RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 DXOO77932 396 aaKnown RBP8.48□□□□□ -1.05
SSX2IP-208ENST00000490476 MAFBQ9Y5Q3 323 aaPredicted RBP8.48□□□□□ -1.05
SSX2IP-208ENST00000490476 CARNS1A5YM72 827 aa8.47□□□□□ -1.05
SSX2IP-208ENST00000490476 PIK3CDO00329 1044 aa8.47□□□□□ -1.05
SSX2IP-208ENST00000490476 KCNH2Q12809 1159 aa8.47□□□□□ -1.05
SSX2IP-208ENST00000490476 EVA1BQ9NVM1 165 aa8.47□□□□□ -1.05
SSX2IP-208ENST00000490476 ZC3H4Q9UPT8 1303 aaKnown RBP8.47□□□□□ -1.05
SSX2IP-208ENST00000490476 ATP9BO43861 1147 aa8.46□□□□□ -1.06
SSX2IP-208ENST00000490476 SRPK2P78362 688 aaKnown RBP8.46□□□□□ -1.06
SSX2IP-208ENST00000490476 PDE4CQ08493 712 aa8.46□□□□□ -1.06
SSX2IP-208ENST00000490476 ARMC2Q8NEN0 867 aa8.46□□□□□ -1.06
SSX2IP-208ENST00000490476 MTRQ99707 1265 aa8.46□□□□□ -1.06
SSX2IP-208ENST00000490476 PCDHB9Q9Y5E1 797 aa8.46□□□□□ -1.06
SSX2IP-208ENST00000490476 PCF11O94913 1555 aaKnown RBP8.46□□□□□ -1.06
SSX2IP-208ENST00000490476 ZPR1O75312 459 aa8.45□□□□□ -1.06
SSX2IP-208ENST00000490476 SKIP12755 728 aa8.45□□□□□ -1.06
SSX2IP-208ENST00000490476 MMP16P51512 607 aa8.45□□□□□ -1.06
SSX2IP-208ENST00000490476 PTK2Q05397 1052 aa8.45□□□□□ -1.06
SSX2IP-208ENST00000490476 ADH1BP00325 375 aa8.44□□□□□ -1.06
SSX2IP-208ENST00000490476 AQRO60306 1485 aaKnown RBP eCLIP8.44□□□□□ -1.064e-7■□□□□ 9.9
SSX2IP-208ENST00000490476 NBPF14Q5TI25 921 aa8.43□□□□□ -1.06
SSX2IP-208ENST00000490476 PDXDC2PQ6P474 469 aa8.43□□□□□ -1.06
SSX2IP-208ENST00000490476 DEPDC4Q8N2C3 294 aa8.43□□□□□ -1.06
SSX2IP-208ENST00000490476 ZNF516Q92618 1163 aa8.43□□□□□ -1.06
SSX2IP-208ENST00000490476 VRTNQ9H8Y1 702 aa8.43□□□□□ -1.06
SSX2IP-208ENST00000490476 MAPKBP1O60336 1514 aa8.43□□□□□ -1.06
SSX2IP-208ENST00000490476 PRDM2Q13029 1718 aa8.43□□□□□ -1.06
SSX2IP-208ENST00000490476 KCNC4Q03721 635 aa8.42□□□□□ -1.06
SSX2IP-208ENST00000490476 SLFNL1Q499Z3 407 aa8.42□□□□□ -1.06
SSX2IP-208ENST00000490476 PTCRAQ6ISU1 281 aaPredicted RBP8.42□□□□□ -1.06
SSX2IP-208ENST00000490476 ARHGAP9Q9BRR9 750 aa8.42□□□□□ -1.06
SSX2IP-208ENST00000490476 SLC6A16Q9GZN6 736 aa8.42□□□□□ -1.06
SSX2IP-208ENST00000490476 CCDC9Q9Y3X0 531 aaKnown RBP8.42□□□□□ -1.06
SSX2IP-208ENST00000490476 TARBP1Q13395 1621 aaKnown RBP8.41□□□□□ -1.06
SSX2IP-208ENST00000490476 MED1Q15648 1581 aaPredicted RBP8.41□□□□□ -1.06
SSX2IP-208ENST00000490476 ZBTB33Q86T24 672 aa8.41□□□□□ -1.06
SSX2IP-208ENST00000490476 FAM174AQ8TBP5 190 aa8.41□□□□□ -1.06
SSX2IP-208ENST00000490476 CARD14Q9BXL6 1004 aa8.41□□□□□ -1.06
SSX2IP-208ENST00000490476 GZF1Q9H116 711 aaPredicted RBP8.41□□□□□ -1.06
SSX2IP-208ENST00000490476 UNC93B1Q9H1C4 597 aa8.41□□□□□ -1.06
SSX2IP-208ENST00000490476 USTQ9Y2C2 406 aa8.41□□□□□ -1.06
SSX2IP-208ENST00000490476 SNAPC4Q5SXM2 1469 aa8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 MAGEB6P1A0A0J9YX57 407 aa8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 USP17L3A6NCW0 530 aa8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 USP17L4A6NCW7 530 aa8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 ATG7O95352 703 aa8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 USP17L2Q6R6M4 530 aa8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 USP17L1Q7RTZ2 530 aa8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 RNF135Q8IUD6 432 aa8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 ADAM32Q8TC27 787 aa8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 GPKOWQ92917 476 aaPredicted RBP eCLIP8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 OCSTAMPQ9BR26 566 aa8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 IL21Q9HBE4 155 aa8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 CEP126Q9P2H0 1117 aa8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 GPSM3Q9Y4H4 160 aa8.4□□□□□ -1.06
SSX2IP-208ENST00000490476 USP17L5A8MUK1 530 aa8.39□□□□□ -1.07
SSX2IP-208ENST00000490476 AGERQ15109 404 aa8.39□□□□□ -1.07
SSX2IP-208ENST00000490476 NKX2-3Q8TAU0 364 aa8.39□□□□□ -1.07
SSX2IP-208ENST00000490476 PPRC1Q5VV67 1664 aaKnown RBP8.39□□□□□ -1.07
SSX2IP-208ENST00000490476 LINC01559Q495D7 138 aa8.38□□□□□ -1.07
SSX2IP-208ENST00000490476 TJAP1Q5JTD0 557 aa8.38□□□□□ -1.07
SSX2IP-208ENST00000490476 KANK4Q5T7N3 995 aaPredicted RBP8.38□□□□□ -1.07
SSX2IP-208ENST00000490476 DZIP3Q86Y13 1208 aaKnown RBP8.38□□□□□ -1.07
SSX2IP-208ENST00000490476 NFATC2IPQ8NCF5 419 aa8.38□□□□□ -1.07
SSX2IP-208ENST00000490476 S1PR4O95977 384 aa8.37□□□□□ -1.07
SSX2IP-208ENST00000490476 BAP1Q92560 729 aa8.37□□□□□ -1.07
SSX2IP-208ENST00000490476 ZNF592Q92610 1267 aa8.37□□□□□ -1.07
SSX2IP-208ENST00000490476 BRD1O95696 1058 aa8.36□□□□□ -1.07
SSX2IP-208ENST00000490476 NCOA4Q13772 614 aa8.36□□□□□ -1.07
SSX2IP-208ENST00000490476 MKRN1Q9UHC7 482 aaKnown RBP8.36□□□□□ -1.07
SSX2IP-208ENST00000490476 FCF1Q9Y324 198 aaKnown RBP8.36□□□□□ -1.07
SSX2IP-208ENST00000490476 CFTRP13569 1480 aa8.35□□□□□ -1.07
SSX2IP-208ENST00000490476 MCCD1P59942 119 aaPredicted RBP8.35□□□□□ -1.07
SSX2IP-208ENST00000490476 SH3BP5LQ7L8J4 393 aa8.35□□□□□ -1.07
SSX2IP-208ENST00000490476 PLPP7Q8NBV4 271 aa8.35□□□□□ -1.07
SSX2IP-208ENST00000490476 NOVA2Q9UNW9 492 aaKnown RBP8.35□□□□□ -1.07
SSX2IP-208ENST00000490476 TOPBP1Q92547 1522 aa8.34□□□□□ -1.07
SSX2IP-208ENST00000490476 TMEM88BA6NKF7 163 aa8.34□□□□□ -1.07
SSX2IP-208ENST00000490476 RASA1P20936 1047 aa8.34□□□□□ -1.07
SSX2IP-208ENST00000490476 TSGA10IPQ3SY00 556 aa8.34□□□□□ -1.07
SSX2IP-208ENST00000490476 TMCO4Q5TGY1 634 aa8.34□□□□□ -1.07
SSX2IP-208ENST00000490476 LARP1Q6PKG0 1096 aaKnown RBP8.34□□□□□ -1.07
SSX2IP-208ENST00000490476 PLEKHM2Q8IWE5 1019 aa8.34□□□□□ -1.07
SSX2IP-208ENST00000490476 STK32AQ8WU08 396 aa8.34□□□□□ -1.07
SSX2IP-208ENST00000490476 FOXJ1Q92949 421 aa8.34□□□□□ -1.07
SSX2IP-208ENST00000490476 IRX2Q9BZI1 471 aaPredicted RBP8.33□□□□□ -1.08
SSX2IP-208ENST00000490476 ZMIZ1Q9ULJ6 1067 aa8.33□□□□□ -1.08
SSX2IP-208ENST00000490476 KIF21BO75037 1637 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 CEP170Q5SW79 1584 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 USP17L15C9J2P7 530 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 PATL2C9JE40 543 aaKnown RBP8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 USP17L10C9JJH3 530 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 USP17L13C9JLJ4 530 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 USP17L12C9JPN9 530 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 USP17L11C9JVI0 530 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 USP17L21D6R901 530 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 USP17L18D6R9N7 530 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 USP17L22D6RA61 530 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 USP17L17D6RBQ6 530 aa8.32□□□□□ -1.08
SSX2IP-208ENST00000490476 USP17L19D6RCP7 530 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms