RNA–Protein interactions for RNA: ENST00000489676.1

TFF3-203, Transcript of trefoil factor 3, humanhuman

TSL 2

Gene TFF3, Length 419 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-203ENST00000489676 BLMP54132 1417 aaPredicted RBP14.76□□□□□ -0.05
TFF3-203ENST00000489676 ZC3H6P61129 1189 aaKnown RBP14.76□□□□□ -0.05
TFF3-203ENST00000489676 RGS17Q9UGC6 210 aaPredicted RBP14.76□□□□□ -0.05
TFF3-203ENST00000489676 SLIT2O94813 1529 aa14.76□□□□□ -0.05
TFF3-203ENST00000489676 RGPD1P0DJD0 1748 aa14.75□□□□□ -0.05
TFF3-203ENST00000489676 FAM208AQ9UK61 1670 aaKnown RBP14.75□□□□□ -0.05
TFF3-203ENST00000489676 MTHFSP49914 203 aa14.75□□□□□ -0.05
TFF3-203ENST00000489676 HOXC9P31274 260 aa14.74□□□□□ -0.05
TFF3-203ENST00000489676 HAP1P54257 671 aaPredicted RBP14.74□□□□□ -0.05
TFF3-203ENST00000489676 PRDM11Q9NQV5 511 aa14.74□□□□□ -0.05
TFF3-203ENST00000489676 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.74□□□□□ -0.05
TFF3-203ENST00000489676 COL5A2P05997 1499 aaPredicted RBP14.74□□□□□ -0.05
TFF3-203ENST00000489676 NUTM2BA6NNL0 878 aaPredicted RBP14.73□□□□□ -0.05
TFF3-203ENST00000489676 NUTM2EB1AL46 878 aaPredicted RBP14.73□□□□□ -0.05
TFF3-203ENST00000489676 CHRNA2Q15822 529 aa14.73□□□□□ -0.05
TFF3-203ENST00000489676 NUTM2AQ8IVF1 878 aaPredicted RBP14.73□□□□□ -0.05
TFF3-203ENST00000489676 IP6K1Q92551 441 aa14.73□□□□□ -0.05
TFF3-203ENST00000489676 FAM83GA6ND36 823 aa14.72□□□□□ -0.05
TFF3-203ENST00000489676 ADAMTS2O95450 1211 aa14.72□□□□□ -0.05
TFF3-203ENST00000489676 CCDC184Q52MB2 194 aa14.72□□□□□ -0.05
TFF3-203ENST00000489676 MIER1Q8N108 512 aa14.72□□□□□ -0.05
TFF3-203ENST00000489676 AXIN2Q9Y2T1 843 aa14.72□□□□□ -0.05
TFF3-203ENST00000489676 AMPHP49418 695 aa14.71□□□□□ -0.05
TFF3-203ENST00000489676 HSP90AB2PQ58FF8 381 aa14.71□□□□□ -0.05
TFF3-203ENST00000489676 NCAPD2Q15021 1401 aa14.71□□□□□ -0.05
TFF3-203ENST00000489676 RGPD2P0DJD1 1756 aa14.7□□□□□ -0.06
TFF3-203ENST00000489676 ERBB3P21860 1342 aa14.7□□□□□ -0.06
TFF3-203ENST00000489676 PPM1GO15355 546 aaPredicted RBP14.69□□□□□ -0.06
TFF3-203ENST00000489676 BCL9LQ86UU0 1499 aa14.69□□□□□ -0.06
TFF3-203ENST00000489676 ZBTB7CA1YPR0 619 aa14.68□□□□□ -0.06
TFF3-203ENST00000489676 CCER2I3L3R5 266 aa14.68□□□□□ -0.06
TFF3-203ENST00000489676 EIF4A2Q14240 407 aaKnown RBP14.68□□□□□ -0.06
TFF3-203ENST00000489676 IL13P35225 146 aa14.67□□□□□ -0.06
TFF3-203ENST00000489676 POTEAQ6S8J7 498 aa14.67□□□□□ -0.06
TFF3-203ENST00000489676 FNBP4Q8N3X1 1017 aaPredicted RBP14.67□□□□□ -0.06
TFF3-203ENST00000489676 WNK3Q9BYP7 1800 aa14.66□□□□□ -0.06
TFF3-203ENST00000489676 ANKRD24Q8TF21 1146 aa14.66□□□□□ -0.06
TFF3-203ENST00000489676 CFAP53Q96M91 514 aa14.66□□□□□ -0.06
TFF3-203ENST00000489676 BTG4Q9NY30 223 aa14.66□□□□□ -0.06
TFF3-203ENST00000489676 WDR17Q8IZU2 1322 aa14.66□□□□□ -0.06
TFF3-203ENST00000489676 C8orf37Q96NL8 207 aa14.65□□□□□ -0.06
TFF3-203ENST00000489676 IGSF1Q8N6C5 1336 aa14.65□□□□□ -0.06
TFF3-203ENST00000489676 KDRP35968 1356 aa14.64□□□□□ -0.07
TFF3-203ENST00000489676 DIAPH1O60610 1272 aaKnown RBP14.64□□□□□ -0.07
TFF3-203ENST00000489676 MRS2Q9HD23 443 aa14.64□□□□□ -0.07
TFF3-203ENST00000489676 CRB1P82279 1406 aa14.64□□□□□ -0.07
TFF3-203ENST00000489676 AFF2P51816 1311 aa14.64□□□□□ -0.07
TFF3-203ENST00000489676 MEX3CQ5U5Q3 659 aaKnown RBP14.63□□□□□ -0.07
TFF3-203ENST00000489676 EYA1Q99502 592 aa14.63□□□□□ -0.07
TFF3-203ENST00000489676 ATRNO75882 1429 aa14.63□□□□□ -0.07
TFF3-203ENST00000489676 GLI3P10071 1580 aa14.62□□□□□ -0.07
TFF3-203ENST00000489676 UNC5CLQ8IV45 518 aa14.62□□□□□ -0.07
TFF3-203ENST00000489676 PNISRQ8TF01 805 aaKnown RBP14.62□□□□□ -0.07
TFF3-203ENST00000489676 LTV1Q96GA3 475 aaPredicted RBP14.62□□□□□ -0.07
TFF3-203ENST00000489676 NGLY1Q96IV0 654 aa14.62□□□□□ -0.07
TFF3-203ENST00000489676 NBPF6Q5VWK0 638 aa14.61□□□□□ -0.07
TFF3-203ENST00000489676 LARP1Q6PKG0 1096 aaKnown RBP14.61□□□□□ -0.07
TFF3-203ENST00000489676 NBPF4Q96M43 638 aa14.61□□□□□ -0.07
TFF3-203ENST00000489676 DISP2A7MBM2 1401 aa14.6□□□□□ -0.07
TFF3-203ENST00000489676 PARP4Q9UKK3 1724 aaKnown RBP14.6□□□□□ -0.07
TFF3-203ENST00000489676 THSD7AQ9UPZ6 1657 aa14.59□□□□□ -0.07
TFF3-203ENST00000489676 PKD1L3Q7Z443 1732 aa14.59□□□□□ -0.07
TFF3-203ENST00000489676 VPS72Q15906 364 aa14.59□□□□□ -0.07
TFF3-203ENST00000489676 CARD10Q9BWT7 1032 aa14.59□□□□□ -0.07
TFF3-203ENST00000489676 STRN4Q9NRL3 753 aa14.59□□□□□ -0.07
TFF3-203ENST00000489676 USP21Q9UK80 565 aa14.59□□□□□ -0.07
TFF3-203ENST00000489676 NUDCQ9Y266 331 aa14.59□□□□□ -0.07
TFF3-203ENST00000489676 MEGF6O75095 1541 aa14.59□□□□□ -0.07
TFF3-203ENST00000489676 SPATA31A1Q5TZJ5 1347 aa14.59□□□□□ -0.07
TFF3-203ENST00000489676 SPATA31A5Q5VU36 1347 aa14.59□□□□□ -0.07
TFF3-203ENST00000489676 SPATA31A7Q8IWB4 1347 aa14.59□□□□□ -0.07
TFF3-203ENST00000489676 PLEKHG2Q9H7P9 1386 aa14.59□□□□□ -0.07
TFF3-203ENST00000489676 CSB-PGBD3P0DP91 1061 aa14.58□□□□□ -0.08
TFF3-203ENST00000489676 AEBP1Q8IUX7 1158 aa14.58□□□□□ -0.08
TFF3-203ENST00000489676 SHANK3Q9BYB0 1731 aa14.58□□□□□ -0.08
TFF3-203ENST00000489676 LRRC37A3O60309 1634 aa14.57□□□□□ -0.08
TFF3-203ENST00000489676 U2SURPO15042 1029 aaKnown RBP14.57□□□□□ -0.08
TFF3-203ENST00000489676 TOM1L2Q6ZVM7 507 aa14.57□□□□□ -0.08
TFF3-203ENST00000489676 USHBP1Q8N6Y0 703 aa14.57□□□□□ -0.08
TFF3-203ENST00000489676 RSPH6AQ9H0K4 717 aa14.57□□□□□ -0.08
TFF3-203ENST00000489676 NLRP2Q9NX02 1062 aa14.57□□□□□ -0.08
TFF3-203ENST00000489676 U2AF1L5P0DN76 240 aaPredicted RBP14.56□□□□□ -0.08
TFF3-203ENST00000489676 EVA1CP58658 441 aa14.56□□□□□ -0.08
TFF3-203ENST00000489676 U2AF1Q01081 240 aaKnown RBP eCLIP14.56□□□□□ -0.08
TFF3-203ENST00000489676 ADAMTS8Q9UP79 889 aa14.56□□□□□ -0.08
TFF3-203ENST00000489676 OVOS2A0A0G2JMS6 1433 aa14.56□□□□□ -0.08
TFF3-203ENST00000489676 WDR43Q15061 677 aaKnown RBP eCLIP14.55□□□□□ -0.08
TFF3-203ENST00000489676 SULT6B1Q6IMI4 303 aa14.55□□□□□ -0.08
TFF3-203ENST00000489676 FCHSD2O94868 740 aa14.54□□□□□ -0.08
TFF3-203ENST00000489676 HMOX1P09601 288 aa14.54□□□□□ -0.08
TFF3-203ENST00000489676 PLEKHF1Q96S99 279 aa14.54□□□□□ -0.08
TFF3-203ENST00000489676 TRPC5Q9UL62 973 aaPredicted RBP14.54□□□□□ -0.08
TFF3-203ENST00000489676 ZNF772Q68DY9 489 aaPredicted RBP14.53□□□□□ -0.08
TFF3-203ENST00000489676 TCP11L2Q8N4U5 519 aa14.53□□□□□ -0.08
TFF3-203ENST00000489676 THRAP3Q9Y2W1 955 aaKnown RBP14.53□□□□□ -0.08
TFF3-203ENST00000489676 TNS2Q63HR2 1409 aa14.52□□□□□ -0.08
TFF3-203ENST00000489676 PRKAR2BP31323 418 aa14.52□□□□□ -0.09
TFF3-203ENST00000489676 BARGINQ6ZT62 677 aa14.52□□□□□ -0.09
TFF3-203ENST00000489676 GJD4Q96KN9 370 aaPredicted RBP14.51□□□□□ -0.09
TFF3-203ENST00000489676 FAM9BQ8IZU0 186 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms