RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 RGPD5Q99666 1765 aa14.58□□□□□ -0.08
RBM39-236ENST00000490484 TERF2IPQ9NYB0 399 aa14.58□□□□□ -0.08
RBM39-236ENST00000490484 USP31Q70CQ4 1352 aa14.58□□□□□ -0.08
RBM39-236ENST00000490484 NINLQ9Y2I6 1382 aa14.58□□□□□ -0.08
RBM39-236ENST00000490484 LTN1O94822 1766 aa14.57□□□□□ -0.08
RBM39-236ENST00000490484 ABCC6O95255 1503 aa14.57□□□□□ -0.08
RBM39-236ENST00000490484 TOM1L2Q6ZVM7 507 aa14.57□□□□□ -0.08
RBM39-236ENST00000490484 ARHGEF25Q86VW2 580 aa14.57□□□□□ -0.08
RBM39-236ENST00000490484 AXIN2Q9Y2T1 843 aa14.57□□□□□ -0.08
RBM39-236ENST00000490484 THRAP3Q9Y2W1 955 aaKnown RBP14.57□□□□□ -0.08
RBM39-236ENST00000490484 BAG6P46379 1132 aa14.56□□□□□ -0.08
RBM39-236ENST00000490484 PDE3BQ13370 1112 aa14.56□□□□□ -0.08
RBM39-236ENST00000490484 PUS7Q96PZ0 661 aaKnown RBP14.56□□□□□ -0.08
RBM39-236ENST00000490484 WDR17Q8IZU2 1322 aa14.56□□□□□ -0.08
RBM39-236ENST00000490484 CLSPNQ9HAW4 1339 aa14.56□□□□□ -0.08
RBM39-236ENST00000490484 OVOS2A0A0J9YW53 1432 aa14.56□□□□□ -0.08
RBM39-236ENST00000490484 OVOS2Q6IE36 1432 aa14.56□□□□□ -0.08
RBM39-236ENST00000490484 CSB-PGBD3P0DP91 1061 aa14.55□□□□□ -0.08
RBM39-236ENST00000490484 TRIM37O94972 964 aa14.54□□□□□ -0.08
RBM39-236ENST00000490484 FAM196AQ6ZSG2 479 aa14.54□□□□□ -0.08
RBM39-236ENST00000490484 DISP2A7MBM2 1401 aa14.54□□□□□ -0.08
RBM39-236ENST00000490484 ANKRD36BQ8N2N9 1353 aa14.53□□□□□ -0.08
RBM39-236ENST00000490484 SLC24A1O60721 1099 aa14.53□□□□□ -0.08
RBM39-236ENST00000490484 TMF1P82094 1093 aa14.53□□□□□ -0.08
RBM39-236ENST00000490484 EN1Q05925 392 aaPredicted RBP14.53□□□□□ -0.08
RBM39-236ENST00000490484 TIMELESSQ9UNS1 1208 aa14.52□□□□□ -0.09
RBM39-236ENST00000490484 PEAK1Q9H792 1746 aa14.52□□□□□ -0.09
RBM39-236ENST00000490484 OVOS2A0A0G2JMS6 1433 aa14.51□□□□□ -0.09
RBM39-236ENST00000490484 MYOM1P52179 1685 aa14.51□□□□□ -0.09
RBM39-236ENST00000490484 ERBB3P21860 1342 aa14.5□□□□□ -0.09
RBM39-236ENST00000490484 DDB1Q16531 1140 aa14.5□□□□□ -0.09
RBM39-236ENST00000490484 CCER1Q8TC90 406 aaPredicted RBP14.5□□□□□ -0.09
RBM39-236ENST00000490484 CARD10Q9BWT7 1032 aa14.49□□□□□ -0.09
RBM39-236ENST00000490484 CCDC7Q96M83 1385 aa14.48□□□□□ -0.09
RBM39-236ENST00000490484 APBA3O96018 575 aa14.48□□□□□ -0.09
RBM39-236ENST00000490484 EZH2Q15910 746 aaKnown RBP14.48□□□□□ -0.09
RBM39-236ENST00000490484 RREB1Q92766 1687 aa14.48□□□□□ -0.09
RBM39-236ENST00000490484 KIF20BQ96Q89 1820 aa14.48□□□□□ -0.09
RBM39-236ENST00000490484 PSDA5PKW4 1024 aaPredicted RBP14.47□□□□□ -0.09
RBM39-236ENST00000490484 CDCA8Q53HL2 280 aa14.47□□□□□ -0.09
RBM39-236ENST00000490484 COG3Q96JB2 828 aa14.47□□□□□ -0.09
RBM39-236ENST00000490484 CDCA7Q9BWT1 371 aaPredicted RBP14.47□□□□□ -0.09
RBM39-236ENST00000490484 TNS2Q63HR2 1409 aa14.47□□□□□ -0.09
RBM39-236ENST00000490484 NUP188Q5SRE5 1749 aa14.46□□□□□ -0.09
RBM39-236ENST00000490484 FAM208AQ9UK61 1670 aaKnown RBP14.46□□□□□ -0.09
RBM39-236ENST00000490484 NLRP2Q9NX02 1062 aa14.46□□□□□ -0.09
RBM39-236ENST00000490484 PARD3Q8TEW0 1356 aa14.46□□□□□ -0.1
RBM39-236ENST00000490484 SBF2Q86WG5 1849 aa14.45□□□□□ -0.1
RBM39-236ENST00000490484 ANKRD24Q8TF21 1146 aa14.45□□□□□ -0.1
RBM39-236ENST00000490484 CAMKK2Q96RR4 588 aa14.45□□□□□ -0.1
RBM39-236ENST00000490484 C11orf95C9JLR9 678 aaPredicted RBP14.44□□□□□ -0.1
RBM39-236ENST00000490484 MAP3K19Q56UN5 1328 aa14.43□□□□□ -0.1
RBM39-236ENST00000490484 MARCH10Q8NA82 808 aaPredicted RBP14.43□□□□□ -0.1
RBM39-236ENST00000490484 LTV1Q96GA3 475 aaPredicted RBP14.43□□□□□ -0.1
RBM39-236ENST00000490484 GGNBP2Q9H3C7 697 aa14.43□□□□□ -0.1
RBM39-236ENST00000490484 LRP5O75197 1615 aa14.43□□□□□ -0.1
RBM39-236ENST00000490484 RGPD3A6NKT7 1758 aaPredicted RBP14.42□□□□□ -0.1
RBM39-236ENST00000490484 RGPD4Q7Z3J3 1758 aa14.42□□□□□ -0.1
RBM39-236ENST00000490484 NSD3Q9BZ95 1437 aa14.42□□□□□ -0.1
RBM39-236ENST00000490484 FBLN1P23142 703 aa14.42□□□□□ -0.1
RBM39-236ENST00000490484 R3HDM1Q15032 1099 aaKnown RBP14.42□□□□□ -0.1
RBM39-236ENST00000490484 IP6K1Q92551 441 aa14.42□□□□□ -0.1
RBM39-236ENST00000490484 BCL9O00512 1426 aa14.41□□□□□ -0.1
RBM39-236ENST00000490484 EXOC5O00471 708 aa14.41□□□□□ -0.1
RBM39-236ENST00000490484 FYB1O15117 783 aa14.41□□□□□ -0.1
RBM39-236ENST00000490484 IL2RBP14784 551 aa14.41□□□□□ -0.1
RBM39-236ENST00000490484 HOXC9P31274 260 aa14.41□□□□□ -0.1
RBM39-236ENST00000490484 AMPHP49418 695 aa14.41□□□□□ -0.1
RBM39-236ENST00000490484 POLR3GLQ9BT43 218 aa14.41□□□□□ -0.1
RBM39-236ENST00000490484 RTL1A6NKG5 1358 aa14.41□□□□□ -0.1
RBM39-236ENST00000490484 NHSQ6T4R5 1651 aa14.4□□□□□ -0.1
RBM39-236ENST00000490484 RRS1Q15050 365 aaKnown RBP14.4□□□□□ -0.1
RBM39-236ENST00000490484 PTF1AQ7RTS3 328 aa14.4□□□□□ -0.1
RBM39-236ENST00000490484 RGPD2P0DJD1 1756 aa14.39□□□□□ -0.11
RBM39-236ENST00000490484 EIF4G2P78344 907 aaKnown RBP eCLIP14.38□□□□□ -0.11
RBM39-236ENST00000490484 CARD14Q9BXL6 1004 aa14.38□□□□□ -0.11
RBM39-236ENST00000490484 BCL11BQ9C0K0 894 aaPredicted RBP14.38□□□□□ -0.11
RBM39-236ENST00000490484 HSPA5P11021 654 aaKnown RBP14.37□□□□□ -0.11
RBM39-236ENST00000490484 SMG6Q86US8 1419 aaKnown RBP14.37□□□□□ -0.11
RBM39-236ENST00000490484 MEGF6O75095 1541 aa14.36□□□□□ -0.11
RBM39-236ENST00000490484 ACSBG1Q96GR2 724 aa14.35□□□□□ -0.11
RBM39-236ENST00000490484 SHANK3Q9BYB0 1731 aa14.35□□□□□ -0.11
RBM39-236ENST00000490484 ANKRD26Q9UPS8 1709 aa14.35□□□□□ -0.11
RBM39-236ENST00000490484 FLT4P35916 1363 aa14.34□□□□□ -0.11
RBM39-236ENST00000490484 PLSCR1O15162 318 aa14.34□□□□□ -0.11
RBM39-236ENST00000490484 KCNQ2O43526 872 aa14.34□□□□□ -0.11
RBM39-236ENST00000490484 NBPF14Q5TI25 921 aa14.34□□□□□ -0.11
RBM39-236ENST00000490484 CGNL1Q0VF96 1302 aa14.34□□□□□ -0.11
RBM39-236ENST00000490484 USHBP1Q8N6Y0 703 aa14.33□□□□□ -0.12
RBM39-236ENST00000490484 BTAF1O14981 1849 aa14.33□□□□□ -0.12
RBM39-236ENST00000490484 KIF24Q5T7B8 1368 aa14.33□□□□□ -0.12
RBM39-236ENST00000490484 DOT1LQ8TEK3 1739 aa14.32□□□□□ -0.12
RBM39-236ENST00000490484 HSP90AB2PQ58FF8 381 aa14.32□□□□□ -0.12
RBM39-236ENST00000490484 NBPF6Q5VWK0 638 aa14.32□□□□□ -0.12
RBM39-236ENST00000490484 DDX54Q8TDD1 881 aaKnown RBP14.32□□□□□ -0.12
RBM39-236ENST00000490484 NBPF4Q96M43 638 aa14.32□□□□□ -0.12
RBM39-236ENST00000490484 ANO8Q9HCE9 1232 aaPredicted RBP14.32□□□□□ -0.12
RBM39-236ENST00000490484 EMILIN1Q9Y6C2 1016 aa14.32□□□□□ -0.12
RBM39-236ENST00000490484 INSRP06213 1382 aa14.32□□□□□ -0.12
RBM39-236ENST00000490484 PPM1GO15355 546 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms