 1363 aa16.24■□□□□ 0.19
CLCN2-209ENST00000491162 USP31Q70CQ4 1352 aa16.24■□□□□ 0.19
CLCN2-209ENST00000491162 TONSLQ96HA7 1378 aa16.24■□□□□ 0.19
CLCN2-209ENST00000491162 ABCC6O95255 1503 aa16.24■□□□□ 0.19
CLCN2-209ENST00000491162 PROM2Q8N271 834 aa16.23■□□□□ 0.19
CLCN2-209ENST00000491162 BTAF1O14981 1849 aa16.22■□□□□ 0.19
CLCN2-209ENST00000491162 TNS2Q63HR2 1409 aa16.22■□□□□ 0.19
CLCN2-209ENST00000491162 KAT6BQ8WYB5 2073 aa16.22■□□□□ 0.19
CLCN2-209ENST00000491162 KCNQ2O43526 872 aa16.21■□□□□ 0.19
CLCN2-209ENST00000491162 NBPF14Q5TI25 921 aa16.21■□□□□ 0.19
CLCN2-209ENST00000491162 BCL11BQ9C0K0 894 aaPredicted RBP16.21■□□□□ 0.19
CLCN2-209ENST00000491162 MYOM1P52179 1685 aa16.21■□□□□ 0.18
CLCN2-209ENST00000491162 EDC4Q6P2E9 1401 aaKnown RBP16.2■□□□□ 0.18
CLCN2-209ENST00000491162 FBLN1P23142 703 aa16.2■□□□□ 0.18
CLCN2-209ENST00000491162 ERBB3P21860 1342 aa16.19■□□□□ 0.18
CLCN2-209ENST00000491162 PLSCR1O15162 318 aa16.19■□□□□ 0.18
CLCN2-209ENST00000491162 ACSBG1Q96GR2 724 aa16.19■□□□□ 0.18
CLCN2-209ENST00000491162 TESK2Q96S53 571 aa16.19■□□□□ 0.18
CLCN2-209ENST00000491162 SHANK3Q9BYB0 1731 aa16.19■□□□□ 0.18
CLCN2-209ENST00000491162 BCL9O00512 1426 aa16.19■□□□□ 0.18
CLCN2-209ENST00000491162 CCDC7Q96M83 1385 aa16.18■□□□□ 0.18
CLCN2-209ENST00000491162 NLRP2Q9NX02 1062 aa16.18■□□□□ 0.18
CLCN2-209ENST00000491162 FAM208AQ9UK61 1670 aaKnown RBP16.18■□□□□ 0.18
CLCN2-209ENST00000491162 ST20-MTHFSA0A0A6YYL1 179 aa16.17■□□□□ 0.18
CLCN2-209ENST00000491162 EXOC5O00471 708 aa16.17■□□□□ 0.18
CLCN2-209ENST00000491162 HDGFL2Q7Z4V5 671 aaPredicted RBP16.17■□□□□ 0.18
CLCN2-209ENST00000491162 ANKRD24Q8TF21 1146 aa16.17■□□□□ 0.18
CLCN2-209ENST00000491162 CDCA7Q9BWT1 371 aaPredicted RBP16.17■□□□□ 0.18
CLCN2-209ENST00000491162 PAPPAQ13219 1627 aa16.16■□□□□ 0.18
CLCN2-209ENST00000491162 C11orf95C9JLR9 678 aaPredicted RBP16.15■□□□□ 0.18
CLCN2-209ENST00000491162 TXNRD1Q16881 649 aa16.15■□□□□ 0.18
CLCN2-209ENST00000491162 DOT1LQ8TEK3 1739 aa16.15■□□□□ 0.18
CLCN2-209ENST00000491162 LTV1Q96GA3 475 aaPredicted RBP16.15■□□□□ 0.18
CLCN2-209ENST00000491162 ZBTB7AO95365 584 aa16.14■□□□□ 0.17
CLCN2-209ENST00000491162 SPON1Q9HCB6 807 aa16.14■□□□□ 0.17
CLCN2-209ENST00000491162 KIF20BQ96Q89 1820 aa16.14■□□□□ 0.17
CLCN2-209ENST00000491162 TUBGCP6Q96RT7 1819 aa16.14■□□□□ 0.17
CLCN2-209ENST00000491162 TERF2IPQ9NYB0 399 aa16.13■□□□□ 0.17
CLCN2-209ENST00000491162 IL2RBP14784 551 aa16.12■□□□□ 0.17
CLCN2-209ENST00000491162 PPP1R1BQ9UD71 204 aaPredicted RBP16.12■□□□□ 0.17
CLCN2-209ENST00000491162 ATF5Q9Y2D1 282 aaPredicted RBP16.11■□□□□ 0.17
CLCN2-209ENST00000491162 MAP3K19Q56UN5 1328 aa16.11■□□□□ 0.17
CLCN2-209ENST00000491162 PTGER2P43116 358 aa16.09■□□□□ 0.17
CLCN2-209ENST00000491162 IP6K1Q92551 441 aa16.09■□□□□ 0.17
CLCN2-209ENST00000491162 MEGF6O75095 1541 aa16.09■□□□□ 0.17
CLCN2-209ENST00000491162 SLC15A2Q16348 729 aa16.08■□□□□ 0.16
CLCN2-209ENST00000491162 ZNF827Q17R98 1081 aa16.08■□□□□ 0.16
CLCN2-209ENST00000491162 PUS7Q96PZ0 661 aaKnown RBP16.08■□□□□ 0.16
CLCN2-209ENST00000491162 STK32BQ9NY57 414 aa16.08■□□□□ 0.16
CLCN2-209ENST00000491162 USP47Q96K76 1375 aa16.08■□□□□ 0.16
CLCN2-209ENST00000491162 HOXC9P31274 260 aa16.07■□□□□ 0.16
CLCN2-209ENST00000491162 KCNQ4P56696 695 aa16.07■□□□□ 0.16
CLCN2-209ENST00000491162 RRS1Q15050 365 aaKnown RBP16.07■□□□□ 0.16
CLCN2-209ENST00000491162 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
CLCN2-209ENST00000491162 LRRC4BQ9NT99 713 aa16.07■□□□□ 0.16
CLCN2-209ENST00000491162 ANKRD36BQ8N2N9 1353 aa16.07■□□□□ 0.16
CLCN2-209ENST00000491162 NINLQ9Y2I6 1382 aa16.07■□□□□ 0.16
CLCN2-209ENST00000491162 LY75O60449 1722 aa16.07■□□□□ 0.16
CLCN2-209ENST00000491162 COG3Q96JB2 828 aa16.06■□□□□ 0.16
CLCN2-209ENST00000491162 GGNBP2Q9H3C7 697 aa16.06■□□□□ 0.16
CLCN2-209ENST00000491162 QSER1Q2KHR3 1735 aa16.05■□□□□ 0.16
CLCN2-209ENST00000491162 USHBP1Q8N6Y0 703 aa16.05■□□□□ 0.16
CLCN2-209ENST00000491162 AMPHP49418 695 aa16.04■□□□□ 0.16
CLCN2-209ENST00000491162 NSD2O96028 1365 aa16.03■□□□□ 0.16
CLCN2-209ENST00000491162 FYB1O15117 783 aa16.03■□□□□ 0.16
CLCN2-209ENST00000491162 YY1P25490 414 aa16.03■□□□□ 0.16
CLCN2-209ENST00000491162 TRIM26Q12899 539 aaPredicted RBP16.03■□□□□ 0.16
CLCN2-209ENST00000491162 SGIP1Q9BQI5 828 aa16.03■□□□□ 0.16
CLCN2-209ENST00000491162 TOGARAM1Q9Y4F4 1720 aa16.02■□□□□ 0.16
CLCN2-209ENST00000491162 COL24A1Q17RW2 1714 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms