RNA–Protein interactions for RNA: ENST00000490787.1

PDCD11-205, Transcript of programmed cell death 11, humanhuman

Gene PDCD11, Length 101 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-205ENST00000490787 SOX12O15370 315 aa5.45□□□□□ -1.54
PDCD11-205ENST00000490787 GIGYF1O75420 1035 aaPredicted RBP5.45□□□□□ -1.54
PDCD11-205ENST00000490787 ZNF827Q17R98 1081 aa5.45□□□□□ -1.54
PDCD11-205ENST00000490787 NLGN2Q8NFZ4 835 aa5.45□□□□□ -1.54
PDCD11-205ENST00000490787 MTFR1LQ9H019 292 aa5.45□□□□□ -1.54
PDCD11-205ENST00000490787 CABP2Q9NPB3 220 aa5.45□□□□□ -1.54
PDCD11-205ENST00000490787 LRRC4BQ9NT99 713 aa5.45□□□□□ -1.54
PDCD11-205ENST00000490787 OVOS2A0A0G2JMS6 1433 aa5.45□□□□□ -1.54
PDCD11-205ENST00000490787 OVOS2A0A0J9YW53 1432 aa5.45□□□□□ -1.54
PDCD11-205ENST00000490787 OVOS2Q6IE36 1432 aa5.45□□□□□ -1.54
PDCD11-205ENST00000490787 KAT6BQ8WYB5 2073 aa5.44□□□□□ -1.54
PDCD11-205ENST00000490787 YBX3P16989 372 aaKnown RBP eCLIP5.44□□□□□ -1.54
PDCD11-205ENST00000490787 CRB1P82279 1406 aa5.44□□□□□ -1.54
PDCD11-205ENST00000490787 PARP4Q9UKK3 1724 aaKnown RBP5.44□□□□□ -1.54
PDCD11-205ENST00000490787 CCDC61Q9Y6R9 512 aa5.44□□□□□ -1.54
PDCD11-205ENST00000490787 EIF3AQ14152 1382 aaKnown RBP5.43□□□□□ -1.54
PDCD11-205ENST00000490787 NLRP6P59044 892 aa5.43□□□□□ -1.54
PDCD11-205ENST00000490787 NBPF1Q3BBV0 1214 aa5.43□□□□□ -1.54
PDCD11-205ENST00000490787 NLRP13Q86W25 1043 aa5.43□□□□□ -1.54
PDCD11-205ENST00000490787 LRRC37A3O60309 1634 aa5.43□□□□□ -1.54
PDCD11-205ENST00000490787 CSB-PGBD3P0DP91 1061 aa5.42□□□□□ -1.54
PDCD11-205ENST00000490787 ZNF526Q8TF50 670 aaPredicted RBP5.42□□□□□ -1.54
PDCD11-205ENST00000490787 CABP1Q9NZU7 370 aa5.42□□□□□ -1.54
PDCD11-205ENST00000490787 WDR17Q8IZU2 1322 aa5.42□□□□□ -1.54
PDCD11-205ENST00000490787 AATKQ6ZMQ8 1374 aa5.42□□□□□ -1.54
PDCD11-205ENST00000490787 SHANK3Q9BYB0 1731 aa5.41□□□□□ -1.54
PDCD11-205ENST00000490787 EXOC5O00471 708 aa5.41□□□□□ -1.54
PDCD11-205ENST00000490787 SRPK2P78362 688 aaKnown RBP5.41□□□□□ -1.54
PDCD11-205ENST00000490787 ARHGEF25Q86VW2 580 aa5.41□□□□□ -1.54
PDCD11-205ENST00000490787 AKT1S1Q96B36 256 aa5.41□□□□□ -1.54
PDCD11-205ENST00000490787 CARD10Q9BWT7 1032 aa5.41□□□□□ -1.54
PDCD11-205ENST00000490787 WWC3Q9ULE0 1092 aa5.41□□□□□ -1.54
PDCD11-205ENST00000490787 COL18A1P39060 1754 aa5.41□□□□□ -1.54
PDCD11-205ENST00000490787 BCL9O00512 1426 aa5.4□□□□□ -1.54
PDCD11-205ENST00000490787 PPIP5K1Q6PFW1 1433 aa5.4□□□□□ -1.54
PDCD11-205ENST00000490787 ARHGEF28Q8N1W1 1705 aaKnown RBP5.4□□□□□ -1.54
PDCD11-205ENST00000490787 RGPD3A6NKT7 1758 aaPredicted RBP5.4□□□□□ -1.54
PDCD11-205ENST00000490787 RGPD4Q7Z3J3 1758 aa5.4□□□□□ -1.54
PDCD11-205ENST00000490787 RGPD5Q99666 1765 aa5.4□□□□□ -1.54
PDCD11-205ENST00000490787 C11orf95C9JLR9 678 aaPredicted RBP5.4□□□□□ -1.54
PDCD11-205ENST00000490787 MSL1Q68DK7 614 aa5.4□□□□□ -1.54
PDCD11-205ENST00000490787 PNPLA7Q6ZV29 1317 aa5.4□□□□□ -1.55
PDCD11-205ENST00000490787 TOPAZ1Q8N9V7 1692 aa5.4□□□□□ -1.55
PDCD11-205ENST00000490787 MAP3K5Q99683 1374 aa5.4□□□□□ -1.55
PDCD11-205ENST00000490787 USP6P35125 1406 aa5.4□□□□□ -1.55
PDCD11-205ENST00000490787 ATP10DQ9P241 1426 aa5.4□□□□□ -1.55
PDCD11-205ENST00000490787 SMIM5Q71RC9 77 aa5.39□□□□□ -1.55
PDCD11-205ENST00000490787 NLRP2Q9NX02 1062 aa5.39□□□□□ -1.55
PDCD11-205ENST00000490787 TFCP2L1Q9NZI6 479 aa5.39□□□□□ -1.55
PDCD11-205ENST00000490787 ITSN1Q15811 1721 aa5.39□□□□□ -1.55
PDCD11-205ENST00000490787 SLIT3O75094 1523 aa5.38□□□□□ -1.55
PDCD11-205ENST00000490787 PAPPAQ13219 1627 aa5.38□□□□□ -1.55
PDCD11-205ENST00000490787 HSPA6P17066 643 aa5.38□□□□□ -1.55
PDCD11-205ENST00000490787 PRIM1P49642 420 aaKnown RBP5.38□□□□□ -1.55
PDCD11-205ENST00000490787 COL23A1Q86Y22 540 aaPredicted RBP5.38□□□□□ -1.55
PDCD11-205ENST00000490787 DDX54Q8TDD1 881 aaKnown RBP5.38□□□□□ -1.55
PDCD11-205ENST00000490787 CDCA7Q9BWT1 371 aaPredicted RBP5.38□□□□□ -1.55
PDCD11-205ENST00000490787 TTC21BQ7Z4L5 1316 aa5.38□□□□□ -1.55
PDCD11-205ENST00000490787 RAB3GAP2Q9H2M9 1393 aa5.38□□□□□ -1.55
PDCD11-205ENST00000490787 CPSF1Q10570 1443 aaKnown RBP5.38□□□□□ -1.55
PDCD11-205ENST00000490787 PCNTO95613 3336 aa5.38□□□□□ -1.55
PDCD11-205ENST00000490787 PIK3C2AO00443 1686 aa5.37□□□□□ -1.55
PDCD11-205ENST00000490787 AKAP12Q02952 1782 aa5.37□□□□□ -1.55
PDCD11-205ENST00000490787 WNK3Q9BYP7 1800 aa5.37□□□□□ -1.55
PDCD11-205ENST00000490787 MSH5O43196 834 aa5.37□□□□□ -1.55
PDCD11-205ENST00000490787 CAPN15O75808 1086 aa5.37□□□□□ -1.55
PDCD11-205ENST00000490787 POLD1P28340 1107 aa5.37□□□□□ -1.55
PDCD11-205ENST00000490787 AMIGO3Q86WK7 504 aa5.37□□□□□ -1.55
PDCD11-205ENST00000490787 GPBP1L1Q9HC44 474 aaPredicted RBP5.37□□□□□ -1.55
PDCD11-205ENST00000490787 TNS2Q63HR2 1409 aa5.37□□□□□ -1.55
PDCD11-205ENST00000490787 BTAF1O14981 1849 aa5.37□□□□□ -1.55
PDCD11-205ENST00000490787 FBLN1P23142 703 aa5.36□□□□□ -1.55
PDCD11-205ENST00000490787 HTRA3P83110 453 aa5.36□□□□□ -1.55
PDCD11-205ENST00000490787 NME9Q86XW9 330 aa5.36□□□□□ -1.55
PDCD11-205ENST00000490787 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.36□□□□□ -1.55
PDCD11-205ENST00000490787 DNAJC5GQ8N7S2 189 aa5.36□□□□□ -1.55
PDCD11-205ENST00000490787 SYTL4Q96C24 671 aaPredicted RBP5.36□□□□□ -1.55
PDCD11-205ENST00000490787 LTV1Q96GA3 475 aaPredicted RBP5.36□□□□□ -1.55
PDCD11-205ENST00000490787 CENPJQ9HC77 1338 aaPredicted RBP5.36□□□□□ -1.55
PDCD11-205ENST00000490787 BRD4O60885 1362 aaPredicted RBP5.36□□□□□ -1.55
PDCD11-205ENST00000490787 NHSQ6T4R5 1651 aa5.36□□□□□ -1.55
PDCD11-205ENST00000490787 TUBGCP6Q96RT7 1819 aa5.36□□□□□ -1.55
PDCD11-205ENST00000490787 NFAT5O94916 1531 aa5.35□□□□□ -1.55
PDCD11-205ENST00000490787 KIF3CO14782 793 aa5.35□□□□□ -1.55
PDCD11-205ENST00000490787 GRIN3BO60391 1043 aa5.35□□□□□ -1.55
PDCD11-205ENST00000490787 IL2RBP14784 551 aa5.35□□□□□ -1.55
PDCD11-205ENST00000490787 COL13A1Q5TAT6 717 aaPredicted RBP5.35□□□□□ -1.55
PDCD11-205ENST00000490787 ANKRD24Q8TF21 1146 aa5.35□□□□□ -1.55
PDCD11-205ENST00000490787 SLC16A10Q8TF71 515 aa5.35□□□□□ -1.55
PDCD11-205ENST00000490787 TRPM1Q7Z4N2 1603 aa5.34□□□□□ -1.55
PDCD11-205ENST00000490787 ADCY9O60503 1353 aa5.34□□□□□ -1.55
PDCD11-205ENST00000490787 NSD2O96028 1365 aa5.34□□□□□ -1.55
PDCD11-205ENST00000490787 CCDC7Q96M83 1385 aa5.34□□□□□ -1.55
PDCD11-205ENST00000490787 ERBB3P21860 1342 aa5.34□□□□□ -1.55
PDCD11-205ENST00000490787 SLC27A3Q5K4L6 730 aa5.34□□□□□ -1.55
PDCD11-205ENST00000490787 KCNH5Q8NCM2 988 aa5.34□□□□□ -1.55
PDCD11-205ENST00000490787 CCNL1Q9UK58 526 aaPredicted RBP5.34□□□□□ -1.55
PDCD11-205ENST00000490787 STAC3Q96MF2 364 aa5.33□□□□□ -1.56
PDCD11-205ENST00000490787 COL24A1Q17RW2 1714 aa5.33□□□□□ -1.56
PDCD11-205ENST00000490787 ABCC6O95255 1503 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms