RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 COL18A1P39060 1754 aa18.86■□□□□ 0.61
VPS26A-205ENST00000489656 PHLPP1O60346 1717 aa18.86■□□□□ 0.61
VPS26A-205ENST00000489656 COL22A1Q8NFW1 1626 aaPredicted RBP18.85■□□□□ 0.61
VPS26A-205ENST00000489656 PPM1GO15355 546 aaPredicted RBP18.84■□□□□ 0.61
VPS26A-205ENST00000489656 COL16A1Q07092 1604 aaPredicted RBP18.83■□□□□ 0.61
VPS26A-205ENST00000489656 IL13P35225 146 aa18.83■□□□□ 0.6
VPS26A-205ENST00000489656 GCP02774 474 aa18.82■□□□□ 0.6
VPS26A-205ENST00000489656 RGPD2P0DJD1 1756 aa18.82■□□□□ 0.6
VPS26A-205ENST00000489656 FAM208AQ9UK61 1670 aaKnown RBP18.82■□□□□ 0.6
VPS26A-205ENST00000489656 SOX12O15370 315 aa18.81■□□□□ 0.6
VPS26A-205ENST00000489656 TOM1O60784 492 aa18.81■□□□□ 0.6
VPS26A-205ENST00000489656 LMOD2Q6P5Q4 547 aa18.81■□□□□ 0.6
VPS26A-205ENST00000489656 DLG5Q8TDM6 1919 aa18.8■□□□□ 0.6
VPS26A-205ENST00000489656 CAMTA1Q9Y6Y1 1673 aa18.8■□□□□ 0.6
VPS26A-205ENST00000489656 AMPHP49418 695 aa18.8■□□□□ 0.6
VPS26A-205ENST00000489656 ARHGEF25Q86VW2 580 aa18.8■□□□□ 0.6
VPS26A-205ENST00000489656 U2AF1L5P0DN76 240 aaPredicted RBP18.79■□□□□ 0.6
VPS26A-205ENST00000489656 HOXC9P31274 260 aa18.79■□□□□ 0.6
VPS26A-205ENST00000489656 U2AF1Q01081 240 aaKnown RBP eCLIP18.79■□□□□ 0.6
VPS26A-205ENST00000489656 EIF4A2Q14240 407 aaKnown RBP18.79■□□□□ 0.6
VPS26A-205ENST00000489656 NGEFQ8N5V2 710 aa18.79■□□□□ 0.6
VPS26A-205ENST00000489656 IP6K1Q92551 441 aa18.79■□□□□ 0.6
VPS26A-205ENST00000489656 U2SURPO15042 1029 aaKnown RBP18.78■□□□□ 0.6
VPS26A-205ENST00000489656 HSP90AB2PQ58FF8 381 aa18.78■□□□□ 0.6
VPS26A-205ENST00000489656 RUNDC1Q96C34 613 aa18.78■□□□□ 0.6
VPS26A-205ENST00000489656 PNNQ9H307 717 aaKnown RBP18.78■□□□□ 0.6
VPS26A-205ENST00000489656 CPDO75976 1380 aa18.78■□□□□ 0.6
VPS26A-205ENST00000489656 FCHSD2O94868 740 aa18.77■□□□□ 0.6
VPS26A-205ENST00000489656 LMO7Q8WWI1 1683 aa18.76■□□□□ 0.59
VPS26A-205ENST00000489656 CCDC146Q8IYE0 955 aa18.75■□□□□ 0.59
VPS26A-205ENST00000489656 CERKQ8TCT0 537 aa18.75■□□□□ 0.59
VPS26A-205ENST00000489656 LRRC59Q96AG4 307 aaKnown RBP18.75■□□□□ 0.59
VPS26A-205ENST00000489656 PLEKHF1Q96S99 279 aa18.75■□□□□ 0.59
VPS26A-205ENST00000489656 KDRP35968 1356 aa18.74■□□□□ 0.59
VPS26A-205ENST00000489656 RSPH6AQ9H0K4 717 aa18.74■□□□□ 0.59
VPS26A-205ENST00000489656 IGSF1Q8N6C5 1336 aa18.73■□□□□ 0.59
VPS26A-205ENST00000489656 UBAP1LF5GYI3 381 aa18.72■□□□□ 0.59
VPS26A-205ENST00000489656 APAF1O14727 1248 aa18.72■□□□□ 0.59
VPS26A-205ENST00000489656 NCAPD2Q15021 1401 aa18.72■□□□□ 0.59
VPS26A-205ENST00000489656 ZNF521Q96K83 1311 aa18.71■□□□□ 0.59
VPS26A-205ENST00000489656 PDE3BQ13370 1112 aa18.7■□□□□ 0.58
VPS26A-205ENST00000489656 TCP11L2Q8N4U5 519 aa18.7■□□□□ 0.58
VPS26A-205ENST00000489656 CABLES1Q8TDN4 633 aa18.7■□□□□ 0.58
VPS26A-205ENST00000489656 COL14A1Q05707 1796 aaKnown RBP18.7■□□□□ 0.58
VPS26A-205ENST00000489656 CCDC27Q2M243 656 aa18.69■□□□□ 0.58
VPS26A-205ENST00000489656 MAPK8IP3Q9UPT6 1336 aa18.69■□□□□ 0.58
VPS26A-205ENST00000489656 KIAA0232Q92628 1395 aa18.68■□□□□ 0.58
VPS26A-205ENST00000489656 PRKAR2BP31323 418 aa18.68■□□□□ 0.58
VPS26A-205ENST00000489656 EYA1Q99502 592 aa18.68■□□□□ 0.58
VPS26A-205ENST00000489656 VIRMAQ69YN4 1812 aaKnown RBP18.67■□□□□ 0.58
VPS26A-205ENST00000489656 HMOX1P09601 288 aa18.67■□□□□ 0.58
VPS26A-205ENST00000489656 ZC3H6P61129 1189 aaKnown RBP18.67■□□□□ 0.58
VPS26A-205ENST00000489656 NEFMP07197 916 aa18.66■□□□□ 0.58
VPS26A-205ENST00000489656 PIP4K2BP78356 416 aa18.66■□□□□ 0.58
VPS26A-205ENST00000489656 SULT6B1Q6IMI4 303 aa18.66■□□□□ 0.58
VPS26A-205ENST00000489656 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
VPS26A-205ENST00000489656 TMPOP42166 694 aaKnown RBP18.65■□□□□ 0.58
VPS26A-205ENST00000489656 AEBP1Q8IUX7 1158 aa18.65■□□□□ 0.58
VPS26A-205ENST00000489656 AXIN2Q9Y2T1 843 aa18.65■□□□□ 0.58
VPS26A-205ENST00000489656 PLCH1Q4KWH8 1693 aa18.64■□□□□ 0.57
VPS26A-205ENST00000489656 ZBTB7CA1YPR0 619 aa18.64■□□□□ 0.57
VPS26A-205ENST00000489656 ANKRD24Q8TF21 1146 aa18.64■□□□□ 0.57
VPS26A-205ENST00000489656 ERBB3P21860 1342 aa18.64■□□□□ 0.57
VPS26A-205ENST00000489656 SENP3-EIF4A1A0A087X0R7 540 aa18.63■□□□□ 0.57
VPS26A-205ENST00000489656 SALL2Q9Y467 1007 aaPredicted RBP18.63■□□□□ 0.57
VPS26A-205ENST00000489656 NWD2Q9ULI1 1742 aa18.63■□□□□ 0.57
VPS26A-205ENST00000489656 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
VPS26A-205ENST00000489656 WWC1Q8IX03 1113 aa18.62■□□□□ 0.57
VPS26A-205ENST00000489656 LTV1Q96GA3 475 aaPredicted RBP18.62■□□□□ 0.57
VPS26A-205ENST00000489656 PHACTR3Q96KR7 559 aa18.62■□□□□ 0.57
VPS26A-205ENST00000489656 PRDM11Q9NQV5 511 aa18.62■□□□□ 0.57
VPS26A-205ENST00000489656 COL5A2P05997 1499 aaPredicted RBP18.61■□□□□ 0.57
VPS26A-205ENST00000489656 PLEKHG2Q9H7P9 1386 aa18.61■□□□□ 0.57
VPS26A-205ENST00000489656 HAP1P54257 671 aaPredicted RBP18.61■□□□□ 0.57
VPS26A-205ENST00000489656 NBPF6Q5VWK0 638 aa18.61■□□□□ 0.57
VPS26A-205ENST00000489656 NBPF4Q96M43 638 aa18.61■□□□□ 0.57
VPS26A-205ENST00000489656 PKD1L3Q7Z443 1732 aa18.6■□□□□ 0.57
VPS26A-205ENST00000489656 NRAPQ86VF7 1730 aa18.6■□□□□ 0.57
VPS26A-205ENST00000489656 PARP4Q9UKK3 1724 aaKnown RBP18.6■□□□□ 0.57
VPS26A-205ENST00000489656 GOLGA2Q08379 1002 aa18.6■□□□□ 0.57
VPS26A-205ENST00000489656 WDR63Q8IWG1 891 aa18.6■□□□□ 0.57
VPS26A-205ENST00000489656 RRP7AQ9Y3A4 280 aaKnown RBP18.6■□□□□ 0.57
VPS26A-205ENST00000489656 CHRNA2Q15822 529 aa18.59■□□□□ 0.57
VPS26A-205ENST00000489656 WNK3Q9BYP7 1800 aa18.58■□□□□ 0.57
VPS26A-205ENST00000489656 RIPK4P57078 832 aa18.58■□□□□ 0.56
VPS26A-205ENST00000489656 TRIM35Q9UPQ4 493 aa18.58■□□□□ 0.56
VPS26A-205ENST00000489656 LRRC37A3O60309 1634 aa18.58■□□□□ 0.56
VPS26A-205ENST00000489656 JCADQ9P266 1359 aa18.57■□□□□ 0.56
VPS26A-205ENST00000489656 NEUROD2Q15784 382 aa18.57■□□□□ 0.56
VPS26A-205ENST00000489656 TRMT2AQ8IZ69 625 aaKnown RBP18.57■□□□□ 0.56
VPS26A-205ENST00000489656 RNF39Q9H2S5 420 aa18.57■□□□□ 0.56
VPS26A-205ENST00000489656 SLFN5Q08AF3 891 aa18.56■□□□□ 0.56
VPS26A-205ENST00000489656 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
VPS26A-205ENST00000489656 CDCA7LQ96GN5 454 aa18.56■□□□□ 0.56
VPS26A-205ENST00000489656 IL16Q14005 1332 aa18.55■□□□□ 0.56
VPS26A-205ENST00000489656 WDR17Q8IZU2 1322 aa18.55■□□□□ 0.56
VPS26A-205ENST00000489656 E9PSI1 815 aa18.55■□□□□ 0.56
VPS26A-205ENST00000489656 ADAMTS7Q9UKP4 1686 aa18.54■□□□□ 0.56
VPS26A-205ENST00000489656 FAM83GA6ND36 823 aa18.54■□□□□ 0.56
VPS26A-205ENST00000489656 USHBP1Q8N6Y0 703 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms