RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 TOM1L2Q6ZVM7 507 aa24.38■■□□□ 1.49
SEC13-218ENST00000490283 ZRANB1Q9UGI0 708 aa24.37■■□□□ 1.49
SEC13-218ENST00000490283 CSB-PGBD3P0DP91 1061 aa24.36■■□□□ 1.49
SEC13-218ENST00000490283 ANKRD36BQ8N2N9 1353 aa24.35■■□□□ 1.49
SEC13-218ENST00000490283 NFAT5O94916 1531 aa24.35■■□□□ 1.49
SEC13-218ENST00000490283 WDR17Q8IZU2 1322 aa24.35■■□□□ 1.49
SEC13-218ENST00000490283 BAG6P46379 1132 aa24.34■■□□□ 1.49
SEC13-218ENST00000490283 FAM182BQ5T319 152 aa24.34■■□□□ 1.49
SEC13-218ENST00000490283 AXIN2Q9Y2T1 843 aa24.34■■□□□ 1.49
SEC13-218ENST00000490283 EP400Q96L91 3159 aa24.34■■□□□ 1.49
SEC13-218ENST00000490283 FAM196AQ6ZSG2 479 aa24.33■■□□□ 1.49
SEC13-218ENST00000490283 ABCC6O95255 1503 aa24.32■■□□□ 1.48
SEC13-218ENST00000490283 USP54Q70EL1 1684 aa24.31■■□□□ 1.48
SEC13-218ENST00000490283 DEFB132Q7Z7B7 95 aa24.31■■□□□ 1.48
SEC13-218ENST00000490283 COG3Q96JB2 828 aa24.31■■□□□ 1.48
SEC13-218ENST00000490283 COL18A1P39060 1754 aa24.3■■□□□ 1.48
SEC13-218ENST00000490283 OVOS2A0A0J9YW53 1432 aa24.29■■□□□ 1.48
SEC13-218ENST00000490283 OVOS2Q6IE36 1432 aa24.29■■□□□ 1.48
SEC13-218ENST00000490283 CDCA7Q9BWT1 371 aaPredicted RBP24.29■■□□□ 1.48
SEC13-218ENST00000490283 CARD10Q9BWT7 1032 aa24.28■■□□□ 1.48
SEC13-218ENST00000490283 C11orf95C9JLR9 678 aaPredicted RBP24.27■■□□□ 1.48
SEC13-218ENST00000490283 EIF4G2P78344 907 aaKnown RBP eCLIP24.26■■□□□ 1.47
SEC13-218ENST00000490283 DDB1Q16531 1140 aa24.26■■□□□ 1.47
SEC13-218ENST00000490283 CCDC7Q96M83 1385 aa24.25■■□□□ 1.47
SEC13-218ENST00000490283 RGPD1P0DJD0 1748 aa24.24■■□□□ 1.47
SEC13-218ENST00000490283 TRIM37O94972 964 aa24.23■■□□□ 1.47
SEC13-218ENST00000490283 ERBB3P21860 1342 aa24.23■■□□□ 1.47
SEC13-218ENST00000490283 PARP4Q9UKK3 1724 aaKnown RBP24.23■■□□□ 1.47
SEC13-218ENST00000490283 NLRP2Q9NX02 1062 aa24.22■■□□□ 1.47
SEC13-218ENST00000490283 ANKRD24Q8TF21 1146 aa24.21■■□□□ 1.47
SEC13-218ENST00000490283 POLR3GLQ9BT43 218 aa24.21■■□□□ 1.47
SEC13-218ENST00000490283 OVOS2A0A0G2JMS6 1433 aa24.2■■□□□ 1.46
SEC13-218ENST00000490283 EN1Q05925 392 aaPredicted RBP24.2■■□□□ 1.46
SEC13-218ENST00000490283 LTN1O94822 1766 aa24.19■■□□□ 1.46
SEC13-218ENST00000490283 RGPD5Q99666 1765 aa24.19■■□□□ 1.46
SEC13-218ENST00000490283 AMPHP49418 695 aa24.19■■□□□ 1.46
SEC13-218ENST00000490283 IP6K1Q92551 441 aa24.19■■□□□ 1.46
SEC13-218ENST00000490283 GGNBP2Q9H3C7 697 aa24.19■■□□□ 1.46
SEC13-218ENST00000490283 DISP2A7MBM2 1401 aa24.18■■□□□ 1.46
SEC13-218ENST00000490283 FYB1O15117 783 aa24.18■■□□□ 1.46
SEC13-218ENST00000490283 APBA3O96018 575 aa24.18■■□□□ 1.46
SEC13-218ENST00000490283 HSPA5P11021 654 aaKnown RBP24.18■■□□□ 1.46
SEC13-218ENST00000490283 EXOC5O00471 708 aa24.17■■□□□ 1.46
SEC13-218ENST00000490283 LRRC37A3O60309 1634 aa24.17■■□□□ 1.46
SEC13-218ENST00000490283 MAP3K19Q56UN5 1328 aa24.16■■□□□ 1.46
SEC13-218ENST00000490283 NSD3Q9BZ95 1437 aa24.15■■□□□ 1.46
SEC13-218ENST00000490283 LTV1Q96GA3 475 aaPredicted RBP24.14■■□□□ 1.45
SEC13-218ENST00000490283 TNS1Q9HBL0 1735 aaKnown RBP24.14■■□□□ 1.45
SEC13-218ENST00000490283 PARD3Q8TEW0 1356 aa24.14■■□□□ 1.45
SEC13-218ENST00000490283 WNK3Q9BYP7 1800 aa24.13■■□□□ 1.45
SEC13-218ENST00000490283 IL2RBP14784 551 aa24.13■■□□□ 1.45
SEC13-218ENST00000490283 HOXC9P31274 260 aa24.13■■□□□ 1.45
SEC13-218ENST00000490283 RTL1A6NKG5 1358 aa24.13■■□□□ 1.45
SEC13-218ENST00000490283 MYOM1P52179 1685 aa24.12■■□□□ 1.45
SEC13-218ENST00000490283 EZH2Q15910 746 aaKnown RBP24.12■■□□□ 1.45
SEC13-218ENST00000490283 CARD14Q9BXL6 1004 aa24.11■■□□□ 1.45
SEC13-218ENST00000490283 CGNL1Q0VF96 1302 aa24.1■■□□□ 1.45
SEC13-218ENST00000490283 TNS2Q63HR2 1409 aa24.1■■□□□ 1.45
SEC13-218ENST00000490283 FBLN1P23142 703 aa24.1■■□□□ 1.45
SEC13-218ENST00000490283 RRS1Q15050 365 aaKnown RBP24.1■■□□□ 1.45
SEC13-218ENST00000490283 MARCH10Q8NA82 808 aaPredicted RBP24.1■■□□□ 1.45
SEC13-218ENST00000490283 CAMKK2Q96RR4 588 aa24.1■■□□□ 1.45
SEC13-218ENST00000490283 SMG6Q86US8 1419 aaKnown RBP24.09■■□□□ 1.45
SEC13-218ENST00000490283 KIF20BQ96Q89 1820 aa24.08■■□□□ 1.45
SEC13-218ENST00000490283 BCL9O00512 1426 aa24.07■■□□□ 1.44
SEC13-218ENST00000490283 PEAK1Q9H792 1746 aa24.07■■□□□ 1.44
SEC13-218ENST00000490283 FAM208AQ9UK61 1670 aaKnown RBP24.06■■□□□ 1.44
SEC13-218ENST00000490283 BCL11BQ9C0K0 894 aaPredicted RBP24.06■■□□□ 1.44
SEC13-218ENST00000490283 KIF24Q5T7B8 1368 aa24.04■■□□□ 1.44
SEC13-218ENST00000490283 PSDA5PKW4 1024 aaPredicted RBP24.04■■□□□ 1.44
SEC13-218ENST00000490283 FLT4P35916 1363 aa24.03■■□□□ 1.44
SEC13-218ENST00000490283 NBPF14Q5TI25 921 aa24.02■■□□□ 1.44
SEC13-218ENST00000490283 INSRP06213 1382 aa24.01■■□□□ 1.43
SEC13-218ENST00000490283 PLSCR1O15162 318 aa24■■□□□ 1.43
SEC13-218ENST00000490283 R3HDM1Q15032 1099 aaKnown RBP24■■□□□ 1.43
SEC13-218ENST00000490283 PANK3Q9H999 370 aa23.99■■□□□ 1.43
SEC13-218ENST00000490283 PPM1GO15355 546 aaPredicted RBP23.98■■□□□ 1.43
SEC13-218ENST00000490283 HSP90AB2PQ58FF8 381 aa23.98■■□□□ 1.43
SEC13-218ENST00000490283 DDX54Q8TDD1 881 aaKnown RBP23.97■■□□□ 1.43
SEC13-218ENST00000490283 RAPGEF4Q8WZA2 1011 aa23.97■■□□□ 1.43
SEC13-218ENST00000490283 EMILIN1Q9Y6C2 1016 aa23.97■■□□□ 1.43
SEC13-218ENST00000490283 SBF2Q86WG5 1849 aa23.96■■□□□ 1.43
SEC13-218ENST00000490283 NBPF6Q5VWK0 638 aa23.95■■□□□ 1.42
SEC13-218ENST00000490283 ACSBG1Q96GR2 724 aa23.95■■□□□ 1.42
SEC13-218ENST00000490283 NBPF4Q96M43 638 aa23.95■■□□□ 1.42
SEC13-218ENST00000490283 RREB1Q92766 1687 aa23.95■■□□□ 1.42
SEC13-218ENST00000490283 NSD2O96028 1365 aa23.94■■□□□ 1.42
SEC13-218ENST00000490283 PTF1AQ7RTS3 328 aa23.94■■□□□ 1.42
SEC13-218ENST00000490283 TATP17735 454 aaPredicted RBP23.93■■□□□ 1.42
SEC13-218ENST00000490283 USHBP1Q8N6Y0 703 aa23.93■■□□□ 1.42
SEC13-218ENST00000490283 ZCRB1Q8TBF4 217 aaKnown RBP23.93■■□□□ 1.42
SEC13-218ENST00000490283 KNSTRNQ9Y448 316 aa23.93■■□□□ 1.42
SEC13-218ENST00000490283 RGPD3A6NKT7 1758 aaPredicted RBP23.93■■□□□ 1.42
SEC13-218ENST00000490283 RGPD4Q7Z3J3 1758 aa23.93■■□□□ 1.42
SEC13-218ENST00000490283 KCNQ2O43526 872 aa23.92■■□□□ 1.42
SEC13-218ENST00000490283 TNNT2P45379 298 aaPredicted RBP23.92■■□□□ 1.42
SEC13-218ENST00000490283 NUP188Q5SRE5 1749 aa23.91■■□□□ 1.42
SEC13-218ENST00000490283 MEGF6O75095 1541 aa23.9■■□□□ 1.42
SEC13-218ENST00000490283 WASHC2AQ641Q2 1341 aa23.9■■□□□ 1.42
SEC13-218ENST00000490283 NHSQ6T4R5 1651 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms