RNA–Protein interactions for RNA: ENST00000489453.1

CHKB-211, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-211ENST00000489453 ROCK2O75116 1388 aaKnown RBP14.88□□□□□ -0.03
CHKB-211ENST00000489453 SOX12O15370 315 aa14.88□□□□□ -0.03
CHKB-211ENST00000489453 CPSF1Q10570 1443 aaKnown RBP14.87□□□□□ -0.03
CHKB-211ENST00000489453 CSB-PGBD3P0DP91 1061 aa14.87□□□□□ -0.03
CHKB-211ENST00000489453 KCNH5Q8NCM2 988 aa14.87□□□□□ -0.03
CHKB-211ENST00000489453 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
CHKB-211ENST00000489453 KAT6BQ8WYB5 2073 aa14.87□□□□□ -0.03
CHKB-211ENST00000489453 MON2Q7Z3U7 1717 aa14.86□□□□□ -0.03
CHKB-211ENST00000489453 WDR17Q8IZU2 1322 aa14.86□□□□□ -0.03
CHKB-211ENST00000489453 DCAF8L1A6NGE4 600 aa14.85□□□□□ -0.03
CHKB-211ENST00000489453 NEUROD1Q13562 356 aa14.85□□□□□ -0.03
CHKB-211ENST00000489453 CDCA7Q9BWT1 371 aaPredicted RBP14.85□□□□□ -0.03
CHKB-211ENST00000489453 SPON1Q9HCB6 807 aa14.85□□□□□ -0.03
CHKB-211ENST00000489453 TTC21BQ7Z4L5 1316 aa14.85□□□□□ -0.03
CHKB-211ENST00000489453 LTN1O94822 1766 aa14.84□□□□□ -0.03
CHKB-211ENST00000489453 TTC21AQ8NDW8 1320 aa14.84□□□□□ -0.03
CHKB-211ENST00000489453 KTN1Q86UP2 1357 aaKnown RBP14.84□□□□□ -0.03
CHKB-211ENST00000489453 KCNQ2O43526 872 aa14.83□□□□□ -0.04
CHKB-211ENST00000489453 BCL11BQ9C0K0 894 aaPredicted RBP14.83□□□□□ -0.04
CHKB-211ENST00000489453 ARHGEF25Q86VW2 580 aa14.82□□□□□ -0.04
CHKB-211ENST00000489453 SIN3AQ96ST3 1273 aa14.82□□□□□ -0.04
CHKB-211ENST00000489453 AXIN2Q9Y2T1 843 aa14.82□□□□□ -0.04
CHKB-211ENST00000489453 NFAT5O94916 1531 aa14.82□□□□□ -0.04
CHKB-211ENST00000489453 ABCC6O95255 1503 aa14.82□□□□□ -0.04
CHKB-211ENST00000489453 CASZ1Q86V15 1759 aa14.81□□□□□ -0.04
CHKB-211ENST00000489453 PLSCR1O15162 318 aa14.81□□□□□ -0.04
CHKB-211ENST00000489453 CARD10Q9BWT7 1032 aa14.81□□□□□ -0.04
CHKB-211ENST00000489453 CCDC7Q96M83 1385 aa14.8□□□□□ -0.04
CHKB-211ENST00000489453 NINLQ9Y2I6 1382 aa14.8□□□□□ -0.04
CHKB-211ENST00000489453 EXOC5O00471 708 aa14.79□□□□□ -0.04
CHKB-211ENST00000489453 YY1P25490 414 aa14.79□□□□□ -0.04
CHKB-211ENST00000489453 USP54Q70EL1 1684 aa14.79□□□□□ -0.04
CHKB-211ENST00000489453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.79□□□□□ -0.04
CHKB-211ENST00000489453 MARCH10Q8NA82 808 aaPredicted RBP14.79□□□□□ -0.04
CHKB-211ENST00000489453 NHSQ6T4R5 1651 aa14.78□□□□□ -0.04
CHKB-211ENST00000489453 BCL9O00512 1426 aa14.77□□□□□ -0.04
CHKB-211ENST00000489453 TNS2Q63HR2 1409 aa14.77□□□□□ -0.04
CHKB-211ENST00000489453 TMC1Q8TDI8 760 aa14.77□□□□□ -0.05
CHKB-211ENST00000489453 ANO8Q9HCE9 1232 aaPredicted RBP14.77□□□□□ -0.05
CHKB-211ENST00000489453 STK32BQ9NY57 414 aa14.77□□□□□ -0.05
CHKB-211ENST00000489453 PTF1AQ7RTS3 328 aa14.76□□□□□ -0.05
CHKB-211ENST00000489453 HDGFL2Q7Z4V5 671 aaPredicted RBP14.76□□□□□ -0.05
CHKB-211ENST00000489453 CARD11Q9BXL7 1154 aa14.76□□□□□ -0.05
CHKB-211ENST00000489453 MYOM1P52179 1685 aa14.75□□□□□ -0.05
CHKB-211ENST00000489453 NLRP2Q9NX02 1062 aa14.75□□□□□ -0.05
CHKB-211ENST00000489453 BTAF1O14981 1849 aa14.75□□□□□ -0.05
CHKB-211ENST00000489453 SBNO2Q9Y2G9 1366 aa14.74□□□□□ -0.05
CHKB-211ENST00000489453 ZBTB7AO95365 584 aa14.74□□□□□ -0.05
CHKB-211ENST00000489453 FAM208AQ9UK61 1670 aaKnown RBP14.74□□□□□ -0.05
CHKB-211ENST00000489453 USP31Q70CQ4 1352 aa14.73□□□□□ -0.05
CHKB-211ENST00000489453 TXNRD1Q16881 649 aa14.73□□□□□ -0.05
CHKB-211ENST00000489453 ERBB3P21860 1342 aa14.72□□□□□ -0.05
CHKB-211ENST00000489453 NME9Q86XW9 330 aa14.72□□□□□ -0.05
CHKB-211ENST00000489453 TERF2IPQ9NYB0 399 aa14.72□□□□□ -0.05
CHKB-211ENST00000489453 IL2RBP14784 551 aa14.71□□□□□ -0.05
CHKB-211ENST00000489453 PROM2Q8N271 834 aa14.71□□□□□ -0.05
CHKB-211ENST00000489453 ACSBG1Q96GR2 724 aa14.71□□□□□ -0.05
CHKB-211ENST00000489453 ATF5Q9Y2D1 282 aaPredicted RBP14.71□□□□□ -0.05
CHKB-211ENST00000489453 EDC4Q6P2E9 1401 aaKnown RBP14.71□□□□□ -0.05
CHKB-211ENST00000489453 TONSLQ96HA7 1378 aa14.71□□□□□ -0.06
CHKB-211ENST00000489453 CHD4Q14839 1912 aa14.7□□□□□ -0.06
CHKB-211ENST00000489453 CD163L1Q9NR16 1453 aa14.7□□□□□ -0.06
CHKB-211ENST00000489453 SLC15A2Q16348 729 aa14.7□□□□□ -0.06
CHKB-211ENST00000489453 ANKRD24Q8TF21 1146 aa14.7□□□□□ -0.06
CHKB-211ENST00000489453 PDGFDQ9GZP0 370 aaPredicted RBP14.69□□□□□ -0.06
CHKB-211ENST00000489453 SLC12A5Q9H2X9 1139 aa14.68□□□□□ -0.06
CHKB-211ENST00000489453 MTFR1LQ9H019 292 aa14.67□□□□□ -0.06
CHKB-211ENST00000489453 A0A1W2PP64 1363 aa14.67□□□□□ -0.06
CHKB-211ENST00000489453 PAPPAQ13219 1627 aa14.66□□□□□ -0.06
CHKB-211ENST00000489453 RGPD2P0DJD1 1756 aa14.66□□□□□ -0.06
CHKB-211ENST00000489453 LTV1Q96GA3 475 aaPredicted RBP14.66□□□□□ -0.06
CHKB-211ENST00000489453 QSER1Q2KHR3 1735 aa14.66□□□□□ -0.06
CHKB-211ENST00000489453 DOT1LQ8TEK3 1739 aa14.66□□□□□ -0.06
CHKB-211ENST00000489453 PTGER2P43116 358 aa14.65□□□□□ -0.06
CHKB-211ENST00000489453 DDX54Q8TDD1 881 aaKnown RBP14.64□□□□□ -0.07
CHKB-211ENST00000489453 FHDC1Q9C0D6 1143 aaPredicted RBP14.64□□□□□ -0.07
CHKB-211ENST00000489453 IP6K1Q92551 441 aa14.63□□□□□ -0.07
CHKB-211ENST00000489453 COG3Q96JB2 828 aa14.63□□□□□ -0.07
CHKB-211ENST00000489453 PUS7Q96PZ0 661 aaKnown RBP14.63□□□□□ -0.07
CHKB-211ENST00000489453 TUBGCP6Q96RT7 1819 aa14.62□□□□□ -0.07
CHKB-211ENST00000489453 AMPHP49418 695 aa14.62□□□□□ -0.07
CHKB-211ENST00000489453 ARXQ96QS3 562 aa14.62□□□□□ -0.07
CHKB-211ENST00000489453 SYT17Q9BSW7 474 aa14.62□□□□□ -0.07
CHKB-211ENST00000489453 SLC24A1O60721 1099 aa14.61□□□□□ -0.07
CHKB-211ENST00000489453 SYTL4Q96C24 671 aaPredicted RBP14.61□□□□□ -0.07
CHKB-211ENST00000489453 SHANK3Q9BYB0 1731 aa14.61□□□□□ -0.07
CHKB-211ENST00000489453 KIF20BQ96Q89 1820 aa14.6□□□□□ -0.07
CHKB-211ENST00000489453 SLC27A3Q5K4L6 730 aa14.6□□□□□ -0.07
CHKB-211ENST00000489453 LY75O60449 1722 aa14.6□□□□□ -0.07
CHKB-211ENST00000489453 ZNF827Q17R98 1081 aa14.59□□□□□ -0.07
CHKB-211ENST00000489453 KLHL34Q8N239 644 aa14.59□□□□□ -0.07
CHKB-211ENST00000489453 ST20-MTHFSA0A0A6YYL1 179 aa14.58□□□□□ -0.08
CHKB-211ENST00000489453 POLD1P28340 1107 aa14.58□□□□□ -0.08
CHKB-211ENST00000489453 HOXC9P31274 260 aa14.58□□□□□ -0.08
CHKB-211ENST00000489453 SGIP1Q9BQI5 828 aa14.58□□□□□ -0.08
CHKB-211ENST00000489453 MAP3K19Q56UN5 1328 aa14.58□□□□□ -0.08
CHKB-211ENST00000489453 SMG6Q86US8 1419 aaKnown RBP14.58□□□□□ -0.08
CHKB-211ENST00000489453 LRRC4BQ9NT99 713 aa14.57□□□□□ -0.08
CHKB-211ENST00000489453 RTL1A6NKG5 1358 aa14.57□□□□□ -0.08
CHKB-211ENST00000489453 ANKRD36BQ8N2N9 1353 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms