RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 AKAP12Q02952 1782 aa19.87■□□□□ 0.77
CTDSP1-210ENST00000491064 MYOM1P52179 1685 aa19.87■□□□□ 0.77
CTDSP1-210ENST00000491064 USP6P35125 1406 aa19.86■□□□□ 0.77
CTDSP1-210ENST00000491064 NLRP6P59044 892 aa19.86■□□□□ 0.77
CTDSP1-210ENST00000491064 TOM1L2Q6ZVM7 507 aa19.86■□□□□ 0.77
CTDSP1-210ENST00000491064 PROM2Q8N271 834 aa19.86■□□□□ 0.77
CTDSP1-210ENST00000491064 BCL9O00512 1426 aa19.85■□□□□ 0.77
CTDSP1-210ENST00000491064 PIK3C2AO00443 1686 aa19.85■□□□□ 0.77
CTDSP1-210ENST00000491064 CENPJQ9HC77 1338 aaPredicted RBP19.85■□□□□ 0.77
CTDSP1-210ENST00000491064 MARCH10Q8NA82 808 aaPredicted RBP19.84■□□□□ 0.77
CTDSP1-210ENST00000491064 QRICH2Q9H0J4 1663 aa19.84■□□□□ 0.77
CTDSP1-210ENST00000491064 WDR17Q8IZU2 1322 aa19.83■□□□□ 0.77
CTDSP1-210ENST00000491064 ZBTB7AO95365 584 aa19.83■□□□□ 0.77
CTDSP1-210ENST00000491064 PTGER2P43116 358 aa19.83■□□□□ 0.77
CTDSP1-210ENST00000491064 CABP1Q9NZU7 370 aa19.83■□□□□ 0.77
CTDSP1-210ENST00000491064 AXIN2Q9Y2T1 843 aa19.83■□□□□ 0.77
CTDSP1-210ENST00000491064 RGPD5Q99666 1765 aa19.83■□□□□ 0.76
CTDSP1-210ENST00000491064 CDCA7Q9BWT1 371 aaPredicted RBP19.82■□□□□ 0.76
CTDSP1-210ENST00000491064 CPSF1Q10570 1443 aaKnown RBP19.81■□□□□ 0.76
CTDSP1-210ENST00000491064 ATF5Q9Y2D1 282 aaPredicted RBP19.79■□□□□ 0.76
CTDSP1-210ENST00000491064 TXNRD1Q16881 649 aa19.78■□□□□ 0.76
CTDSP1-210ENST00000491064 ARHGEF25Q86VW2 580 aa19.78■□□□□ 0.76
CTDSP1-210ENST00000491064 ZNF784Q8NCA9 323 aaPredicted RBP19.78■□□□□ 0.76
CTDSP1-210ENST00000491064 STK32BQ9NY57 414 aa19.78■□□□□ 0.76
CTDSP1-210ENST00000491064 CHD4Q14839 1912 aa19.77■□□□□ 0.76
CTDSP1-210ENST00000491064 SLC15A2Q16348 729 aa19.77■□□□□ 0.76
CTDSP1-210ENST00000491064 CARD10Q9BWT7 1032 aa19.77■□□□□ 0.76
CTDSP1-210ENST00000491064 SYT17Q9BSW7 474 aa19.75■□□□□ 0.75
CTDSP1-210ENST00000491064 FHDC1Q9C0D6 1143 aaPredicted RBP19.75■□□□□ 0.75
CTDSP1-210ENST00000491064 TRPM1Q7Z4N2 1603 aa19.73■□□□□ 0.75
CTDSP1-210ENST00000491064 NHSQ6T4R5 1651 aa19.73■□□□□ 0.75
CTDSP1-210ENST00000491064 EXOC5O00471 708 aa19.73■□□□□ 0.75
CTDSP1-210ENST00000491064 CSB-PGBD3P0DP91 1061 aa19.73■□□□□ 0.75
CTDSP1-210ENST00000491064 KCNH5Q8NCM2 988 aa19.73■□□□□ 0.75
CTDSP1-210ENST00000491064 SGIP1Q9BQI5 828 aa19.73■□□□□ 0.75
CTDSP1-210ENST00000491064 MTFR1LQ9H019 292 aa19.73■□□□□ 0.75
CTDSP1-210ENST00000491064 TNS2Q63HR2 1409 aa19.73■□□□□ 0.75
CTDSP1-210ENST00000491064 TTC21BQ7Z4L5 1316 aa19.73■□□□□ 0.75
CTDSP1-210ENST00000491064 NFAT5O94916 1531 aa19.72■□□□□ 0.75
CTDSP1-210ENST00000491064 SOX12O15370 315 aa19.72■□□□□ 0.75
CTDSP1-210ENST00000491064 EVC2Q86UK5 1308 aa19.72■□□□□ 0.75
CTDSP1-210ENST00000491064 CCDC7Q96M83 1385 aa19.71■□□□□ 0.75
CTDSP1-210ENST00000491064 ABCC6O95255 1503 aa19.71■□□□□ 0.75
CTDSP1-210ENST00000491064 PAPPAQ13219 1627 aa19.7■□□□□ 0.74
CTDSP1-210ENST00000491064 ZNF692Q9BU19 519 aaPredicted RBP19.7■□□□□ 0.74
CTDSP1-210ENST00000491064 TTC21AQ8NDW8 1320 aa19.69■□□□□ 0.74
CTDSP1-210ENST00000491064 KAT6BQ8WYB5 2073 aa19.67■□□□□ 0.74
CTDSP1-210ENST00000491064 BTAF1O14981 1849 aa19.67■□□□□ 0.74
CTDSP1-210ENST00000491064 GOLGB1Q14789 3259 aaKnown RBP19.66■□□□□ 0.74
CTDSP1-210ENST00000491064 ACSBG1Q96GR2 724 aa19.66■□□□□ 0.74
CTDSP1-210ENST00000491064 ARXQ96QS3 562 aa19.66■□□□□ 0.74
CTDSP1-210ENST00000491064 MAP3K5Q99683 1374 aa19.66■□□□□ 0.74
CTDSP1-210ENST00000491064 MON2Q7Z3U7 1717 aa19.64■□□□□ 0.73
CTDSP1-210ENST00000491064 KTN1Q86UP2 1357 aaKnown RBP19.63■□□□□ 0.73
CTDSP1-210ENST00000491064 SENP3-EIF4A1A0A087X0R7 540 aa19.63■□□□□ 0.73
CTDSP1-210ENST00000491064 C1QTNF8P60827 252 aa19.63■□□□□ 0.73
CTDSP1-210ENST00000491064 USP54Q70EL1 1684 aa19.62■□□□□ 0.73
CTDSP1-210ENST00000491064 ERBB3P21860 1342 aa19.62■□□□□ 0.73
CTDSP1-210ENST00000491064 LTN1O94822 1766 aa19.62■□□□□ 0.73
CTDSP1-210ENST00000491064 ZNF827Q17R98 1081 aa19.61■□□□□ 0.73
CTDSP1-210ENST00000491064 L3MBTL2Q969R5 705 aa19.61■□□□□ 0.73
CTDSP1-210ENST00000491064 LRRC4BQ9NT99 713 aa19.6■□□□□ 0.73
CTDSP1-210ENST00000491064 NLRP2Q9NX02 1062 aa19.6■□□□□ 0.73
CTDSP1-210ENST00000491064 QSER1Q2KHR3 1735 aa19.59■□□□□ 0.73
CTDSP1-210ENST00000491064 USP31Q70CQ4 1352 aa19.59■□□□□ 0.73
CTDSP1-210ENST00000491064 IL2RBP14784 551 aa19.59■□□□□ 0.73
CTDSP1-210ENST00000491064 COL24A1Q17RW2 1714 aa19.58■□□□□ 0.72
CTDSP1-210ENST00000491064 GPR162Q16538 588 aa19.57■□□□□ 0.72
CTDSP1-210ENST00000491064 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.57■□□□□ 0.72
CTDSP1-210ENST00000491064 ROCK2O75116 1388 aaKnown RBP19.57■□□□□ 0.72
CTDSP1-210ENST00000491064 AKT1S1Q96B36 256 aa19.56■□□□□ 0.72
CTDSP1-210ENST00000491064 TUBGCP6Q96RT7 1819 aa19.55■□□□□ 0.72
CTDSP1-210ENST00000491064 NME9Q86XW9 330 aa19.55■□□□□ 0.72
CTDSP1-210ENST00000491064 ANKRD24Q8TF21 1146 aa19.55■□□□□ 0.72
CTDSP1-210ENST00000491064 SLC16A10Q8TF71 515 aa19.55■□□□□ 0.72
CTDSP1-210ENST00000491064 CD163L1Q9NR16 1453 aa19.54■□□□□ 0.72
CTDSP1-210ENST00000491064 SBNO2Q9Y2G9 1366 aa19.54■□□□□ 0.72
CTDSP1-210ENST00000491064 PNPLA7Q6ZV29 1317 aa19.52■□□□□ 0.72
CTDSP1-210ENST00000491064 SLC27A3Q5K4L6 730 aa19.52■□□□□ 0.72
CTDSP1-210ENST00000491064 KLHL34Q8N239 644 aa19.52■□□□□ 0.72
CTDSP1-210ENST00000491064 CEP350Q5VT06 3117 aa19.51■□□□□ 0.71
CTDSP1-210ENST00000491064 POLD1P28340 1107 aa19.51■□□□□ 0.71
CTDSP1-210ENST00000491064 GIGYF1O75420 1035 aaPredicted RBP19.5■□□□□ 0.71
CTDSP1-210ENST00000491064 SHANK3Q9BYB0 1731 aa19.5■□□□□ 0.71
CTDSP1-210ENST00000491064 FAM208AQ9UK61 1670 aaKnown RBP19.49■□□□□ 0.71
CTDSP1-210ENST00000491064 LY75O60449 1722 aa19.49■□□□□ 0.71
CTDSP1-210ENST00000491064 PELP1Q8IZL8 1130 aaKnown RBP19.48■□□□□ 0.71
CTDSP1-210ENST00000491064 DDX54Q8TDD1 881 aaKnown RBP19.48■□□□□ 0.71
CTDSP1-210ENST00000491064 SIN3AQ96ST3 1273 aa19.48■□□□□ 0.71
CTDSP1-210ENST00000491064 DOT1LQ8TEK3 1739 aa19.48■□□□□ 0.71
CTDSP1-210ENST00000491064 NLGN2Q8NFZ4 835 aa19.47■□□□□ 0.71
CTDSP1-210ENST00000491064 TFCP2L1Q9NZI6 479 aa19.47■□□□□ 0.71
CTDSP1-210ENST00000491064 EDC4Q6P2E9 1401 aaKnown RBP19.47■□□□□ 0.71
CTDSP1-210ENST00000491064 KCNQ4P56696 695 aa19.46■□□□□ 0.71
CTDSP1-210ENST00000491064 HDGFL2Q7Z4V5 671 aaPredicted RBP19.46■□□□□ 0.71
CTDSP1-210ENST00000491064 TMC1Q8TDI8 760 aa19.46■□□□□ 0.71
CTDSP1-210ENST00000491064 IP6K1Q92551 441 aa19.45■□□□□ 0.7
CTDSP1-210ENST00000491064 NSD2O96028 1365 aa19.44■□□□□ 0.7
CTDSP1-210ENST00000491064 ANKRD36BQ8N2N9 1353 aa19.44■□□□□ 0.7
CTDSP1-210ENST00000491064 PRIM1P49642 420 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 161.3 ms