RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 HDGFL2Q7Z4V5 671 aaPredicted RBP14.64□□□□□ -0.07
TTC28-207ENST00000490475 ARHGEF25Q86VW2 580 aa14.64□□□□□ -0.07
TTC28-207ENST00000490475 CAMKK2Q96RR4 588 aa14.64□□□□□ -0.07
TTC28-207ENST00000490475 OVOS2A0A0G2JMS6 1433 aa14.64□□□□□ -0.07
TTC28-207ENST00000490475 OVOS2A0A0J9YW53 1432 aa14.64□□□□□ -0.07
TTC28-207ENST00000490475 OVOS2Q6IE36 1432 aa14.64□□□□□ -0.07
TTC28-207ENST00000490475 DDB1Q16531 1140 aa14.63□□□□□ -0.07
TTC28-207ENST00000490475 CCER1Q8TC90 406 aaPredicted RBP14.63□□□□□ -0.07
TTC28-207ENST00000490475 EZH2Q15910 746 aaKnown RBP14.62□□□□□ -0.07
TTC28-207ENST00000490475 MON2Q7Z3U7 1717 aa14.62□□□□□ -0.07
TTC28-207ENST00000490475 TERF2IPQ9NYB0 399 aa14.62□□□□□ -0.07
TTC28-207ENST00000490475 COL18A1P39060 1754 aa14.62□□□□□ -0.07
TTC28-207ENST00000490475 NINLQ9Y2I6 1382 aa14.61□□□□□ -0.07
TTC28-207ENST00000490475 PSDA5PKW4 1024 aaPredicted RBP14.61□□□□□ -0.07
TTC28-207ENST00000490475 CSB-PGBD3P0DP91 1061 aa14.61□□□□□ -0.07
TTC28-207ENST00000490475 CARD10Q9BWT7 1032 aa14.61□□□□□ -0.07
TTC28-207ENST00000490475 USP31Q70CQ4 1352 aa14.6□□□□□ -0.07
TTC28-207ENST00000490475 CCDC7Q96M83 1385 aa14.6□□□□□ -0.07
TTC28-207ENST00000490475 BCL9O00512 1426 aa14.59□□□□□ -0.07
TTC28-207ENST00000490475 USP54Q70EL1 1684 aa14.59□□□□□ -0.07
TTC28-207ENST00000490475 R3HDM1Q15032 1099 aaKnown RBP14.59□□□□□ -0.07
TTC28-207ENST00000490475 TMC1Q8TDI8 760 aa14.59□□□□□ -0.07
TTC28-207ENST00000490475 RGPD3A6NKT7 1758 aaPredicted RBP14.59□□□□□ -0.07
TTC28-207ENST00000490475 RGPD4Q7Z3J3 1758 aa14.59□□□□□ -0.07
TTC28-207ENST00000490475 RREB1Q92766 1687 aa14.58□□□□□ -0.07
TTC28-207ENST00000490475 EDC4Q6P2E9 1401 aaKnown RBP14.58□□□□□ -0.07
TTC28-207ENST00000490475 NFAT5O94916 1531 aa14.58□□□□□ -0.08
TTC28-207ENST00000490475 WNK3Q9BYP7 1800 aa14.58□□□□□ -0.08
TTC28-207ENST00000490475 PLSCR1O15162 318 aa14.58□□□□□ -0.08
TTC28-207ENST00000490475 AXIN2Q9Y2T1 843 aa14.58□□□□□ -0.08
TTC28-207ENST00000490475 LRRC37A3O60309 1634 aa14.58□□□□□ -0.08
TTC28-207ENST00000490475 EXOC5O00471 708 aa14.57□□□□□ -0.08
TTC28-207ENST00000490475 CLSPNQ9HAW4 1339 aa14.57□□□□□ -0.08
TTC28-207ENST00000490475 PEAK1Q9H792 1746 aa14.56□□□□□ -0.08
TTC28-207ENST00000490475 RGPD5Q99666 1765 aa14.56□□□□□ -0.08
TTC28-207ENST00000490475 SOX12O15370 315 aa14.56□□□□□ -0.08
TTC28-207ENST00000490475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.56□□□□□ -0.083e-6■■□□□ 14.2
TTC28-207ENST00000490475 BCL11BQ9C0K0 894 aaPredicted RBP14.56□□□□□ -0.08
TTC28-207ENST00000490475 SBF2Q86WG5 1849 aa14.56□□□□□ -0.08
TTC28-207ENST00000490475 NUP188Q5SRE5 1749 aa14.55□□□□□ -0.08
TTC28-207ENST00000490475 SLC12A5Q9H2X9 1139 aa14.54□□□□□ -0.08
TTC28-207ENST00000490475 CD163L1Q9NR16 1453 aa14.54□□□□□ -0.08
TTC28-207ENST00000490475 ERBB3P21860 1342 aa14.53□□□□□ -0.08
TTC28-207ENST00000490475 LTN1O94822 1766 aa14.52□□□□□ -0.08
TTC28-207ENST00000490475 NME9Q86XW9 330 aa14.52□□□□□ -0.09
TTC28-207ENST00000490475 TIMELESSQ9UNS1 1208 aa14.52□□□□□ -0.09
TTC28-207ENST00000490475 TNS2Q63HR2 1409 aa14.51□□□□□ -0.09
TTC28-207ENST00000490475 A0A1W2PP64 1363 aa14.51□□□□□ -0.09
TTC28-207ENST00000490475 CDCA8Q53HL2 280 aa14.51□□□□□ -0.09
TTC28-207ENST00000490475 MARCH10Q8NA82 808 aaPredicted RBP14.51□□□□□ -0.09
TTC28-207ENST00000490475 NLRP2Q9NX02 1062 aa14.51□□□□□ -0.09
TTC28-207ENST00000490475 FAM208AQ9UK61 1670 aaKnown RBP14.5□□□□□ -0.09
TTC28-207ENST00000490475 ST20-MTHFSA0A0A6YYL1 179 aa14.5□□□□□ -0.09
TTC28-207ENST00000490475 IL2RBP14784 551 aa14.5□□□□□ -0.09
TTC28-207ENST00000490475 COG3Q96JB2 828 aa14.5□□□□□ -0.09
TTC28-207ENST00000490475 TESK2Q96S53 571 aa14.5□□□□□ -0.09
TTC28-207ENST00000490475 SPON1Q9HCB6 807 aa14.5□□□□□ -0.09
TTC28-207ENST00000490475 TMF1P82094 1093 aa14.49□□□□□ -0.09
TTC28-207ENST00000490475 ANKRD24Q8TF21 1146 aa14.48□□□□□ -0.09
TTC28-207ENST00000490475 IP6K1Q92551 441 aa14.48□□□□□ -0.09
TTC28-207ENST00000490475 ANKRD36BQ8N2N9 1353 aa14.47□□□□□ -0.09
TTC28-207ENST00000490475 DCAF8L1A6NGE4 600 aa14.47□□□□□ -0.09
TTC28-207ENST00000490475 KCNQ2O43526 872 aa14.47□□□□□ -0.09
TTC28-207ENST00000490475 PPP1R1BQ9UD71 204 aaPredicted RBP14.47□□□□□ -0.09
TTC28-207ENST00000490475 KAT6BQ8WYB5 2073 aa14.46□□□□□ -0.09
TTC28-207ENST00000490475 NHSQ6T4R5 1651 aa14.45□□□□□ -0.1
TTC28-207ENST00000490475 USP47Q96K76 1375 aa14.45□□□□□ -0.1
TTC28-207ENST00000490475 AMPHP49418 695 aa14.44□□□□□ -0.1
TTC28-207ENST00000490475 STK32BQ9NY57 414 aa14.44□□□□□ -0.1
TTC28-207ENST00000490475 RTL1A6NKG5 1358 aa14.44□□□□□ -0.1
TTC28-207ENST00000490475 HMGB2P26583 209 aaKnown RBP14.43□□□□□ -0.1
TTC28-207ENST00000490475 TXNRD1Q16881 649 aa14.43□□□□□ -0.1
TTC28-207ENST00000490475 CGNL1Q0VF96 1302 aa14.41□□□□□ -0.1
TTC28-207ENST00000490475 SMG6Q86US8 1419 aaKnown RBP14.41□□□□□ -0.1
TTC28-207ENST00000490475 KIF24Q5T7B8 1368 aa14.41□□□□□ -0.1
TTC28-207ENST00000490475 MAP3K19Q56UN5 1328 aa14.41□□□□□ -0.1
TTC28-207ENST00000490475 HOXC9P31274 260 aa14.4□□□□□ -0.1
TTC28-207ENST00000490475 SLC15A2Q16348 729 aa14.4□□□□□ -0.1
TTC28-207ENST00000490475 PROM2Q8N271 834 aa14.4□□□□□ -0.1
TTC28-207ENST00000490475 PTF1AQ7RTS3 328 aa14.39□□□□□ -0.11
TTC28-207ENST00000490475 ANO8Q9HCE9 1232 aaPredicted RBP14.39□□□□□ -0.11
TTC28-207ENST00000490475 CASZ1Q86V15 1759 aa14.39□□□□□ -0.11
TTC28-207ENST00000490475 FYB1O15117 783 aa14.38□□□□□ -0.11
TTC28-207ENST00000490475 SLC27A3Q5K4L6 730 aa14.38□□□□□ -0.11
TTC28-207ENST00000490475 LTV1Q96GA3 475 aaPredicted RBP14.38□□□□□ -0.11
TTC28-207ENST00000490475 ACSBG1Q96GR2 724 aa14.38□□□□□ -0.11
TTC28-207ENST00000490475 BTAF1O14981 1849 aa14.38□□□□□ -0.11
TTC28-207ENST00000490475 ZCRB1Q8TBF4 217 aaKnown RBP14.36□□□□□ -0.11
TTC28-207ENST00000490475 DDX54Q8TDD1 881 aaKnown RBP14.36□□□□□ -0.11
TTC28-207ENST00000490475 MTFR1LQ9H019 292 aa14.36□□□□□ -0.11
TTC28-207ENST00000490475 KIF20BQ96Q89 1820 aa14.36□□□□□ -0.11
TTC28-207ENST00000490475 RAPGEF4Q8WZA2 1011 aa14.35□□□□□ -0.11
TTC28-207ENST00000490475 GGNBP2Q9H3C7 697 aa14.35□□□□□ -0.11
TTC28-207ENST00000490475 INSRP06213 1382 aa14.34□□□□□ -0.11
TTC28-207ENST00000490475 FLT4P35916 1363 aa14.34□□□□□ -0.11
TTC28-207ENST00000490475 SLC16A10Q8TF71 515 aa14.34□□□□□ -0.11
TTC28-207ENST00000490475 ZBTB7AO95365 584 aa14.33□□□□□ -0.12
TTC28-207ENST00000490475 TATP17735 454 aaPredicted RBP14.32□□□□□ -0.12
TTC28-207ENST00000490475 RRS1Q15050 365 aaKnown RBP14.32□□□□□ -0.12
TTC28-207ENST00000490475 PAPPAQ13219 1627 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms