RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 IP6K1Q92551 441 aa27.67■■■□□ 2.02
SND1-214ENST00000489417 UBAP1LF5GYI3 381 aa27.67■■■□□ 2.02
SND1-214ENST00000489417 CERKQ8TCT0 537 aa27.67■■■□□ 2.02
SND1-214ENST00000489417 ZBTB7CA1YPR0 619 aa27.66■■■□□ 2.02
SND1-214ENST00000489417 CABLES1Q8TDN4 633 aa27.65■■■□□ 2.02
SND1-214ENST00000489417 PNNQ9H307 717 aaKnown RBP27.65■■■□□ 2.02
SND1-214ENST00000489417 FCHSD2O94868 740 aa27.64■■■□□ 2.02
SND1-214ENST00000489417 RGPD1P0DJD0 1748 aa27.64■■■□□ 2.01
SND1-214ENST00000489417 APAF1O14727 1248 aa27.63■■■□□ 2.01
SND1-214ENST00000489417 PIP4K2BP78356 416 aa27.63■■■□□ 2.01
SND1-214ENST00000489417 LRRC59Q96AG4 307 aaKnown RBP27.63■■■□□ 2.01
SND1-214ENST00000489417 SALL2Q9Y467 1007 aaPredicted RBP27.62■■■□□ 2.01
SND1-214ENST00000489417 ZC3H6P61129 1189 aaKnown RBP27.61■■■□□ 2.01
SND1-214ENST00000489417 PLEKHF1Q96S99 279 aa27.61■■■□□ 2.01
SND1-214ENST00000489417 RSPH6AQ9H0K4 717 aa27.61■■■□□ 2.01
SND1-214ENST00000489417 PHLPP1O60346 1717 aa27.61■■■□□ 2.01
SND1-214ENST00000489417 ABCA3Q99758 1704 aa27.6■■■□□ 2.01
SND1-214ENST00000489417 HMOX1P09601 288 aa27.59■■■□□ 2.01
SND1-214ENST00000489417 CPDO75976 1380 aa27.59■■■□□ 2.01
SND1-214ENST00000489417 MAPK8IP3Q9UPT6 1336 aa27.59■■■□□ 2.01
SND1-214ENST00000489417 TCP11L2Q8N4U5 519 aa27.58■■■□□ 2.01
SND1-214ENST00000489417 NGEFQ8N5V2 710 aa27.58■■■□□ 2.01
SND1-214ENST00000489417 COL16A1Q07092 1604 aaPredicted RBP27.58■■■□□ 2.01
SND1-214ENST00000489417 ABCC6O95255 1503 aa27.58■■■□□ 2.01
SND1-214ENST00000489417 PRKAR2BP31323 418 aa27.58■■■□□ 2
SND1-214ENST00000489417 LTV1Q96GA3 475 aaPredicted RBP27.57■■■□□ 2
SND1-214ENST00000489417 IGSF1Q8N6C5 1336 aa27.56■■■□□ 2
SND1-214ENST00000489417 HAP1P54257 671 aaPredicted RBP27.55■■■□□ 2
SND1-214ENST00000489417 SULT6B1Q6IMI4 303 aa27.55■■■□□ 2
SND1-214ENST00000489417 EYA1Q99502 592 aa27.55■■■□□ 2
SND1-214ENST00000489417 COL22A1Q8NFW1 1626 aaPredicted RBP27.55■■■□□ 2
SND1-214ENST00000489417 KIAA0232Q92628 1395 aa27.54■■■□□ 2
SND1-214ENST00000489417 NEFMP07197 916 aa27.54■■■□□ 2
SND1-214ENST00000489417 COL18A1P39060 1754 aa27.54■■■□□ 2
SND1-214ENST00000489417 AEBP1Q8IUX7 1158 aa27.53■■■□□ 2
SND1-214ENST00000489417 NCBP3Q53F19 620 aaKnown RBP27.52■■■□□ 2
SND1-214ENST00000489417 PDE3BQ13370 1112 aa27.51■■□□□ 1.99
SND1-214ENST00000489417 AXIN2Q9Y2T1 843 aa27.51■■□□□ 1.99
SND1-214ENST00000489417 RRP7AQ9Y3A4 280 aaKnown RBP27.51■■□□□ 1.99
SND1-214ENST00000489417 KDRP35968 1356 aa27.51■■□□□ 1.99
SND1-214ENST00000489417 ZNF521Q96K83 1311 aa27.51■■□□□ 1.99
SND1-214ENST00000489417 ANKRD24Q8TF21 1146 aa27.5■■□□□ 1.99
SND1-214ENST00000489417 TMPOP42166 694 aaKnown RBP27.49■■□□□ 1.99
SND1-214ENST00000489417 NEUROD2Q15784 382 aa27.49■■□□□ 1.99
SND1-214ENST00000489417 CHRNA2Q15822 529 aa27.49■■□□□ 1.99
SND1-214ENST00000489417 PRDM11Q9NQV5 511 aa27.49■■□□□ 1.99
SND1-214ENST00000489417 RGPD5Q99666 1765 aa27.48■■□□□ 1.99
SND1-214ENST00000489417 CCDC27Q2M243 656 aa27.47■■□□□ 1.99
SND1-214ENST00000489417 PHACTR3Q96KR7 559 aa27.47■■□□□ 1.99
SND1-214ENST00000489417 ERBB3P21860 1342 aa27.46■■□□□ 1.99
SND1-214ENST00000489417 NFE2L2Q16236 605 aa27.45■■□□□ 1.98
SND1-214ENST00000489417 NBPF6Q5VWK0 638 aa27.45■■□□□ 1.98
SND1-214ENST00000489417 NBPF4Q96M43 638 aa27.45■■□□□ 1.98
SND1-214ENST00000489417 PHF23Q9BUL5 403 aaPredicted RBP27.45■■□□□ 1.98
SND1-214ENST00000489417 LMO7Q8WWI1 1683 aa27.45■■□□□ 1.98
SND1-214ENST00000489417 WWC1Q8IX03 1113 aa27.44■■□□□ 1.98
SND1-214ENST00000489417 CAMTA1Q9Y6Y1 1673 aa27.44■■□□□ 1.98
SND1-214ENST00000489417 NCAPD2Q15021 1401 aa27.43■■□□□ 1.98
SND1-214ENST00000489417 RGPD2P0DJD1 1756 aa27.42■■□□□ 1.98
SND1-214ENST00000489417 GOLGA2Q08379 1002 aa27.42■■□□□ 1.98
SND1-214ENST00000489417 USHBP1Q8N6Y0 703 aa27.42■■□□□ 1.98
SND1-214ENST00000489417 RIPK4P57078 832 aa27.41■■□□□ 1.98
SND1-214ENST00000489417 CDCA7LQ96GN5 454 aa27.41■■□□□ 1.98
SND1-214ENST00000489417 FAM208AQ9UK61 1670 aaKnown RBP27.41■■□□□ 1.98
SND1-214ENST00000489417 TRIM35Q9UPQ4 493 aa27.39■■□□□ 1.97
SND1-214ENST00000489417 CSB-PGBD3P0DP91 1061 aa27.38■■□□□ 1.97
SND1-214ENST00000489417 WDR63Q8IWG1 891 aa27.38■■□□□ 1.97
SND1-214ENST00000489417 FAM83GA6ND36 823 aa27.36■■□□□ 1.97
SND1-214ENST00000489417 COL14A1Q05707 1796 aaKnown RBP27.36■■□□□ 1.97
SND1-214ENST00000489417 COL5A2P05997 1499 aaPredicted RBP27.36■■□□□ 1.97
SND1-214ENST00000489417 SLFN5Q08AF3 891 aa27.35■■□□□ 1.97
SND1-214ENST00000489417 NLRP2Q9NX02 1062 aa27.35■■□□□ 1.97
SND1-214ENST00000489417 JCADQ9P266 1359 aa27.35■■□□□ 1.97
SND1-214ENST00000489417 LMOD3Q0VAK6 560 aa27.34■■□□□ 1.97
SND1-214ENST00000489417 E9PSI1 815 aa27.33■■□□□ 1.97
SND1-214ENST00000489417 WDR17Q8IZU2 1322 aa27.33■■□□□ 1.97
SND1-214ENST00000489417 MTHFSDQ2M296 383 aaKnown RBP27.33■■□□□ 1.96
SND1-214ENST00000489417 GAS2L2Q8NHY3 880 aa27.33■■□□□ 1.96
SND1-214ENST00000489417 DLG5Q8TDM6 1919 aa27.32■■□□□ 1.96
SND1-214ENST00000489417 TRMT2AQ8IZ69 625 aaKnown RBP27.31■■□□□ 1.96
SND1-214ENST00000489417 SPINK5Q9NQ38 1064 aaPredicted RBP27.31■■□□□ 1.96
SND1-214ENST00000489417 DUSP27Q5VZP5 1158 aa27.3■■□□□ 1.96
SND1-214ENST00000489417 ILDR1Q86SU0 546 aaPredicted RBP27.29■■□□□ 1.96
SND1-214ENST00000489417 IL16Q14005 1332 aa27.28■■□□□ 1.96
SND1-214ENST00000489417 NUTM2BA6NNL0 878 aaPredicted RBP27.28■■□□□ 1.96
SND1-214ENST00000489417 NUTM2EB1AL46 878 aaPredicted RBP27.28■■□□□ 1.96
SND1-214ENST00000489417 NUTM2AQ8IVF1 878 aaPredicted RBP27.28■■□□□ 1.96
SND1-214ENST00000489417 ADAMTS2O95450 1211 aa27.27■■□□□ 1.96
SND1-214ENST00000489417 EVA1CP58658 441 aa27.27■■□□□ 1.96
SND1-214ENST00000489417 BTG4Q9NY30 223 aa27.27■■□□□ 1.96
SND1-214ENST00000489417 TOM1L2Q6ZVM7 507 aa27.26■■□□□ 1.95
SND1-214ENST00000489417 STRN4Q9NRL3 753 aa27.26■■□□□ 1.95
SND1-214ENST00000489417 HSPA1LP34931 641 aa27.25■■□□□ 1.95
SND1-214ENST00000489417 CALD1Q05682 793 aaKnown RBP27.25■■□□□ 1.95
SND1-214ENST00000489417 PLEKHO1Q53GL0 409 aaPredicted RBP27.25■■□□□ 1.95
SND1-214ENST00000489417 RAPGEF4Q8WZA2 1011 aa27.24■■□□□ 1.95
SND1-214ENST00000489417 PLCH1Q4KWH8 1693 aa27.24■■□□□ 1.95
SND1-214ENST00000489417 AMOTQ4VCS5 1084 aa27.24■■□□□ 1.95
SND1-214ENST00000489417 CARD10Q9BWT7 1032 aa27.24■■□□□ 1.95
SND1-214ENST00000489417 MYH16Q9H6N6 1097 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms