RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 RGPD3A6NKT7 1758 aaPredicted RBP21.57■■□□□ 1.04
FAM3D-204ENST00000489857 RGPD4Q7Z3J3 1758 aa21.57■■□□□ 1.04
FAM3D-204ENST00000489857 PLSCR1O15162 318 aa21.57■■□□□ 1.04
FAM3D-204ENST00000489857 MARCH10Q8NA82 808 aaPredicted RBP21.57■■□□□ 1.04
FAM3D-204ENST00000489857 ZNF692Q9BU19 519 aaPredicted RBP21.57■■□□□ 1.04
FAM3D-204ENST00000489857 SPON1Q9HCB6 807 aa21.57■■□□□ 1.04
FAM3D-204ENST00000489857 ANO8Q9HCE9 1232 aaPredicted RBP21.57■■□□□ 1.04
FAM3D-204ENST00000489857 SBF2Q86WG5 1849 aa21.57■■□□□ 1.04
FAM3D-204ENST00000489857 SOX12O15370 315 aa21.56■■□□□ 1.04
FAM3D-204ENST00000489857 KCNQ2O43526 872 aa21.56■■□□□ 1.04
FAM3D-204ENST00000489857 BCL11BQ9C0K0 894 aaPredicted RBP21.56■■□□□ 1.04
FAM3D-204ENST00000489857 WNK3Q9BYP7 1800 aa21.56■■□□□ 1.04
FAM3D-204ENST00000489857 ROCK2O75116 1388 aaKnown RBP21.56■■□□□ 1.04
FAM3D-204ENST00000489857 KCNH5Q8NCM2 988 aa21.55■■□□□ 1.04
FAM3D-204ENST00000489857 TTC21AQ8NDW8 1320 aa21.55■■□□□ 1.04
FAM3D-204ENST00000489857 AKAP12Q02952 1782 aa21.54■■□□□ 1.04
FAM3D-204ENST00000489857 CDCA7Q9BWT1 371 aaPredicted RBP21.54■■□□□ 1.04
FAM3D-204ENST00000489857 CARD10Q9BWT7 1032 aa21.54■■□□□ 1.04
FAM3D-204ENST00000489857 NFAT5O94916 1531 aa21.54■■□□□ 1.04
FAM3D-204ENST00000489857 BCL9O00512 1426 aa21.54■■□□□ 1.04
FAM3D-204ENST00000489857 PROM2Q8N271 834 aa21.53■■□□□ 1.04
FAM3D-204ENST00000489857 PPP1R1BQ9UD71 204 aaPredicted RBP21.53■■□□□ 1.04
FAM3D-204ENST00000489857 CSB-PGBD3P0DP91 1061 aa21.52■■□□□ 1.04
FAM3D-204ENST00000489857 KTN1Q86UP2 1357 aaKnown RBP21.51■■□□□ 1.03
FAM3D-204ENST00000489857 NEUROD1Q13562 356 aa21.51■■□□□ 1.03
FAM3D-204ENST00000489857 RGPD5Q99666 1765 aa21.51■■□□□ 1.03
FAM3D-204ENST00000489857 NINLQ9Y2I6 1382 aa21.49■■□□□ 1.03
FAM3D-204ENST00000489857 CASZ1Q86V15 1759 aa21.49■■□□□ 1.03
FAM3D-204ENST00000489857 PDGFDQ9GZP0 370 aaPredicted RBP21.49■■□□□ 1.03
FAM3D-204ENST00000489857 CCDC7Q96M83 1385 aa21.48■■□□□ 1.03
FAM3D-204ENST00000489857 ABCC6O95255 1503 aa21.47■■□□□ 1.03
FAM3D-204ENST00000489857 YY1P25490 414 aa21.47■■□□□ 1.03
FAM3D-204ENST00000489857 EXOC5O00471 708 aa21.46■■□□□ 1.03
FAM3D-204ENST00000489857 USP31Q70CQ4 1352 aa21.46■■□□□ 1.03
FAM3D-204ENST00000489857 MON2Q7Z3U7 1717 aa21.46■■□□□ 1.03
FAM3D-204ENST00000489857 TNS2Q63HR2 1409 aa21.46■■□□□ 1.03
FAM3D-204ENST00000489857 TXNRD1Q16881 649 aa21.45■■□□□ 1.02
FAM3D-204ENST00000489857 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.45■■□□□ 1.02
FAM3D-204ENST00000489857 SBNO2Q9Y2G9 1366 aa21.45■■□□□ 1.02
FAM3D-204ENST00000489857 CD163L1Q9NR16 1453 aa21.45■■□□□ 1.02
FAM3D-204ENST00000489857 ZBTB7AO95365 584 aa21.43■■□□□ 1.02
FAM3D-204ENST00000489857 NME9Q86XW9 330 aa21.43■■□□□ 1.02
FAM3D-204ENST00000489857 ERBB3P21860 1342 aa21.42■■□□□ 1.02
FAM3D-204ENST00000489857 USP54Q70EL1 1684 aa21.41■■□□□ 1.02
FAM3D-204ENST00000489857 PTGER2P43116 358 aa21.41■■□□□ 1.02
FAM3D-204ENST00000489857 STK32BQ9NY57 414 aa21.41■■□□□ 1.02
FAM3D-204ENST00000489857 SLC15A2Q16348 729 aa21.4■■□□□ 1.02
FAM3D-204ENST00000489857 NLRP2Q9NX02 1062 aa21.39■■□□□ 1.01
FAM3D-204ENST00000489857 ATF5Q9Y2D1 282 aaPredicted RBP21.39■■□□□ 1.01
FAM3D-204ENST00000489857 MYOM1P52179 1685 aa21.38■■□□□ 1.01
FAM3D-204ENST00000489857 NHSQ6T4R5 1651 aa21.38■■□□□ 1.01
FAM3D-204ENST00000489857 DCAF8L1A6NGE4 600 aa21.38■■□□□ 1.01
FAM3D-204ENST00000489857 ACSBG1Q96GR2 724 aa21.38■■□□□ 1.01
FAM3D-204ENST00000489857 CARD11Q9BXL7 1154 aa21.38■■□□□ 1.01
FAM3D-204ENST00000489857 TMC1Q8TDI8 760 aa21.37■■□□□ 1.01
FAM3D-204ENST00000489857 SLC12A5Q9H2X9 1139 aa21.37■■□□□ 1.01
FAM3D-204ENST00000489857 IL2RBP14784 551 aa21.36■■□□□ 1.01
FAM3D-204ENST00000489857 ANKRD24Q8TF21 1146 aa21.36■■□□□ 1.01
FAM3D-204ENST00000489857 HDGFL2Q7Z4V5 671 aaPredicted RBP21.35■■□□□ 1.01
FAM3D-204ENST00000489857 EDC4Q6P2E9 1401 aaKnown RBP21.35■■□□□ 1.01
FAM3D-204ENST00000489857 LTN1O94822 1766 aa21.34■■□□□ 1.01
FAM3D-204ENST00000489857 A0A1W2PP64 1363 aa21.34■■□□□ 1.01
FAM3D-204ENST00000489857 SGIP1Q9BQI5 828 aa21.33■■□□□ 1.01
FAM3D-204ENST00000489857 MTFR1LQ9H019 292 aa21.33■■□□□ 1.01
FAM3D-204ENST00000489857 PAPPAQ13219 1627 aa21.33■■□□□ 1
FAM3D-204ENST00000489857 FHDC1Q9C0D6 1143 aaPredicted RBP21.31■■□□□ 1
FAM3D-204ENST00000489857 SYT17Q9BSW7 474 aa21.3■■□□□ 1
FAM3D-204ENST00000489857 TERF2IPQ9NYB0 399 aa21.3■■□□□ 1
FAM3D-204ENST00000489857 BTAF1O14981 1849 aa21.29■■□□□ 1
FAM3D-204ENST00000489857 ZNF827Q17R98 1081 aa21.28■■□□□ 1
FAM3D-204ENST00000489857 IP6K1Q92551 441 aa21.28■■□□□ 1
FAM3D-204ENST00000489857 PUS7Q96PZ0 661 aaKnown RBP21.28■■□□□ 1
FAM3D-204ENST00000489857 LRRC4BQ9NT99 713 aa21.28■■□□□ 1
FAM3D-204ENST00000489857 LTV1Q96GA3 475 aaPredicted RBP21.25■□□□□ 0.99
FAM3D-204ENST00000489857 TONSLQ96HA7 1378 aa21.24■□□□□ 0.99
FAM3D-204ENST00000489857 DDX54Q8TDD1 881 aaKnown RBP21.24■□□□□ 0.99
FAM3D-204ENST00000489857 TESK2Q96S53 571 aa21.24■□□□□ 0.99
FAM3D-204ENST00000489857 ARXQ96QS3 562 aa21.23■□□□□ 0.99
FAM3D-204ENST00000489857 MAP3K19Q56UN5 1328 aa21.23■□□□□ 0.99
FAM3D-204ENST00000489857 AKT1S1Q96B36 256 aa21.22■□□□□ 0.99
FAM3D-204ENST00000489857 FBLN1P23142 703 aa21.21■□□□□ 0.99
FAM3D-204ENST00000489857 FAM208AQ9UK61 1670 aaKnown RBP21.21■□□□□ 0.99
FAM3D-204ENST00000489857 MAP3K5Q99683 1374 aa21.21■□□□□ 0.99
FAM3D-204ENST00000489857 ST20-MTHFSA0A0A6YYL1 179 aa21.2■□□□□ 0.98
FAM3D-204ENST00000489857 ZNF784Q8NCA9 323 aaPredicted RBP21.2■□□□□ 0.98
FAM3D-204ENST00000489857 HOXC9P31274 260 aa21.19■□□□□ 0.98
FAM3D-204ENST00000489857 SLC27A3Q5K4L6 730 aa21.19■□□□□ 0.98
FAM3D-204ENST00000489857 COG3Q96JB2 828 aa21.19■□□□□ 0.98
FAM3D-204ENST00000489857 AMPHP49418 695 aa21.17■□□□□ 0.98
FAM3D-204ENST00000489857 PRIM1P49642 420 aaKnown RBP21.17■□□□□ 0.98
FAM3D-204ENST00000489857 KCNQ4P56696 695 aa21.17■□□□□ 0.98
FAM3D-204ENST00000489857 PNPLA7Q6ZV29 1317 aa21.17■□□□□ 0.98
FAM3D-204ENST00000489857 NSD2O96028 1365 aa21.17■□□□□ 0.98
FAM3D-204ENST00000489857 ANKRD36BQ8N2N9 1353 aa21.17■□□□□ 0.98
FAM3D-204ENST00000489857 MEGF6O75095 1541 aa21.17■□□□□ 0.98
FAM3D-204ENST00000489857 KAT6BQ8WYB5 2073 aa21.17■□□□□ 0.98
FAM3D-204ENST00000489857 SYTL4Q96C24 671 aaPredicted RBP21.16■□□□□ 0.98
FAM3D-204ENST00000489857 SLC16A10Q8TF71 515 aa21.15■□□□□ 0.98
FAM3D-204ENST00000489857 DOT1LQ8TEK3 1739 aa21.15■□□□□ 0.98
FAM3D-204ENST00000489857 ZCRB1Q8TBF4 217 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms