RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CNKSR2Q8WXI2 1034 aa10.48□□□□□ -0.73
LSAMP-205ENST00000490035 ABCC11Q96J66 1382 aa10.48□□□□□ -0.73
LSAMP-205ENST00000490035 LAMC3Q9Y6N6 1575 aa10.48□□□□□ -0.73
LSAMP-205ENST00000490035 THEMISQ8N1K5 641 aaPredicted RBP10.48□□□□□ -0.73
LSAMP-205ENST00000490035 SURF6O75683 361 aaKnown RBP10.47□□□□□ -0.73
LSAMP-205ENST00000490035 MEX3CQ5U5Q3 659 aaKnown RBP10.47□□□□□ -0.73
LSAMP-205ENST00000490035 PPFIBP1Q86W92 1011 aa10.47□□□□□ -0.73
LSAMP-205ENST00000490035 KRI1Q8N9T8 703 aaKnown RBP10.47□□□□□ -0.73
LSAMP-205ENST00000490035 FOXD4L6Q3SYB3 417 aaPredicted RBP10.47□□□□□ -0.73
LSAMP-205ENST00000490035 FOXD4L3Q6VB84 417 aaPredicted RBP10.47□□□□□ -0.73
LSAMP-205ENST00000490035 TWISTNBQ3B726 338 aaPredicted RBP10.47□□□□□ -0.73
LSAMP-205ENST00000490035 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.47□□□□□ -0.73
LSAMP-205ENST00000490035 TATP17735 454 aaPredicted RBP10.47□□□□□ -0.73
LSAMP-205ENST00000490035 PDE4CQ08493 712 aa10.47□□□□□ -0.73
LSAMP-205ENST00000490035 PPP2R1AP30153 589 aa10.47□□□□□ -0.73
LSAMP-205ENST00000490035 CCDC27Q2M243 656 aa10.47□□□□□ -0.73
LSAMP-205ENST00000490035 CCDC57Q2TAC2 916 aa10.47□□□□□ -0.73
LSAMP-205ENST00000490035 TCP11L2Q8N4U5 519 aa10.47□□□□□ -0.73
LSAMP-205ENST00000490035 SPG7Q9UQ90 795 aa10.47□□□□□ -0.73
LSAMP-205ENST00000490035 K7ELQ4 463 aaPredicted RBP10.47□□□□□ -0.73
LSAMP-205ENST00000490035 RAB11FIP3O75154 756 aa10.47□□□□□ -0.73
LSAMP-205ENST00000490035 NEK4P51957 841 aa10.47□□□□□ -0.73
LSAMP-205ENST00000490035 BMP2KQ9NSY1 1161 aaPredicted RBP10.47□□□□□ -0.73
LSAMP-205ENST00000490035 STK38Q15208 465 aa10.46□□□□□ -0.73
LSAMP-205ENST00000490035 PDILTQ8N807 584 aa10.46□□□□□ -0.73
LSAMP-205ENST00000490035 RAD21O60216 631 aa10.46□□□□□ -0.73
LSAMP-205ENST00000490035 FAM135AQ9P2D6 1515 aa10.46□□□□□ -0.73
LSAMP-205ENST00000490035 NLRP6P59044 892 aa10.46□□□□□ -0.74
LSAMP-205ENST00000490035 ATF7IPQ6VMQ6 1270 aa10.46□□□□□ -0.74
LSAMP-205ENST00000490035 GBP3Q9H0R5 595 aa10.46□□□□□ -0.74
LSAMP-205ENST00000490035 ABTB2Q8N961 1025 aa10.46□□□□□ -0.74
LSAMP-205ENST00000490035 PPP6R1Q9UPN7 881 aa10.46□□□□□ -0.74
LSAMP-205ENST00000490035 TTC39AQ5SRH9 613 aa10.45□□□□□ -0.74
LSAMP-205ENST00000490035 RPAP2Q8IXW5 612 aaPredicted RBP10.45□□□□□ -0.74
LSAMP-205ENST00000490035 SYTL4Q96C24 671 aaPredicted RBP10.45□□□□□ -0.74
LSAMP-205ENST00000490035 RAD54L2Q9Y4B4 1467 aa10.45□□□□□ -0.74
LSAMP-205ENST00000490035 MSH5O43196 834 aa10.45□□□□□ -0.74
LSAMP-205ENST00000490035 FCHSD2O94868 740 aa10.45□□□□□ -0.74
LSAMP-205ENST00000490035 MVPQ14764 893 aaKnown RBP10.44□□□□□ -0.74
LSAMP-205ENST00000490035 TNMDQ9H2S6 317 aa10.44□□□□□ -0.74
LSAMP-205ENST00000490035 ADAMTS8Q9UP79 889 aa10.44□□□□□ -0.74
LSAMP-205ENST00000490035 CCDC69A6NI79 296 aa10.44□□□□□ -0.74
LSAMP-205ENST00000490035 KIAA0754O94854 1291 aa10.44□□□□□ -0.74
LSAMP-205ENST00000490035 HMOX1P09601 288 aa10.44□□□□□ -0.74
LSAMP-205ENST00000490035 SEPT7Q16181 437 aaKnown RBP10.44□□□□□ -0.74
LSAMP-205ENST00000490035 VSIG10Q8N0Z9 540 aa10.44□□□□□ -0.74
LSAMP-205ENST00000490035 DEF6Q9H4E7 631 aa10.44□□□□□ -0.74
LSAMP-205ENST00000490035 HMGB1P09429 215 aaKnown RBP10.44□□□□□ -0.74
LSAMP-205ENST00000490035 ZNF397Q8NF99 534 aaPredicted RBP10.44□□□□□ -0.74
LSAMP-205ENST00000490035 ZFYVE27Q5T4F4 411 aa10.44□□□□□ -0.74
LSAMP-205ENST00000490035 INCENPQ9NQS7 918 aa10.44□□□□□ -0.74
LSAMP-205ENST00000490035 PANK1Q8TE04 598 aa10.44□□□□□ -0.74
LSAMP-205ENST00000490035 DCAF8L1A6NGE4 600 aa10.43□□□□□ -0.74
LSAMP-205ENST00000490035 FGFR1OPO95684 399 aaKnown RBP10.43□□□□□ -0.74
LSAMP-205ENST00000490035 CAVIN2O95810 425 aa10.43□□□□□ -0.74
LSAMP-205ENST00000490035 SERPINC1P01008 464 aa10.43□□□□□ -0.74
LSAMP-205ENST00000490035 EZRP15311 586 aaKnown RBP10.43□□□□□ -0.74
LSAMP-205ENST00000490035 PRXQ9BXM0 1461 aa10.43□□□□□ -0.74
LSAMP-205ENST00000490035 PHAXQ9H814 394 aaKnown RBP10.43□□□□□ -0.74
LSAMP-205ENST00000490035 NLRP2Q9NX02 1062 aa10.43□□□□□ -0.74
LSAMP-205ENST00000490035 CCDC196A0A1B0GTZ2 297 aa10.43□□□□□ -0.74
LSAMP-205ENST00000490035 PYM1Q9BRP8 204 aaKnown RBP10.43□□□□□ -0.74
LSAMP-205ENST00000490035 NSD2O96028 1365 aa10.43□□□□□ -0.74
LSAMP-205ENST00000490035 FAM69CQ0P6D2 419 aa10.43□□□□□ -0.74
LSAMP-205ENST00000490035 HDGFL1Q5TGJ6 251 aa10.43□□□□□ -0.74
LSAMP-205ENST00000490035 CNNM1Q9NRU3 951 aa10.43□□□□□ -0.74
LSAMP-205ENST00000490035 CTAGE5O15320 804 aa10.43□□□□□ -0.74
LSAMP-205ENST00000490035 THOC2Q8NI27 1593 aaKnown RBP10.43□□□□□ -0.74
LSAMP-205ENST00000490035 IKQ13123 557 aaPredicted RBP10.42□□□□□ -0.74
LSAMP-205ENST00000490035 ALDH1L2Q3SY69 923 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 CCDC181Q5TID7 509 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 KRT18P05783 430 aaKnown RBP10.42□□□□□ -0.74
LSAMP-205ENST00000490035 BLOC1S2Q6QNY1 142 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 AKNAQ7Z591 1439 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 GBP2P32456 591 aaPredicted RBP10.42□□□□□ -0.74
LSAMP-205ENST00000490035 CETN2P41208 172 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 MAP9Q49MG5 647 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 SOGA3Q5TF21 947 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 CEP57L1Q8IYX8 460 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 AKAP2Q9Y2D5 859 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 RTEL1-TNFRSF6BF6WH68 1400 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 CTTNBP2Q8WZ74 1663 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 PPP1R12BO60237 982 aaPredicted RBP10.42□□□□□ -0.74
LSAMP-205ENST00000490035 SLC4A3P48751 1232 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 KCNH5Q8NCM2 988 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 ARAP1Q96P48 1450 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 CHD1LQ86WJ1 897 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 PRKAR2BP31323 418 aa10.42□□□□□ -0.74
LSAMP-205ENST00000490035 IMMTQ16891 758 aaKnown RBP10.42□□□□□ -0.74
LSAMP-205ENST00000490035 NKTRP30414 1462 aaKnown RBP10.41□□□□□ -0.74
LSAMP-205ENST00000490035 POTEJP0CG39 1038 aa10.41□□□□□ -0.74
LSAMP-205ENST00000490035 CCDC112Q8NEF3 446 aa10.41□□□□□ -0.74
LSAMP-205ENST00000490035 TOPBP1Q92547 1522 aa10.41□□□□□ -0.74
LSAMP-205ENST00000490035 FBXW7Q969H0 707 aa10.41□□□□□ -0.74
LSAMP-205ENST00000490035 NECTIN2Q92692 538 aa10.41□□□□□ -0.74
LSAMP-205ENST00000490035 EIF2AK4Q9P2K8 1649 aaKnown RBP10.41□□□□□ -0.74
LSAMP-205ENST00000490035 KIF21AQ7Z4S6 1674 aa10.41□□□□□ -0.74
LSAMP-205ENST00000490035 BACH2Q9BYV9 841 aa10.41□□□□□ -0.74
LSAMP-205ENST00000490035 U3KPZ7 1027 aaPredicted RBP10.41□□□□□ -0.74
LSAMP-205ENST00000490035 PDZRN3Q9UPQ7 1066 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms