RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 NBPF8Q3BBV2 869 aa8.27□□□□□ -1.09
CNOT9-207ENST00000489687 USP35Q9P2H5 1018 aa8.27□□□□□ -1.09
CNOT9-207ENST00000489687 TAOK2Q9UL54 1235 aa8.27□□□□□ -1.09
CNOT9-207ENST00000489687 CCDC61Q9Y6R9 512 aa8.27□□□□□ -1.09
CNOT9-207ENST00000489687 AKAP12Q02952 1782 aa8.27□□□□□ -1.09
CNOT9-207ENST00000489687 USP6P35125 1406 aa8.27□□□□□ -1.09
CNOT9-207ENST00000489687 USP19O94966 1318 aa8.27□□□□□ -1.09
CNOT9-207ENST00000489687 SPATA31A5Q5VU36 1347 aa8.27□□□□□ -1.09
CNOT9-207ENST00000489687 SPATA31A7Q8IWB4 1347 aa8.27□□□□□ -1.09
CNOT9-207ENST00000489687 KRT27Q7Z3Y8 459 aa8.26□□□□□ -1.09
CNOT9-207ENST00000489687 ABTB2Q8N961 1025 aa8.26□□□□□ -1.09
CNOT9-207ENST00000489687 SSH2Q76I76 1423 aa8.26□□□□□ -1.09
CNOT9-207ENST00000489687 RGPD1P0DJD0 1748 aa8.26□□□□□ -1.09
CNOT9-207ENST00000489687 SLIT3O75094 1523 aa8.25□□□□□ -1.09
CNOT9-207ENST00000489687 SOX12O15370 315 aa8.25□□□□□ -1.09
CNOT9-207ENST00000489687 CABP1Q9NZU7 370 aa8.25□□□□□ -1.09
CNOT9-207ENST00000489687 MON2Q7Z3U7 1717 aa8.25□□□□□ -1.09
CNOT9-207ENST00000489687 COL5A2P05997 1499 aaPredicted RBP8.25□□□□□ -1.09
CNOT9-207ENST00000489687 RGPD5Q99666 1765 aa8.25□□□□□ -1.09
CNOT9-207ENST00000489687 PLEKHG3A1L390 1219 aa8.24□□□□□ -1.09
CNOT9-207ENST00000489687 LARP1Q6PKG0 1096 aaKnown RBP8.24□□□□□ -1.09
CNOT9-207ENST00000489687 LRRC37A3O60309 1634 aa8.24□□□□□ -1.09
CNOT9-207ENST00000489687 SPATA31A1Q5TZJ5 1347 aa8.24□□□□□ -1.09
CNOT9-207ENST00000489687 WNK3Q9BYP7 1800 aa8.24□□□□□ -1.09
CNOT9-207ENST00000489687 EVC2Q86UK5 1308 aa8.23□□□□□ -1.09
CNOT9-207ENST00000489687 CPDO75976 1380 aa8.22□□□□□ -1.09
CNOT9-207ENST00000489687 TONSLQ96HA7 1378 aa8.22□□□□□ -1.09
CNOT9-207ENST00000489687 COL18A1P39060 1754 aa8.22□□□□□ -1.09
CNOT9-207ENST00000489687 PSDA5PKW4 1024 aaPredicted RBP8.22□□□□□ -1.09
CNOT9-207ENST00000489687 ONECUT3O60422 494 aaPredicted RBP8.22□□□□□ -1.09
CNOT9-207ENST00000489687 ZRANB1Q9UGI0 708 aa8.22□□□□□ -1.09
CNOT9-207ENST00000489687 NFAT5O94916 1531 aa8.22□□□□□ -1.09
CNOT9-207ENST00000489687 CPSF1Q10570 1443 aaKnown RBP8.21□□□□□ -1.09
CNOT9-207ENST00000489687 CD163L1Q9NR16 1453 aa8.21□□□□□ -1.09
CNOT9-207ENST00000489687 PARP4Q9UKK3 1724 aaKnown RBP8.21□□□□□ -1.09
CNOT9-207ENST00000489687 GCP02774 474 aa8.21□□□□□ -1.1
CNOT9-207ENST00000489687 NLRP6P59044 892 aa8.21□□□□□ -1.1
CNOT9-207ENST00000489687 SF3B2Q13435 895 aaKnown RBP8.21□□□□□ -1.1
CNOT9-207ENST00000489687 GSE1Q14687 1217 aa8.21□□□□□ -1.1
CNOT9-207ENST00000489687 CARD11Q9BXL7 1154 aa8.21□□□□□ -1.1
CNOT9-207ENST00000489687 LTN1O94822 1766 aa8.2□□□□□ -1.1
CNOT9-207ENST00000489687 TRIM37O94972 964 aa8.2□□□□□ -1.1
CNOT9-207ENST00000489687 EVA1CP58658 441 aa8.2□□□□□ -1.1
CNOT9-207ENST00000489687 EN1Q05925 392 aaPredicted RBP8.2□□□□□ -1.1
CNOT9-207ENST00000489687 NLRP13Q86W25 1043 aa8.2□□□□□ -1.1
CNOT9-207ENST00000489687 CCDC125Q86Z20 511 aa8.2□□□□□ -1.1
CNOT9-207ENST00000489687 ANP32EQ9BTT0 268 aa8.2□□□□□ -1.1
CNOT9-207ENST00000489687 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.2□□□□□ -1.1
CNOT9-207ENST00000489687 TTC21BQ7Z4L5 1316 aa8.2□□□□□ -1.1
CNOT9-207ENST00000489687 KTN1Q86UP2 1357 aaKnown RBP8.2□□□□□ -1.1
CNOT9-207ENST00000489687 NUP188Q5SRE5 1749 aa8.2□□□□□ -1.1
CNOT9-207ENST00000489687 RREB1Q92766 1687 aa8.19□□□□□ -1.1
CNOT9-207ENST00000489687 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.19□□□□□ -1.1
CNOT9-207ENST00000489687 PEAK1Q9H792 1746 aa8.19□□□□□ -1.1
CNOT9-207ENST00000489687 CRB1P82279 1406 aa8.19□□□□□ -1.1
CNOT9-207ENST00000489687 BAG6P46379 1132 aa8.18□□□□□ -1.1
CNOT9-207ENST00000489687 NME9Q86XW9 330 aa8.18□□□□□ -1.1
CNOT9-207ENST00000489687 TCP11L2Q8N4U5 519 aa8.18□□□□□ -1.1
CNOT9-207ENST00000489687 TMC1Q8TDI8 760 aa8.18□□□□□ -1.1
CNOT9-207ENST00000489687 AXIN2Q9Y2T1 843 aa8.18□□□□□ -1.1
CNOT9-207ENST00000489687 GTF3C3Q9Y5Q9 886 aa8.18□□□□□ -1.1
CNOT9-207ENST00000489687 A0A1W2PP64 1363 aa8.18□□□□□ -1.1
CNOT9-207ENST00000489687 SBNO2Q9Y2G9 1366 aa8.18□□□□□ -1.1
CNOT9-207ENST00000489687 LRP5O75197 1615 aa8.18□□□□□ -1.1
CNOT9-207ENST00000489687 USP54Q70EL1 1684 aa8.18□□□□□ -1.1
CNOT9-207ENST00000489687 SBF2Q86WG5 1849 aa8.17□□□□□ -1.1
CNOT9-207ENST00000489687 ECM2O94769 699 aaPredicted RBP8.17□□□□□ -1.1
CNOT9-207ENST00000489687 R3HDM1Q15032 1099 aaKnown RBP8.17□□□□□ -1.1
CNOT9-207ENST00000489687 EZH2Q15910 746 aaKnown RBP8.17□□□□□ -1.1
CNOT9-207ENST00000489687 AATKQ6ZMQ8 1374 aa8.17□□□□□ -1.1
CNOT9-207ENST00000489687 UTRNP46939 3433 aa8.16□□□□□ -1.1
CNOT9-207ENST00000489687 DISP2A7MBM2 1401 aa8.16□□□□□ -1.1
CNOT9-207ENST00000489687 BRD4O60885 1362 aaPredicted RBP8.16□□□□□ -1.1
CNOT9-207ENST00000489687 PRR29P0C7W0 189 aa8.16□□□□□ -1.1
CNOT9-207ENST00000489687 TOM1L2Q6ZVM7 507 aa8.16□□□□□ -1.1
CNOT9-207ENST00000489687 OVOS2A0A0G2JMS6 1433 aa8.15□□□□□ -1.1
CNOT9-207ENST00000489687 OVOS2A0A0J9YW53 1432 aa8.15□□□□□ -1.1
CNOT9-207ENST00000489687 OVOS2Q6IE36 1432 aa8.15□□□□□ -1.1
CNOT9-207ENST00000489687 WDR17Q8IZU2 1322 aa8.15□□□□□ -1.1
CNOT9-207ENST00000489687 APBA3O96018 575 aa8.15□□□□□ -1.1
CNOT9-207ENST00000489687 CSB-PGBD3P0DP91 1061 aa8.15□□□□□ -1.1
CNOT9-207ENST00000489687 PDE3BQ13370 1112 aa8.15□□□□□ -1.1
CNOT9-207ENST00000489687 BARGINQ6ZT62 677 aa8.15□□□□□ -1.1
CNOT9-207ENST00000489687 PTF1AQ7RTS3 328 aa8.15□□□□□ -1.1
CNOT9-207ENST00000489687 ARHGEF25Q86VW2 580 aa8.15□□□□□ -1.1
CNOT9-207ENST00000489687 SLC12A5Q9H2X9 1139 aa8.15□□□□□ -1.1
CNOT9-207ENST00000489687 MYOM1P52179 1685 aa8.14□□□□□ -1.11
CNOT9-207ENST00000489687 GOLGB1Q14789 3259 aaKnown RBP8.14□□□□□ -1.11
CNOT9-207ENST00000489687 EDC4Q6P2E9 1401 aaKnown RBP8.14□□□□□ -1.11
CNOT9-207ENST00000489687 USP47Q96K76 1375 aa8.14□□□□□ -1.11
CNOT9-207ENST00000489687 TTC21AQ8NDW8 1320 aa8.14□□□□□ -1.11
CNOT9-207ENST00000489687 ST20-MTHFSA0A0A6YYL1 179 aa8.14□□□□□ -1.11
CNOT9-207ENST00000489687 FAM196AQ6ZSG2 479 aa8.14□□□□□ -1.11
CNOT9-207ENST00000489687 TESK2Q96S53 571 aa8.14□□□□□ -1.11
CNOT9-207ENST00000489687 TNS2Q63HR2 1409 aa8.13□□□□□ -1.11
CNOT9-207ENST00000489687 RGPD2P0DJD1 1756 aa8.13□□□□□ -1.11
CNOT9-207ENST00000489687 CAMKK2Q96RR4 588 aa8.13□□□□□ -1.11
CNOT9-207ENST00000489687 KAT6BQ8WYB5 2073 aa8.13□□□□□ -1.11
CNOT9-207ENST00000489687 ABCC6O95255 1503 aa8.13□□□□□ -1.11
CNOT9-207ENST00000489687 KIF20BQ96Q89 1820 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms