RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 LCE2BO14633 110 aa10.97□□□□□ -0.65
VPS26A-206ENST00000489794 SLFNL1Q499Z3 407 aa10.97□□□□□ -0.65
VPS26A-206ENST00000489794 CDK15Q96Q40 435 aa10.96□□□□□ -0.65
VPS26A-206ENST00000489794 VASH1Q7L8A9 365 aaPredicted RBP10.95□□□□□ -0.66
VPS26A-206ENST00000489794 SIAH2O43255 324 aa10.94□□□□□ -0.66
VPS26A-206ENST00000489794 LZTS3O60299 673 aaPredicted RBP10.94□□□□□ -0.66
VPS26A-206ENST00000489794 MRGPRX2Q96LB1 330 aa10.94□□□□□ -0.66
VPS26A-206ENST00000489794 ESPNB1AK53 854 aa10.93□□□□□ -0.66
VPS26A-206ENST00000489794 RNF135Q8IUD6 432 aa10.93□□□□□ -0.66
VPS26A-206ENST00000489794 KCTD15Q96SI1 283 aaPredicted RBP10.93□□□□□ -0.66
VPS26A-206ENST00000489794 PPP1R12CQ9BZL4 782 aa10.93□□□□□ -0.66
VPS26A-206ENST00000489794 PRR20EP86478 221 aa10.92□□□□□ -0.66
VPS26A-206ENST00000489794 PRR20CP86479 221 aa10.92□□□□□ -0.66
VPS26A-206ENST00000489794 PRR20DP86480 221 aa10.92□□□□□ -0.66
VPS26A-206ENST00000489794 PRR20BP86481 221 aa10.92□□□□□ -0.66
VPS26A-206ENST00000489794 PRR20AP86496 221 aa10.92□□□□□ -0.66
VPS26A-206ENST00000489794 MAP7D1Q3KQU3 841 aa10.92□□□□□ -0.66
VPS26A-206ENST00000489794 TRIM67Q6ZTA4 783 aa10.92□□□□□ -0.66
VPS26A-206ENST00000489794 ATP9BO43861 1147 aa10.91□□□□□ -0.66
VPS26A-206ENST00000489794 NR5A1Q13285 461 aa10.91□□□□□ -0.66
VPS26A-206ENST00000489794 ARID5BQ14865 1188 aa10.91□□□□□ -0.66
VPS26A-206ENST00000489794 SNIP1Q8TAD8 396 aaKnown RBP10.91□□□□□ -0.66
VPS26A-206ENST00000489794 UCN2Q96RP3 112 aa10.91□□□□□ -0.66
VPS26A-206ENST00000489794 PALM3A6NDB9 673 aaPredicted RBP10.9□□□□□ -0.66
VPS26A-206ENST00000489794 ADH1CP00326 375 aa10.9□□□□□ -0.66
VPS26A-206ENST00000489794 DHX9Q08211 1270 aaKnown RBP10.9□□□□□ -0.66
VPS26A-206ENST00000489794 FOXC1Q12948 553 aa10.9□□□□□ -0.66
VPS26A-206ENST00000489794 PHTF2Q8N3S3 785 aa10.9□□□□□ -0.66
VPS26A-206ENST00000489794 PKD2L1Q9P0L9 805 aa10.9□□□□□ -0.66
VPS26A-206ENST00000489794 GIGYF1O75420 1035 aaPredicted RBP10.89□□□□□ -0.67
VPS26A-206ENST00000489794 CHIC2Q9UKJ5 165 aa10.89□□□□□ -0.67
VPS26A-206ENST00000489794 GDF9O60383 454 aa10.88□□□□□ -0.67
VPS26A-206ENST00000489794 SKIP12755 728 aa10.88□□□□□ -0.67
VPS26A-206ENST00000489794 PLEKHM2Q8IWE5 1019 aa10.88□□□□□ -0.67
VPS26A-206ENST00000489794 CYP4X1Q8N118 509 aa10.88□□□□□ -0.67
VPS26A-206ENST00000489794 ARID3AQ99856 593 aa10.88□□□□□ -0.67
VPS26A-206ENST00000489794 TFIP11Q9UBB9 837 aaKnown RBP10.88□□□□□ -0.67
VPS26A-206ENST00000489794 DGAT1O75907 488 aa10.87□□□□□ -0.67
VPS26A-206ENST00000489794 PKDCCQ504Y2 493 aa10.87□□□□□ -0.67
VPS26A-206ENST00000489794 PLPP7Q8NBV4 271 aa10.87□□□□□ -0.67
VPS26A-206ENST00000489794 SIRT1Q96EB6 747 aa10.87□□□□□ -0.67
VPS26A-206ENST00000489794 TLL2Q9Y6L7 1015 aa10.87□□□□□ -0.67
VPS26A-206ENST00000489794 TTC24A2A3L6 582 aaPredicted RBP10.86□□□□□ -0.67
VPS26A-206ENST00000489794 PPP1R15AO75807 674 aaPredicted RBP10.86□□□□□ -0.67
VPS26A-206ENST00000489794 FSHRP23945 695 aa10.86□□□□□ -0.67
VPS26A-206ENST00000489794 GRM5P41594 1212 aa10.86□□□□□ -0.67
VPS26A-206ENST00000489794 TBC1D9Q6ZT07 1266 aa10.86□□□□□ -0.67
VPS26A-206ENST00000489794 DOLKQ9UPQ8 538 aa10.86□□□□□ -0.67
VPS26A-206ENST00000489794 MAFBQ9Y5Q3 323 aaPredicted RBP10.86□□□□□ -0.67
VPS26A-206ENST00000489794 WASF2Q9Y6W5 498 aa10.86□□□□□ -0.67
VPS26A-206ENST00000489794 USP17L5A8MUK1 530 aa10.85□□□□□ -0.67
VPS26A-206ENST00000489794 ALDH1A1P00352 501 aa10.85□□□□□ -0.67
VPS26A-206ENST00000489794 INTS6LQ5JSJ4 861 aaKnown RBP10.85□□□□□ -0.67
VPS26A-206ENST00000489794 PIK3CDO00329 1044 aa10.84□□□□□ -0.67
VPS26A-206ENST00000489794 LMOD1P29536 600 aaPredicted RBP10.84□□□□□ -0.67
VPS26A-206ENST00000489794 EML3Q32P44 896 aa10.84□□□□□ -0.67
VPS26A-206ENST00000489794 CFAP70Q5T0N1 1121 aa10.84□□□□□ -0.67
VPS26A-206ENST00000489794 CCDC116Q8IYX3 515 aa10.84□□□□□ -0.67
VPS26A-206ENST00000489794 TNFRSF10AO00220 468 aa10.83□□□□□ -0.68
VPS26A-206ENST00000489794 USP17L3A6NCW0 530 aa10.82□□□□□ -0.68
VPS26A-206ENST00000489794 USP17L4A6NCW7 530 aa10.82□□□□□ -0.68
VPS26A-206ENST00000489794 USP4Q13107 963 aa10.82□□□□□ -0.68
VPS26A-206ENST00000489794 USP17L2Q6R6M4 530 aa10.82□□□□□ -0.68
VPS26A-206ENST00000489794 USP17L1Q7RTZ2 530 aa10.82□□□□□ -0.68
VPS26A-206ENST00000489794 PBXIP1Q96AQ6 731 aa10.82□□□□□ -0.68
VPS26A-206ENST00000489794 TOR4AQ9NXH8 423 aa10.82□□□□□ -0.68
VPS26A-206ENST00000489794 PGPEP1Q9NXJ5 209 aa10.82□□□□□ -0.68
VPS26A-206ENST00000489794 PCDHB11Q9Y5F2 797 aa10.82□□□□□ -0.68
VPS26A-206ENST00000489794 EMILIN1Q9Y6C2 1016 aa10.82□□□□□ -0.68
VPS26A-206ENST00000489794 CCDC85AQ96PX6 553 aaPredicted RBP10.81□□□□□ -0.68
VPS26A-206ENST00000489794 ESF1Q9H501 851 aaKnown RBP10.81□□□□□ -0.68
VPS26A-206ENST00000489794 ATP5J2-PTCD1G3V325 749 aa10.8□□□□□ -0.68
VPS26A-206ENST00000489794 ERVH48-1M5A8F1 160 aa10.8□□□□□ -0.68
VPS26A-206ENST00000489794 MYCP01106 439 aaPredicted RBP10.8□□□□□ -0.68
VPS26A-206ENST00000489794 ZNF787Q6DD87 383 aa10.8□□□□□ -0.68
VPS26A-206ENST00000489794 TRIM50Q86XT4 487 aa10.8□□□□□ -0.68
VPS26A-206ENST00000489794 NOD1Q9Y239 953 aa10.8□□□□□ -0.68
VPS26A-206ENST00000489794 ACIN1Q9UKV3 1341 aaKnown RBP10.8□□□□□ -0.68
VPS26A-206ENST00000489794 RAB15P59190 212 aa10.79□□□□□ -0.68
VPS26A-206ENST00000489794 MYT1Q01538 1121 aa10.79□□□□□ -0.68
VPS26A-206ENST00000489794 NNTQ13423 1086 aa10.79□□□□□ -0.68
VPS26A-206ENST00000489794 NCOA4Q13772 614 aa10.79□□□□□ -0.68
VPS26A-206ENST00000489794 VRTNQ9H8Y1 702 aa10.79□□□□□ -0.68
VPS26A-206ENST00000489794 FAM187AA6NFU0 413 aa10.78□□□□□ -0.68
VPS26A-206ENST00000489794 RFX1P22670 979 aa10.78□□□□□ -0.68
VPS26A-206ENST00000489794 PPP1R26Q5T8A7 1209 aaPredicted RBP10.78□□□□□ -0.68
VPS26A-206ENST00000489794 ATP1A2P50993 1020 aa10.77□□□□□ -0.69
VPS26A-206ENST00000489794 OXLD1Q5BKU9 147 aa10.77□□□□□ -0.69
VPS26A-206ENST00000489794 ERVK-9P63128 1117 aa10.76□□□□□ -0.69
VPS26A-206ENST00000489794 CC2D2BQ6DHV5 1058 aa10.76□□□□□ -0.69
VPS26A-206ENST00000489794 ARXQ96QS3 562 aa10.76□□□□□ -0.69
VPS26A-206ENST00000489794 MKRN1Q9UHC7 482 aaKnown RBP10.76□□□□□ -0.69
VPS26A-206ENST00000489794 J3QL48 77 aa10.75□□□□□ -0.69
VPS26A-206ENST00000489794 NR3C2P08235 984 aa10.75□□□□□ -0.69
VPS26A-206ENST00000489794 SMPD1P17405 629 aa10.75□□□□□ -0.69
VPS26A-206ENST00000489794 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
VPS26A-206ENST00000489794 DEPDC4Q8N2C3 294 aa10.75□□□□□ -0.69
VPS26A-206ENST00000489794 SRPK2P78362 688 aaKnown RBP10.74□□□□□ -0.69
VPS26A-206ENST00000489794 TSGA10IPQ3SY00 556 aa10.74□□□□□ -0.69
VPS26A-206ENST00000489794 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms