RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 PLCH1Q4KWH8 1693 aa17.94■□□□□ 0.46
TRAIP-210ENST00000489948 SOX12O15370 315 aa17.94■□□□□ 0.46
TRAIP-210ENST00000489948 HOXC9P31274 260 aa17.94■□□□□ 0.46
TRAIP-210ENST00000489948 HSPA1LP34931 641 aa17.94■□□□□ 0.46
TRAIP-210ENST00000489948 CABLES1Q8TDN4 633 aa17.94■□□□□ 0.46
TRAIP-210ENST00000489948 NWD2Q9ULI1 1742 aa17.94■□□□□ 0.46
TRAIP-210ENST00000489948 IP6K1Q92551 441 aa17.93■□□□□ 0.46
TRAIP-210ENST00000489948 AMPHP49418 695 aa17.92■□□□□ 0.46
TRAIP-210ENST00000489948 PNISRQ8TF01 805 aaKnown RBP17.92■□□□□ 0.46
TRAIP-210ENST00000489948 NRAPQ86VF7 1730 aa17.92■□□□□ 0.46
TRAIP-210ENST00000489948 NCAPD2Q15021 1401 aa17.9■□□□□ 0.46
TRAIP-210ENST00000489948 DIAPH1O60610 1272 aaKnown RBP17.9■□□□□ 0.46
TRAIP-210ENST00000489948 HAP1P54257 671 aaPredicted RBP17.9■□□□□ 0.46
TRAIP-210ENST00000489948 LRP6O75581 1613 aa17.9■□□□□ 0.46
TRAIP-210ENST00000489948 COL5A2P05997 1499 aaPredicted RBP17.89■□□□□ 0.45
TRAIP-210ENST00000489948 PPM1GO15355 546 aaPredicted RBP17.89■□□□□ 0.45
TRAIP-210ENST00000489948 IL13P35225 146 aa17.89■□□□□ 0.45
TRAIP-210ENST00000489948 ZC3H6P61129 1189 aaKnown RBP17.89■□□□□ 0.45
TRAIP-210ENST00000489948 HSP90AB2PQ58FF8 381 aa17.89■□□□□ 0.45
TRAIP-210ENST00000489948 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.89■□□□□ 0.45
TRAIP-210ENST00000489948 EIF4A2Q14240 407 aaKnown RBP17.88■□□□□ 0.45
TRAIP-210ENST00000489948 PRDM11Q9NQV5 511 aa17.88■□□□□ 0.45
TRAIP-210ENST00000489948 ERBB3P21860 1342 aa17.88■□□□□ 0.45
TRAIP-210ENST00000489948 NUDCQ9Y266 331 aa17.87■□□□□ 0.45
TRAIP-210ENST00000489948 WDR43Q15061 677 aaKnown RBP eCLIP17.86■□□□□ 0.45
TRAIP-210ENST00000489948 IGSF1Q8N6C5 1336 aa17.86■□□□□ 0.45
TRAIP-210ENST00000489948 KDRP35968 1356 aa17.86■□□□□ 0.45
TRAIP-210ENST00000489948 SLIT2O94813 1529 aa17.86■□□□□ 0.45
TRAIP-210ENST00000489948 RGPD2P0DJD1 1756 aa17.86■□□□□ 0.45
TRAIP-210ENST00000489948 PLEKHG5O94827 1062 aa17.85■□□□□ 0.45
TRAIP-210ENST00000489948 PLEKHG2Q9H7P9 1386 aa17.84■□□□□ 0.45
TRAIP-210ENST00000489948 AXIN2Q9Y2T1 843 aa17.84■□□□□ 0.45
TRAIP-210ENST00000489948 FAM83GA6ND36 823 aa17.82■□□□□ 0.44
TRAIP-210ENST00000489948 CHRNA2Q15822 529 aa17.82■□□□□ 0.44
TRAIP-210ENST00000489948 ANKRD24Q8TF21 1146 aa17.82■□□□□ 0.44
TRAIP-210ENST00000489948 WNK3Q9BYP7 1800 aa17.82■□□□□ 0.44
TRAIP-210ENST00000489948 WDR17Q8IZU2 1322 aa17.81■□□□□ 0.44
TRAIP-210ENST00000489948 ZBTB7CA1YPR0 619 aa17.81■□□□□ 0.44
TRAIP-210ENST00000489948 ADAMTS8Q9UP79 889 aa17.8■□□□□ 0.44
TRAIP-210ENST00000489948 PARP4Q9UKK3 1724 aaKnown RBP17.79■□□□□ 0.44
TRAIP-210ENST00000489948 U2SURPO15042 1029 aaKnown RBP17.79■□□□□ 0.44
TRAIP-210ENST00000489948 U2AF1L5P0DN76 240 aaPredicted RBP17.79■□□□□ 0.44
TRAIP-210ENST00000489948 U2AF1Q01081 240 aaKnown RBP eCLIP17.79■□□□□ 0.44
TRAIP-210ENST00000489948 FAM9BQ8IZU0 186 aa17.79■□□□□ 0.44
TRAIP-210ENST00000489948 CRB1P82279 1406 aa17.79■□□□□ 0.44
TRAIP-210ENST00000489948 NUTM2BA6NNL0 878 aaPredicted RBP17.78■□□□□ 0.44
TRAIP-210ENST00000489948 NUTM2EB1AL46 878 aaPredicted RBP17.78■□□□□ 0.44
TRAIP-210ENST00000489948 FCHSD2O94868 740 aa17.78■□□□□ 0.44
TRAIP-210ENST00000489948 ADAMTS2O95450 1211 aa17.78■□□□□ 0.44
TRAIP-210ENST00000489948 NUTM2AQ8IVF1 878 aaPredicted RBP17.78■□□□□ 0.44
TRAIP-210ENST00000489948 EYA1Q99502 592 aa17.78■□□□□ 0.44
TRAIP-210ENST00000489948 RSPH6AQ9H0K4 717 aa17.78■□□□□ 0.44
TRAIP-210ENST00000489948 PNNQ9H307 717 aaKnown RBP17.77■□□□□ 0.44
TRAIP-210ENST00000489948 BTG4Q9NY30 223 aa17.77■□□□□ 0.44
TRAIP-210ENST00000489948 PKD1L3Q7Z443 1732 aa17.76■□□□□ 0.43
TRAIP-210ENST00000489948 FNBP4Q8N3X1 1017 aaPredicted RBP17.76■□□□□ 0.43
TRAIP-210ENST00000489948 BCL9LQ86UU0 1499 aa17.75■□□□□ 0.43
TRAIP-210ENST00000489948 NBPF6Q5VWK0 638 aa17.75■□□□□ 0.43
TRAIP-210ENST00000489948 LTV1Q96GA3 475 aaPredicted RBP17.75■□□□□ 0.43
TRAIP-210ENST00000489948 NBPF4Q96M43 638 aa17.75■□□□□ 0.43
TRAIP-210ENST00000489948 PLEKHF1Q96S99 279 aa17.75■□□□□ 0.43
TRAIP-210ENST00000489948 SULT6B1Q6IMI4 303 aa17.74■□□□□ 0.43
TRAIP-210ENST00000489948 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
TRAIP-210ENST00000489948 AEBP1Q8IUX7 1158 aa17.73■□□□□ 0.43
TRAIP-210ENST00000489948 RUNDC1Q96C34 613 aa17.73■□□□□ 0.43
TRAIP-210ENST00000489948 CARD10Q9BWT7 1032 aa17.73■□□□□ 0.43
TRAIP-210ENST00000489948 CSB-PGBD3P0DP91 1061 aa17.72■□□□□ 0.43
TRAIP-210ENST00000489948 C8orf37Q96NL8 207 aa17.72■□□□□ 0.43
TRAIP-210ENST00000489948 MEGF6O75095 1541 aa17.72■□□□□ 0.43
TRAIP-210ENST00000489948 DISP2A7MBM2 1401 aa17.72■□□□□ 0.43
TRAIP-210ENST00000489948 HMOX1P09601 288 aa17.71■□□□□ 0.43
TRAIP-210ENST00000489948 PRKAR2BP31323 418 aa17.71■□□□□ 0.43
TRAIP-210ENST00000489948 LARP1Q6PKG0 1096 aaKnown RBP17.71■□□□□ 0.43
TRAIP-210ENST00000489948 UNC5CLQ8IV45 518 aa17.71■□□□□ 0.43
TRAIP-210ENST00000489948 NGEFQ8N5V2 710 aa17.71■□□□□ 0.43
TRAIP-210ENST00000489948 OVOS2A0A0G2JMS6 1433 aa17.71■□□□□ 0.43
TRAIP-210ENST00000489948 MAPK8IP3Q9UPT6 1336 aa17.71■□□□□ 0.42
TRAIP-210ENST00000489948 DLG5Q8TDM6 1919 aa17.7■□□□□ 0.42
TRAIP-210ENST00000489948 MEX3CQ5U5Q3 659 aaKnown RBP17.7■□□□□ 0.42
TRAIP-210ENST00000489948 TOM1L2Q6ZVM7 507 aa17.7■□□□□ 0.42
TRAIP-210ENST00000489948 NLRP2Q9NX02 1062 aa17.7■□□□□ 0.42
TRAIP-210ENST00000489948 SHANK3Q9BYB0 1731 aa17.69■□□□□ 0.42
TRAIP-210ENST00000489948 EVA1CP58658 441 aa17.69■□□□□ 0.42
TRAIP-210ENST00000489948 NGLY1Q96IV0 654 aa17.69■□□□□ 0.42
TRAIP-210ENST00000489948 STRN4Q9NRL3 753 aa17.69■□□□□ 0.42
TRAIP-210ENST00000489948 ATRNO75882 1429 aa17.68■□□□□ 0.42
TRAIP-210ENST00000489948 NEFMP07197 916 aa17.68■□□□□ 0.42
TRAIP-210ENST00000489948 CCDC146Q8IYE0 955 aa17.68■□□□□ 0.42
TRAIP-210ENST00000489948 USHBP1Q8N6Y0 703 aa17.68■□□□□ 0.42
TRAIP-210ENST00000489948 SPATA31A5Q5VU36 1347 aa17.68■□□□□ 0.42
TRAIP-210ENST00000489948 SPATA31A7Q8IWB4 1347 aa17.68■□□□□ 0.42
TRAIP-210ENST00000489948 VPS72Q15906 364 aa17.67■□□□□ 0.42
TRAIP-210ENST00000489948 THRAP3Q9Y2W1 955 aaKnown RBP17.67■□□□□ 0.42
TRAIP-210ENST00000489948 LRRC37A3O60309 1634 aa17.67■□□□□ 0.42
TRAIP-210ENST00000489948 ADAMTS7Q9UKP4 1686 aa17.67■□□□□ 0.42
TRAIP-210ENST00000489948 THSD7AQ9UPZ6 1657 aa17.67■□□□□ 0.42
TRAIP-210ENST00000489948 AFF2P51816 1311 aa17.67■□□□□ 0.42
TRAIP-210ENST00000489948 SPATA31A1Q5TZJ5 1347 aa17.67■□□□□ 0.42
TRAIP-210ENST00000489948 GLI3P10071 1580 aa17.66■□□□□ 0.42
TRAIP-210ENST00000489948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms