RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 NFAT5O94916 1531 aa19.77■□□□□ 0.76
BRCA1-218ENST00000489037 CSB-PGBD3P0DP91 1061 aa19.77■□□□□ 0.76
BRCA1-218ENST00000489037 TCP11L2Q8N4U5 519 aa19.77■□□□□ 0.76
BRCA1-218ENST00000489037 THRAP3Q9Y2W1 955 aaKnown RBP19.77■□□□□ 0.76
BRCA1-218ENST00000489037 LTN1O94822 1766 aa19.77■□□□□ 0.76
BRCA1-218ENST00000489037 MYOM1P52179 1685 aa19.76■□□□□ 0.75
BRCA1-218ENST00000489037 TOM1L2Q6ZVM7 507 aa19.76■□□□□ 0.75
BRCA1-218ENST00000489037 BARGINQ6ZT62 677 aa19.75■□□□□ 0.75
BRCA1-218ENST00000489037 CCDC125Q86Z20 511 aa19.75■□□□□ 0.75
BRCA1-218ENST00000489037 OVOS2A0A0J9YW53 1432 aa19.75■□□□□ 0.75
BRCA1-218ENST00000489037 CRB1P82279 1406 aa19.75■□□□□ 0.75
BRCA1-218ENST00000489037 OVOS2Q6IE36 1432 aa19.75■□□□□ 0.75
BRCA1-218ENST00000489037 AXIN2Q9Y2T1 843 aa19.74■□□□□ 0.75
BRCA1-218ENST00000489037 ABCC6O95255 1503 aa19.74■□□□□ 0.75
BRCA1-218ENST00000489037 KIF20BQ96Q89 1820 aa19.74■□□□□ 0.75
BRCA1-218ENST00000489037 WDR17Q8IZU2 1322 aa19.74■□□□□ 0.75
BRCA1-218ENST00000489037 FYB1O15117 783 aa19.72■□□□□ 0.75
BRCA1-218ENST00000489037 GGNBP2Q9H3C7 697 aa19.72■□□□□ 0.75
BRCA1-218ENST00000489037 THSD7AQ9UPZ6 1657 aa19.71■□□□□ 0.75
BRCA1-218ENST00000489037 PDE3BQ13370 1112 aa19.71■□□□□ 0.75
BRCA1-218ENST00000489037 SF3B2Q13435 895 aaKnown RBP19.71■□□□□ 0.75
BRCA1-218ENST00000489037 NSD3Q9BZ95 1437 aa19.7■□□□□ 0.74
BRCA1-218ENST00000489037 AMPHP49418 695 aa19.69■□□□□ 0.74
BRCA1-218ENST00000489037 CARD14Q9BXL6 1004 aa19.69■□□□□ 0.74
BRCA1-218ENST00000489037 CGNL1Q0VF96 1302 aa19.69■□□□□ 0.74
BRCA1-218ENST00000489037 CARD10Q9BWT7 1032 aa19.68■□□□□ 0.74
BRCA1-218ENST00000489037 IP6K1Q92551 441 aa19.67■□□□□ 0.74
BRCA1-218ENST00000489037 CDCA7Q9BWT1 371 aaPredicted RBP19.67■□□□□ 0.74
BRCA1-218ENST00000489037 ANKRD24Q8TF21 1146 aa19.66■□□□□ 0.74
BRCA1-218ENST00000489037 NLRP2Q9NX02 1062 aa19.66■□□□□ 0.74
BRCA1-218ENST00000489037 CCDC7Q96M83 1385 aa19.66■□□□□ 0.74
BRCA1-218ENST00000489037 BLMP54132 1417 aaPredicted RBP19.66■□□□□ 0.74
BRCA1-218ENST00000489037 PANK3Q9H999 370 aa19.65■□□□□ 0.74
BRCA1-218ENST00000489037 ERBB3P21860 1342 aa19.65■□□□□ 0.74
BRCA1-218ENST00000489037 MAP3K19Q56UN5 1328 aa19.65■□□□□ 0.74
BRCA1-218ENST00000489037 PARP4Q9UKK3 1724 aaKnown RBP19.65■□□□□ 0.74
BRCA1-218ENST00000489037 DDB1Q16531 1140 aa19.64■□□□□ 0.73
BRCA1-218ENST00000489037 FAM196AQ6ZSG2 479 aa19.64■□□□□ 0.73
BRCA1-218ENST00000489037 C11orf95C9JLR9 678 aaPredicted RBP19.63■□□□□ 0.73
BRCA1-218ENST00000489037 FAM182BQ5T319 152 aa19.63■□□□□ 0.73
BRCA1-218ENST00000489037 LTV1Q96GA3 475 aaPredicted RBP19.63■□□□□ 0.73
BRCA1-218ENST00000489037 WNK3Q9BYP7 1800 aa19.62■□□□□ 0.73
BRCA1-218ENST00000489037 FBLN1P23142 703 aa19.62■□□□□ 0.73
BRCA1-218ENST00000489037 HOXC9P31274 260 aa19.62■□□□□ 0.73
BRCA1-218ENST00000489037 RRS1Q15050 365 aaKnown RBP19.62■□□□□ 0.73
BRCA1-218ENST00000489037 RTL1A6NKG5 1358 aa19.61■□□□□ 0.73
BRCA1-218ENST00000489037 FAM208AQ9UK61 1670 aaKnown RBP19.61■□□□□ 0.73
BRCA1-218ENST00000489037 RGPD1P0DJD0 1748 aa19.6■□□□□ 0.73
BRCA1-218ENST00000489037 KIF7Q2M1P5 1343 aa19.6■□□□□ 0.73
BRCA1-218ENST00000489037 EXOC5O00471 708 aa19.6■□□□□ 0.73
BRCA1-218ENST00000489037 MAP2P11137 1827 aaKnown RBP19.6■□□□□ 0.73
BRCA1-218ENST00000489037 BAG6P46379 1132 aa19.59■□□□□ 0.73
BRCA1-218ENST00000489037 KNSTRNQ9Y448 316 aa19.59■□□□□ 0.73
BRCA1-218ENST00000489037 EP400Q96L91 3159 aa19.59■□□□□ 0.73
BRCA1-218ENST00000489037 ANKRD26Q9UPS8 1709 aa19.58■□□□□ 0.72
BRCA1-218ENST00000489037 SMG6Q86US8 1419 aaKnown RBP19.58■□□□□ 0.72
BRCA1-218ENST00000489037 KIF24Q5T7B8 1368 aa19.57■□□□□ 0.72
BRCA1-218ENST00000489037 IL2RBP14784 551 aa19.57■□□□□ 0.72
BRCA1-218ENST00000489037 LRRC37A3O60309 1634 aa19.57■□□□□ 0.72
BRCA1-218ENST00000489037 KAT6BQ8WYB5 2073 aa19.56■□□□□ 0.72
BRCA1-218ENST00000489037 NSD2O96028 1365 aa19.56■□□□□ 0.72
BRCA1-218ENST00000489037 FLT4P35916 1363 aa19.56■□□□□ 0.72
BRCA1-218ENST00000489037 OVOS2A0A0G2JMS6 1433 aa19.55■□□□□ 0.72
BRCA1-218ENST00000489037 PPM1GO15355 546 aaPredicted RBP19.55■□□□□ 0.72
BRCA1-218ENST00000489037 TRIM37O94972 964 aa19.55■□□□□ 0.72
BRCA1-218ENST00000489037 DEFB132Q7Z7B7 95 aa19.55■□□□□ 0.72
BRCA1-218ENST00000489037 DISP2A7MBM2 1401 aa19.54■□□□□ 0.72
BRCA1-218ENST00000489037 INSRP06213 1382 aa19.54■□□□□ 0.72
BRCA1-218ENST00000489037 RGPD2P0DJD1 1756 aa19.53■□□□□ 0.72
BRCA1-218ENST00000489037 TNNT2P45379 298 aaPredicted RBP19.53■□□□□ 0.72
BRCA1-218ENST00000489037 MORC1Q86VD1 984 aa19.53■□□□□ 0.72
BRCA1-218ENST00000489037 HSP90AB2PQ58FF8 381 aa19.52■□□□□ 0.72
BRCA1-218ENST00000489037 EMILIN1Q9Y6C2 1016 aa19.52■□□□□ 0.72
BRCA1-218ENST00000489037 APBA3O96018 575 aa19.51■□□□□ 0.71
BRCA1-218ENST00000489037 MARCH10Q8NA82 808 aaPredicted RBP19.5■□□□□ 0.71
BRCA1-218ENST00000489037 PEAK1Q9H792 1746 aa19.5■□□□□ 0.71
BRCA1-218ENST00000489037 TNS1Q9HBL0 1735 aaKnown RBP19.5■□□□□ 0.71
BRCA1-218ENST00000489037 TNS2Q63HR2 1409 aa19.5■□□□□ 0.71
BRCA1-218ENST00000489037 SBF2Q86WG5 1849 aa19.49■□□□□ 0.71
BRCA1-218ENST00000489037 EN1Q05925 392 aaPredicted RBP19.48■□□□□ 0.71
BRCA1-218ENST00000489037 RAPGEF4Q8WZA2 1011 aa19.48■□□□□ 0.71
BRCA1-218ENST00000489037 POLKQ9UBT6 870 aa19.48■□□□□ 0.71
BRCA1-218ENST00000489037 WASHC2AQ641Q2 1341 aa19.48■□□□□ 0.71
BRCA1-218ENST00000489037 NBPF6Q5VWK0 638 aa19.47■□□□□ 0.71
BRCA1-218ENST00000489037 NBPF4Q96M43 638 aa19.47■□□□□ 0.71
BRCA1-218ENST00000489037 BCL9O00512 1426 aa19.45■□□□□ 0.7
BRCA1-218ENST00000489037 TATP17735 454 aaPredicted RBP19.45■□□□□ 0.7
BRCA1-218ENST00000489037 BCL11BQ9C0K0 894 aaPredicted RBP19.45■□□□□ 0.7
BRCA1-218ENST00000489037 AMER1Q5JTC6 1135 aaPredicted RBP19.44■□□□□ 0.7
BRCA1-218ENST00000489037 USHBP1Q8N6Y0 703 aa19.44■□□□□ 0.7
BRCA1-218ENST00000489037 DDX54Q8TDD1 881 aaKnown RBP19.44■□□□□ 0.7
BRCA1-218ENST00000489037 PARD3Q8TEW0 1356 aa19.44■□□□□ 0.7
BRCA1-218ENST00000489037 ZCRB1Q8TBF4 217 aaKnown RBP19.43■□□□□ 0.7
BRCA1-218ENST00000489037 PER1O15534 1290 aaPredicted RBP19.42■□□□□ 0.7
BRCA1-218ENST00000489037 EZH2Q15910 746 aaKnown RBP19.42■□□□□ 0.7
BRCA1-218ENST00000489037 CC2D1BQ5T0F9 858 aaKnown RBP19.41■□□□□ 0.7
BRCA1-218ENST00000489037 CAMKK2Q96RR4 588 aa19.41■□□□□ 0.7
BRCA1-218ENST00000489037 ACSBG1Q96GR2 724 aa19.39■□□□□ 0.69
BRCA1-218ENST00000489037 MEGF6O75095 1541 aa19.39■□□□□ 0.69
BRCA1-218ENST00000489037 PLSCR1O15162 318 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms