RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 WNK3Q9BYP7 1800 aa27.55■■■□□ 2
TNFRSF1B-202ENST00000489921 TESK2Q96S53 571 aa27.55■■■□□ 2
TNFRSF1B-202ENST00000489921 USP31Q70CQ4 1352 aa27.55■■■□□ 2
TNFRSF1B-202ENST00000489921 LRRC37A3O60309 1634 aa27.54■■■□□ 2
TNFRSF1B-202ENST00000489921 WDR17Q8IZU2 1322 aa27.54■■■□□ 2
TNFRSF1B-202ENST00000489921 PSDA5PKW4 1024 aaPredicted RBP27.53■■■□□ 2
TNFRSF1B-202ENST00000489921 SOX12O15370 315 aa27.53■■■□□ 2
TNFRSF1B-202ENST00000489921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.53■■■□□ 2
TNFRSF1B-202ENST00000489921 PUS7Q96PZ0 661 aaKnown RBP27.53■■■□□ 2
TNFRSF1B-202ENST00000489921 TOM1L2Q6ZVM7 507 aa27.52■■■□□ 2
TNFRSF1B-202ENST00000489921 NME9Q86XW9 330 aa27.51■■□□□ 1.99
TNFRSF1B-202ENST00000489921 TMC1Q8TDI8 760 aa27.51■■□□□ 1.99
TNFRSF1B-202ENST00000489921 LRP5O75197 1615 aa27.5■■□□□ 1.99
TNFRSF1B-202ENST00000489921 ST20-MTHFSA0A0A6YYL1 179 aa27.5■■□□□ 1.99
TNFRSF1B-202ENST00000489921 APBA3O96018 575 aa27.5■■□□□ 1.99
TNFRSF1B-202ENST00000489921 SBF2Q86WG5 1849 aa27.5■■□□□ 1.99
TNFRSF1B-202ENST00000489921 RREB1Q92766 1687 aa27.49■■□□□ 1.99
TNFRSF1B-202ENST00000489921 A0A1W2PP64 1363 aa27.48■■□□□ 1.99
TNFRSF1B-202ENST00000489921 ABCC6O95255 1503 aa27.48■■□□□ 1.99
TNFRSF1B-202ENST00000489921 EDC4Q6P2E9 1401 aaKnown RBP27.47■■□□□ 1.99
TNFRSF1B-202ENST00000489921 LTN1O94822 1766 aa27.46■■□□□ 1.99
TNFRSF1B-202ENST00000489921 HDGFL2Q7Z4V5 671 aaPredicted RBP27.46■■□□□ 1.99
TNFRSF1B-202ENST00000489921 CARD10Q9BWT7 1032 aa27.46■■□□□ 1.99
TNFRSF1B-202ENST00000489921 PARD3Q8TEW0 1356 aa27.45■■□□□ 1.98
TNFRSF1B-202ENST00000489921 NUP188Q5SRE5 1749 aa27.44■■□□□ 1.98
TNFRSF1B-202ENST00000489921 R3HDM1Q15032 1099 aaKnown RBP27.44■■□□□ 1.98
TNFRSF1B-202ENST00000489921 DDB1Q16531 1140 aa27.44■■□□□ 1.98
TNFRSF1B-202ENST00000489921 OVOS2A0A0G2JMS6 1433 aa27.43■■□□□ 1.98
TNFRSF1B-202ENST00000489921 OVOS2A0A0J9YW53 1432 aa27.43■■□□□ 1.98
TNFRSF1B-202ENST00000489921 OVOS2Q6IE36 1432 aa27.43■■□□□ 1.98
TNFRSF1B-202ENST00000489921 TERF2IPQ9NYB0 399 aa27.43■■□□□ 1.98
TNFRSF1B-202ENST00000489921 MARCH10Q8NA82 808 aaPredicted RBP27.42■■□□□ 1.98
TNFRSF1B-202ENST00000489921 C11orf95C9JLR9 678 aaPredicted RBP27.4■■□□□ 1.98
TNFRSF1B-202ENST00000489921 CSB-PGBD3P0DP91 1061 aa27.4■■□□□ 1.98
TNFRSF1B-202ENST00000489921 PTF1AQ7RTS3 328 aa27.4■■□□□ 1.98
TNFRSF1B-202ENST00000489921 CDCA7Q9BWT1 371 aaPredicted RBP27.39■■□□□ 1.98
TNFRSF1B-202ENST00000489921 BCL9O00512 1426 aa27.38■■□□□ 1.97
TNFRSF1B-202ENST00000489921 ERBB3P21860 1342 aa27.38■■□□□ 1.97
TNFRSF1B-202ENST00000489921 NINLQ9Y2I6 1382 aa27.37■■□□□ 1.97
TNFRSF1B-202ENST00000489921 CCDC7Q96M83 1385 aa27.36■■□□□ 1.97
TNFRSF1B-202ENST00000489921 RGPD3A6NKT7 1758 aaPredicted RBP27.36■■□□□ 1.97
TNFRSF1B-202ENST00000489921 RGPD4Q7Z3J3 1758 aa27.36■■□□□ 1.97
TNFRSF1B-202ENST00000489921 SLC24A1O60721 1099 aa27.34■■□□□ 1.97
TNFRSF1B-202ENST00000489921 USP47Q96K76 1375 aa27.34■■□□□ 1.97
TNFRSF1B-202ENST00000489921 PLSCR1O15162 318 aa27.32■■□□□ 1.96
TNFRSF1B-202ENST00000489921 BCL11BQ9C0K0 894 aaPredicted RBP27.32■■□□□ 1.96
TNFRSF1B-202ENST00000489921 EXOC5O00471 708 aa27.31■■□□□ 1.96
TNFRSF1B-202ENST00000489921 ANKRD24Q8TF21 1146 aa27.3■■□□□ 1.96
TNFRSF1B-202ENST00000489921 ANKRD36BQ8N2N9 1353 aa27.3■■□□□ 1.96
TNFRSF1B-202ENST00000489921 TNS2Q63HR2 1409 aa27.3■■□□□ 1.96
TNFRSF1B-202ENST00000489921 NLRP2Q9NX02 1062 aa27.29■■□□□ 1.96
TNFRSF1B-202ENST00000489921 FBLN1P23142 703 aa27.28■■□□□ 1.96
TNFRSF1B-202ENST00000489921 PROM2Q8N271 834 aa27.28■■□□□ 1.96
TNFRSF1B-202ENST00000489921 IP6K1Q92551 441 aa27.28■■□□□ 1.96
TNFRSF1B-202ENST00000489921 TMF1P82094 1093 aa27.26■■□□□ 1.95
TNFRSF1B-202ENST00000489921 NBPF14Q5TI25 921 aa27.25■■□□□ 1.95
TNFRSF1B-202ENST00000489921 COG3Q96JB2 828 aa27.24■■□□□ 1.95
TNFRSF1B-202ENST00000489921 TIMELESSQ9UNS1 1208 aa27.24■■□□□ 1.95
TNFRSF1B-202ENST00000489921 MAP3K19Q56UN5 1328 aa27.23■■□□□ 1.95
TNFRSF1B-202ENST00000489921 IL2RBP14784 551 aa27.23■■□□□ 1.95
TNFRSF1B-202ENST00000489921 FAM208AQ9UK61 1670 aaKnown RBP27.23■■□□□ 1.95
TNFRSF1B-202ENST00000489921 NHSQ6T4R5 1651 aa27.22■■□□□ 1.95
TNFRSF1B-202ENST00000489921 FYB1O15117 783 aa27.22■■□□□ 1.95
TNFRSF1B-202ENST00000489921 KCNQ2O43526 872 aa27.22■■□□□ 1.95
TNFRSF1B-202ENST00000489921 RGPD2P0DJD1 1756 aa27.22■■□□□ 1.95
TNFRSF1B-202ENST00000489921 ANO8Q9HCE9 1232 aaPredicted RBP27.21■■□□□ 1.95
TNFRSF1B-202ENST00000489921 MYOM1P52179 1685 aa27.21■■□□□ 1.95
TNFRSF1B-202ENST00000489921 CLSPNQ9HAW4 1339 aa27.2■■□□□ 1.95
TNFRSF1B-202ENST00000489921 HOXC9P31274 260 aa27.2■■□□□ 1.94
TNFRSF1B-202ENST00000489921 LTV1Q96GA3 475 aaPredicted RBP27.18■■□□□ 1.94
TNFRSF1B-202ENST00000489921 PCGF6Q9BYE7 350 aa27.18■■□□□ 1.94
TNFRSF1B-202ENST00000489921 GGNBP2Q9H3C7 697 aa27.18■■□□□ 1.94
TNFRSF1B-202ENST00000489921 KIF20BQ96Q89 1820 aa27.16■■□□□ 1.94
TNFRSF1B-202ENST00000489921 ACSBG1Q96GR2 724 aa27.16■■□□□ 1.94
TNFRSF1B-202ENST00000489921 CASZ1Q86V15 1759 aa27.16■■□□□ 1.94
TNFRSF1B-202ENST00000489921 TXNRD1Q16881 649 aa27.15■■□□□ 1.94
TNFRSF1B-202ENST00000489921 CARD14Q9BXL6 1004 aa27.15■■□□□ 1.94
TNFRSF1B-202ENST00000489921 RRS1Q15050 365 aaKnown RBP27.14■■□□□ 1.94
TNFRSF1B-202ENST00000489921 BTAF1O14981 1849 aa27.13■■□□□ 1.93
TNFRSF1B-202ENST00000489921 AMPHP49418 695 aa27.13■■□□□ 1.93
TNFRSF1B-202ENST00000489921 CDCA8Q53HL2 280 aa27.13■■□□□ 1.93
TNFRSF1B-202ENST00000489921 SHANK3Q9BYB0 1731 aa27.13■■□□□ 1.93
TNFRSF1B-202ENST00000489921 PDGFDQ9GZP0 370 aaPredicted RBP27.12■■□□□ 1.93
TNFRSF1B-202ENST00000489921 RTL1A6NKG5 1358 aa27.11■■□□□ 1.93
TNFRSF1B-202ENST00000489921 KAT6BQ8WYB5 2073 aa27.1■■□□□ 1.93
TNFRSF1B-202ENST00000489921 NBPF6Q5VWK0 638 aa27.08■■□□□ 1.93
TNFRSF1B-202ENST00000489921 NBPF4Q96M43 638 aa27.08■■□□□ 1.93
TNFRSF1B-202ENST00000489921 SPON1Q9HCB6 807 aa27.07■■□□□ 1.92
TNFRSF1B-202ENST00000489921 MEGF6O75095 1541 aa27.06■■□□□ 1.92
TNFRSF1B-202ENST00000489921 PAPPAQ13219 1627 aa27.06■■□□□ 1.92
TNFRSF1B-202ENST00000489921 DDX54Q8TDD1 881 aaKnown RBP27.06■■□□□ 1.92
TNFRSF1B-202ENST00000489921 NSD3Q9BZ95 1437 aa27.05■■□□□ 1.92
TNFRSF1B-202ENST00000489921 SLC15A2Q16348 729 aa27.04■■□□□ 1.92
TNFRSF1B-202ENST00000489921 HSP90AB2PQ58FF8 381 aa27.04■■□□□ 1.92
TNFRSF1B-202ENST00000489921 INSRP06213 1382 aa27.02■■□□□ 1.92
TNFRSF1B-202ENST00000489921 DOT1LQ8TEK3 1739 aa27.02■■□□□ 1.92
TNFRSF1B-202ENST00000489921 USHBP1Q8N6Y0 703 aa27.01■■□□□ 1.91
TNFRSF1B-202ENST00000489921 ZCRB1Q8TBF4 217 aaKnown RBP27.01■■□□□ 1.91
TNFRSF1B-202ENST00000489921 LRRC4BQ9NT99 713 aa27.01■■□□□ 1.91
TNFRSF1B-202ENST00000489921 STK32BQ9NY57 414 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms