RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 CAMKK2Q96RR4 588 aa12.96□□□□□ -0.33
GTF3C5-210ENST00000489842 BRD4O60885 1362 aaPredicted RBP12.95□□□□□ -0.34
GTF3C5-210ENST00000489842 TRIM26Q12899 539 aaPredicted RBP12.95□□□□□ -0.34
GTF3C5-210ENST00000489842 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
GTF3C5-210ENST00000489842 PEAK1Q9H792 1746 aa12.95□□□□□ -0.34
GTF3C5-210ENST00000489842 SBF2Q86WG5 1849 aa12.95□□□□□ -0.34
GTF3C5-210ENST00000489842 SBNO2Q9Y2G9 1366 aa12.94□□□□□ -0.34
GTF3C5-210ENST00000489842 NUP188Q5SRE5 1749 aa12.94□□□□□ -0.34
GTF3C5-210ENST00000489842 ST20-MTHFSA0A0A6YYL1 179 aa12.94□□□□□ -0.34
GTF3C5-210ENST00000489842 FBLN1P23142 703 aa12.94□□□□□ -0.34
GTF3C5-210ENST00000489842 LTN1O94822 1766 aa12.94□□□□□ -0.34
GTF3C5-210ENST00000489842 WDR17Q8IZU2 1322 aa12.93□□□□□ -0.34
GTF3C5-210ENST00000489842 RREB1Q92766 1687 aa12.93□□□□□ -0.34
GTF3C5-210ENST00000489842 CSB-PGBD3P0DP91 1061 aa12.93□□□□□ -0.34
GTF3C5-210ENST00000489842 TESK2Q96S53 571 aa12.93□□□□□ -0.34
GTF3C5-210ENST00000489842 DISP2A7MBM2 1401 aa12.93□□□□□ -0.34
GTF3C5-210ENST00000489842 A0A1W2PP64 1363 aa12.93□□□□□ -0.34
GTF3C5-210ENST00000489842 TTC21AQ8NDW8 1320 aa12.92□□□□□ -0.34
GTF3C5-210ENST00000489842 MARCH10Q8NA82 808 aaPredicted RBP12.92□□□□□ -0.34
GTF3C5-210ENST00000489842 THRAP3Q9Y2W1 955 aaKnown RBP12.92□□□□□ -0.34
GTF3C5-210ENST00000489842 DDB1Q16531 1140 aa12.91□□□□□ -0.34
GTF3C5-210ENST00000489842 KCNH5Q8NCM2 988 aa12.9□□□□□ -0.34
GTF3C5-210ENST00000489842 LRP5O75197 1615 aa12.9□□□□□ -0.34
GTF3C5-210ENST00000489842 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
GTF3C5-210ENST00000489842 HDGFL2Q7Z4V5 671 aaPredicted RBP12.89□□□□□ -0.35
GTF3C5-210ENST00000489842 CARD10Q9BWT7 1032 aa12.89□□□□□ -0.35
GTF3C5-210ENST00000489842 USP31Q70CQ4 1352 aa12.89□□□□□ -0.35
GTF3C5-210ENST00000489842 LTV1Q96GA3 475 aaPredicted RBP12.88□□□□□ -0.35
GTF3C5-210ENST00000489842 OVOS2A0A0G2JMS6 1433 aa12.88□□□□□ -0.35
GTF3C5-210ENST00000489842 OVOS2A0A0J9YW53 1432 aa12.88□□□□□ -0.35
GTF3C5-210ENST00000489842 OVOS2Q6IE36 1432 aa12.88□□□□□ -0.35
GTF3C5-210ENST00000489842 RGPD2P0DJD1 1756 aa12.87□□□□□ -0.35
GTF3C5-210ENST00000489842 KCNQ2O43526 872 aa12.87□□□□□ -0.35
GTF3C5-210ENST00000489842 ANO8Q9HCE9 1232 aaPredicted RBP12.87□□□□□ -0.35
GTF3C5-210ENST00000489842 EDC4Q6P2E9 1401 aaKnown RBP12.87□□□□□ -0.35
GTF3C5-210ENST00000489842 PROM2Q8N271 834 aa12.86□□□□□ -0.35
GTF3C5-210ENST00000489842 ANKRD24Q8TF21 1146 aa12.86□□□□□ -0.35
GTF3C5-210ENST00000489842 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
GTF3C5-210ENST00000489842 PCGF6Q9BYE7 350 aa12.86□□□□□ -0.35
GTF3C5-210ENST00000489842 PDGFDQ9GZP0 370 aaPredicted RBP12.86□□□□□ -0.35
GTF3C5-210ENST00000489842 NLRP2Q9NX02 1062 aa12.86□□□□□ -0.35
GTF3C5-210ENST00000489842 ERBB3P21860 1342 aa12.85□□□□□ -0.35
GTF3C5-210ENST00000489842 USP47Q96K76 1375 aa12.84□□□□□ -0.35
GTF3C5-210ENST00000489842 TERF2IPQ9NYB0 399 aa12.84□□□□□ -0.35
GTF3C5-210ENST00000489842 EXOC5O00471 708 aa12.83□□□□□ -0.36
GTF3C5-210ENST00000489842 GGNBP2Q9H3C7 697 aa12.83□□□□□ -0.36
GTF3C5-210ENST00000489842 TNS2Q63HR2 1409 aa12.82□□□□□ -0.36
GTF3C5-210ENST00000489842 RRS1Q15050 365 aaKnown RBP12.82□□□□□ -0.36
GTF3C5-210ENST00000489842 BCL11BQ9C0K0 894 aaPredicted RBP12.82□□□□□ -0.36
GTF3C5-210ENST00000489842 MAP3K19Q56UN5 1328 aa12.82□□□□□ -0.36
GTF3C5-210ENST00000489842 PARD3Q8TEW0 1356 aa12.81□□□□□ -0.36
GTF3C5-210ENST00000489842 CCDC7Q96M83 1385 aa12.81□□□□□ -0.36
GTF3C5-210ENST00000489842 ABCC6O95255 1503 aa12.81□□□□□ -0.36
GTF3C5-210ENST00000489842 MYOM1P52179 1685 aa12.8□□□□□ -0.36
GTF3C5-210ENST00000489842 NBPF14Q5TI25 921 aa12.8□□□□□ -0.36
GTF3C5-210ENST00000489842 USHBP1Q8N6Y0 703 aa12.8□□□□□ -0.36
GTF3C5-210ENST00000489842 IP6K1Q92551 441 aa12.8□□□□□ -0.36
GTF3C5-210ENST00000489842 KAT6BQ8WYB5 2073 aa12.8□□□□□ -0.36
GTF3C5-210ENST00000489842 NHSQ6T4R5 1651 aa12.8□□□□□ -0.36
GTF3C5-210ENST00000489842 BTAF1O14981 1849 aa12.79□□□□□ -0.36
GTF3C5-210ENST00000489842 FYB1O15117 783 aa12.79□□□□□ -0.36
GTF3C5-210ENST00000489842 PLSCR1O15162 318 aa12.79□□□□□ -0.36
GTF3C5-210ENST00000489842 IL2RBP14784 551 aa12.79□□□□□ -0.36
GTF3C5-210ENST00000489842 HOXC9P31274 260 aa12.79□□□□□ -0.36
GTF3C5-210ENST00000489842 COG3Q96JB2 828 aa12.79□□□□□ -0.36
GTF3C5-210ENST00000489842 PUS7Q96PZ0 661 aaKnown RBP12.79□□□□□ -0.36
GTF3C5-210ENST00000489842 CDCA7Q9BWT1 371 aaPredicted RBP12.79□□□□□ -0.36
GTF3C5-210ENST00000489842 FAM208AQ9UK61 1670 aaKnown RBP12.79□□□□□ -0.36
GTF3C5-210ENST00000489842 ANKRD36BQ8N2N9 1353 aa12.79□□□□□ -0.36
GTF3C5-210ENST00000489842 RGPD3A6NKT7 1758 aaPredicted RBP12.79□□□□□ -0.36
GTF3C5-210ENST00000489842 RGPD4Q7Z3J3 1758 aa12.79□□□□□ -0.36
GTF3C5-210ENST00000489842 CASZ1Q86V15 1759 aa12.79□□□□□ -0.36
GTF3C5-210ENST00000489842 TMF1P82094 1093 aa12.78□□□□□ -0.36
GTF3C5-210ENST00000489842 TXNRD1Q16881 649 aa12.78□□□□□ -0.36
GTF3C5-210ENST00000489842 DDX54Q8TDD1 881 aaKnown RBP12.78□□□□□ -0.36
GTF3C5-210ENST00000489842 CARD14Q9BXL6 1004 aa12.78□□□□□ -0.36
GTF3C5-210ENST00000489842 SHANK3Q9BYB0 1731 aa12.78□□□□□ -0.36
GTF3C5-210ENST00000489842 KIF20BQ96Q89 1820 aa12.78□□□□□ -0.36
GTF3C5-210ENST00000489842 ZBTB7AO95365 584 aa12.77□□□□□ -0.37
GTF3C5-210ENST00000489842 AMPHP49418 695 aa12.77□□□□□ -0.37
GTF3C5-210ENST00000489842 KCNQ4P56696 695 aa12.77□□□□□ -0.37
GTF3C5-210ENST00000489842 POLR3GLQ9BT43 218 aa12.77□□□□□ -0.37
GTF3C5-210ENST00000489842 ATF5Q9Y2D1 282 aaPredicted RBP12.76□□□□□ -0.37
GTF3C5-210ENST00000489842 BCL9O00512 1426 aa12.76□□□□□ -0.37
GTF3C5-210ENST00000489842 MEGF6O75095 1541 aa12.76□□□□□ -0.37
GTF3C5-210ENST00000489842 NBPF6Q5VWK0 638 aa12.75□□□□□ -0.37
GTF3C5-210ENST00000489842 NBPF4Q96M43 638 aa12.75□□□□□ -0.37
GTF3C5-210ENST00000489842 DOT1LQ8TEK3 1739 aa12.74□□□□□ -0.37
GTF3C5-210ENST00000489842 NINLQ9Y2I6 1382 aa12.74□□□□□ -0.37
GTF3C5-210ENST00000489842 HSP90AB2PQ58FF8 381 aa12.74□□□□□ -0.37
GTF3C5-210ENST00000489842 LRRC4BQ9NT99 713 aa12.74□□□□□ -0.37
GTF3C5-210ENST00000489842 NSD3Q9BZ95 1437 aa12.73□□□□□ -0.37
GTF3C5-210ENST00000489842 C11orf95C9JLR9 678 aaPredicted RBP12.73□□□□□ -0.37
GTF3C5-210ENST00000489842 ZNF827Q17R98 1081 aa12.73□□□□□ -0.37
GTF3C5-210ENST00000489842 SPON1Q9HCB6 807 aa12.73□□□□□ -0.37
GTF3C5-210ENST00000489842 EMILIN1Q9Y6C2 1016 aa12.73□□□□□ -0.37
GTF3C5-210ENST00000489842 PRIM1P49642 420 aaKnown RBP12.72□□□□□ -0.37
GTF3C5-210ENST00000489842 SLC15A2Q16348 729 aa12.72□□□□□ -0.37
GTF3C5-210ENST00000489842 SYTL4Q96C24 671 aaPredicted RBP12.72□□□□□ -0.37
GTF3C5-210ENST00000489842 PPP1R1BQ9UD71 204 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms