RNA–Protein interactions for RNA: ENST00000488944.5

WDR46-238, Transcript of WD repeat domain 46, human

TSL 3

Gene WDR46, Length 538 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR46-238	ENST00000488944	PARD3	Q8TEW0	1356 aa		18.41	■□□□□ 0.54
WDR46-238	ENST00000488944	ARHGEF25	Q86VW2	580 aa		18.4	■□□□□ 0.54
WDR46-238	ENST00000488944	TTC21A	Q8NDW8	1320 aa		18.4	■□□□□ 0.54
WDR46-238	ENST00000488944	OVOS2	A0A0G2JMS6	1433 aa		18.4	■□□□□ 0.54
WDR46-238	ENST00000488944	OVOS2	A0A0J9YW53	1432 aa		18.4	■□□□□ 0.54
WDR46-238	ENST00000488944	OVOS2	Q6IE36	1432 aa		18.4	■□□□□ 0.54
WDR46-238	ENST00000488944	NFAT5	O94916	1531 aa		18.39	■□□□□ 0.54
WDR46-238	ENST00000488944	WDR17	Q8IZU2	1322 aa		18.39	■□□□□ 0.53
WDR46-238	ENST00000488944	DDB1	Q16531	1140 aa		18.38	■□□□□ 0.53
WDR46-238	ENST00000488944	KCNH5	Q8NCM2	988 aa		18.38	■□□□□ 0.53
WDR46-238	ENST00000488944	CARD11	Q9BXL7	1154 aa		18.38	■□□□□ 0.53
WDR46-238	ENST00000488944	SBNO2	Q9Y2G9	1366 aa		18.37	■□□□□ 0.53
WDR46-238	ENST00000488944	CSB-PGBD3	P0DP91	1061 aa		18.36	■□□□□ 0.53
WDR46-238	ENST00000488944	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	18.36	■□□□□ 0.53
WDR46-238	ENST00000488944	CD163L1	Q9NR16	1453 aa		18.35	■□□□□ 0.53
WDR46-238	ENST00000488944	TONSL	Q96HA7	1378 aa		18.35	■□□□□ 0.53
WDR46-238	ENST00000488944	PTF1A	Q7RTS3	328 aa		18.34	■□□□□ 0.53
WDR46-238	ENST00000488944	TMC1	Q8TDI8	760 aa		18.34	■□□□□ 0.53
WDR46-238	ENST00000488944	USP54	Q70EL1	1684 aa		18.34	■□□□□ 0.53
WDR46-238	ENST00000488944	LTN1	O94822	1766 aa		18.33	■□□□□ 0.53
WDR46-238	ENST00000488944	NME9	Q86XW9	330 aa		18.33	■□□□□ 0.52
WDR46-238	ENST00000488944	MARCH10	Q8NA82	808 aa	Predicted RBP	18.33	■□□□□ 0.52
WDR46-238	ENST00000488944	C11orf95	C9JLR9	678 aa	Predicted RBP	18.32	■□□□□ 0.52
WDR46-238	ENST00000488944	NBPF14	Q5TI25	921 aa		18.32	■□□□□ 0.52
WDR46-238	ENST00000488944	CARD10	Q9BWT7	1032 aa		18.32	■□□□□ 0.52
WDR46-238	ENST00000488944	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.32	■□□□□ 0.52
WDR46-238	ENST00000488944	RGPD4	Q7Z3J3	1758 aa		18.32	■□□□□ 0.52
WDR46-238	ENST00000488944	SLC12A5	Q9H2X9	1139 aa		18.31	■□□□□ 0.52
WDR46-238	ENST00000488944	USP31	Q70CQ4	1352 aa		18.3	■□□□□ 0.52
WDR46-238	ENST00000488944	ABCC6	O95255	1503 aa		18.3	■□□□□ 0.52
WDR46-238	ENST00000488944	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.3	■□□□□ 0.52
WDR46-238	ENST00000488944	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	18.29	■□□□□ 0.52
WDR46-238	ENST00000488944	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.28	■□□□□ 0.52
WDR46-238	ENST00000488944		A0A1W2PP64	1363 aa		18.28	■□□□□ 0.52
WDR46-238	ENST00000488944	CCDC7	Q96M83	1385 aa		18.28	■□□□□ 0.52
WDR46-238	ENST00000488944	EDC4	Q6P2E9	1401 aa	Known RBP	18.27	■□□□□ 0.52
WDR46-238	ENST00000488944	PLSCR1	O15162	318 aa		18.27	■□□□□ 0.52
WDR46-238	ENST00000488944	ANO8	Q9HCE9	1232 aa	Predicted RBP	18.27	■□□□□ 0.52
WDR46-238	ENST00000488944	TNS2	Q63HR2	1409 aa		18.26	■□□□□ 0.51
WDR46-238	ENST00000488944	EXOC5	O00471	708 aa		18.26	■□□□□ 0.51
WDR46-238	ENST00000488944	ERBB3	P21860	1342 aa		18.25	■□□□□ 0.51
WDR46-238	ENST00000488944	BCL9	O00512	1426 aa		18.25	■□□□□ 0.51
WDR46-238	ENST00000488944	NLRP2	Q9NX02	1062 aa		18.25	■□□□□ 0.51
WDR46-238	ENST00000488944	KAT6B	Q8WYB5	2073 aa		18.24	■□□□□ 0.51
WDR46-238	ENST00000488944	TERF2IP	Q9NYB0	399 aa		18.24	■□□□□ 0.51
WDR46-238	ENST00000488944	PROM2	Q8N271	834 aa		18.23	■□□□□ 0.51
WDR46-238	ENST00000488944	ANKRD24	Q8TF21	1146 aa		18.23	■□□□□ 0.51
WDR46-238	ENST00000488944	TESK2	Q96S53	571 aa		18.23	■□□□□ 0.51
WDR46-238	ENST00000488944	CASZ1	Q86V15	1759 aa		18.22	■□□□□ 0.51
WDR46-238	ENST00000488944	NHS	Q6T4R5	1651 aa		18.22	■□□□□ 0.51
WDR46-238	ENST00000488944	ST20-MTHFS	A0A0A6YYL1	179 aa		18.22	■□□□□ 0.51
WDR46-238	ENST00000488944	KCNQ2	O43526	872 aa		18.22	■□□□□ 0.51
WDR46-238	ENST00000488944	SPON1	Q9HCB6	807 aa		18.22	■□□□□ 0.51
WDR46-238	ENST00000488944	ACSBG1	Q96GR2	724 aa		18.21	■□□□□ 0.51
WDR46-238	ENST00000488944	PDGFD	Q9GZP0	370 aa	Predicted RBP	18.21	■□□□□ 0.51
WDR46-238	ENST00000488944	TXNRD1	Q16881	649 aa		18.2	■□□□□ 0.5
WDR46-238	ENST00000488944	PUS7	Q96PZ0	661 aa	Known RBP	18.2	■□□□□ 0.5
WDR46-238	ENST00000488944	PPP1R1B	Q9UD71	204 aa	Predicted RBP	18.2	■□□□□ 0.5
WDR46-238	ENST00000488944	IL2RB	P14784	551 aa		18.19	■□□□□ 0.5
WDR46-238	ENST00000488944	LTV1	Q96GA3	475 aa	Predicted RBP	18.18	■□□□□ 0.5
WDR46-238	ENST00000488944	BTAF1	O14981	1849 aa		18.18	■□□□□ 0.5
WDR46-238	ENST00000488944	RGPD2	P0DJD1	1756 aa		18.17	■□□□□ 0.5
WDR46-238	ENST00000488944	FAM208A	Q9UK61	1670 aa	Known RBP	18.16	■□□□□ 0.5
WDR46-238	ENST00000488944	FBLN1	P23142	703 aa		18.16	■□□□□ 0.5
WDR46-238	ENST00000488944	NINL	Q9Y2I6	1382 aa		18.16	■□□□□ 0.5
WDR46-238	ENST00000488944	ZBTB7A	O95365	584 aa		18.15	■□□□□ 0.5
WDR46-238	ENST00000488944	IP6K1	Q92551	441 aa		18.15	■□□□□ 0.5
WDR46-238	ENST00000488944	STK32B	Q9NY57	414 aa		18.15	■□□□□ 0.5
WDR46-238	ENST00000488944	COG3	Q96JB2	828 aa		18.14	■□□□□ 0.49
WDR46-238	ENST00000488944	MYOM1	P52179	1685 aa		18.14	■□□□□ 0.49
WDR46-238	ENST00000488944	MAP3K19	Q56UN5	1328 aa		18.14	■□□□□ 0.49
WDR46-238	ENST00000488944	TRIM26	Q12899	539 aa	Predicted RBP	18.13	■□□□□ 0.49
WDR46-238	ENST00000488944	SLC15A2	Q16348	729 aa		18.13	■□□□□ 0.49
WDR46-238	ENST00000488944	ATF5	Q9Y2D1	282 aa	Predicted RBP	18.12	■□□□□ 0.49
WDR46-238	ENST00000488944	ANKRD36B	Q8N2N9	1353 aa		18.12	■□□□□ 0.49
WDR46-238	ENST00000488944	USP47	Q96K76	1375 aa		18.12	■□□□□ 0.49
WDR46-238	ENST00000488944	PAPPA	Q13219	1627 aa		18.12	■□□□□ 0.49
WDR46-238	ENST00000488944	HOXC9	P31274	260 aa		18.11	■□□□□ 0.49
WDR46-238	ENST00000488944	AMPH	P49418	695 aa		18.11	■□□□□ 0.49
WDR46-238	ENST00000488944	DDX54	Q8TDD1	881 aa	Known RBP	18.11	■□□□□ 0.49
WDR46-238	ENST00000488944	SHANK3	Q9BYB0	1731 aa		18.09	■□□□□ 0.49
WDR46-238	ENST00000488944	PTGER2	P43116	358 aa		18.09	■□□□□ 0.49
WDR46-238	ENST00000488944	TMF1	P82094	1093 aa		18.09	■□□□□ 0.49
WDR46-238	ENST00000488944	GGNBP2	Q9H3C7	697 aa		18.09	■□□□□ 0.49
WDR46-238	ENST00000488944	DOT1L	Q8TEK3	1739 aa		18.09	■□□□□ 0.49
WDR46-238	ENST00000488944	KIF20B	Q96Q89	1820 aa		18.08	■□□□□ 0.48
WDR46-238	ENST00000488944	SLC24A1	O60721	1099 aa		18.08	■□□□□ 0.48
WDR46-238	ENST00000488944	RRS1	Q15050	365 aa	Known RBP	18.08	■□□□□ 0.48
WDR46-238	ENST00000488944	MEGF6	O75095	1541 aa		18.07	■□□□□ 0.48
WDR46-238	ENST00000488944	FYB1	O15117	783 aa		18.06	■□□□□ 0.48
WDR46-238	ENST00000488944	YY1	P25490	414 aa		18.06	■□□□□ 0.48
WDR46-238	ENST00000488944	ZNF827	Q17R98	1081 aa		18.06	■□□□□ 0.48
WDR46-238	ENST00000488944	LRRC4B	Q9NT99	713 aa		18.06	■□□□□ 0.48
WDR46-238	ENST00000488944	RTL1	A6NKG5	1358 aa		18.04	■□□□□ 0.48
WDR46-238	ENST00000488944	DCAF8L1	A6NGE4	600 aa		18.04	■□□□□ 0.48
WDR46-238	ENST00000488944	USHBP1	Q8N6Y0	703 aa		18.04	■□□□□ 0.48
WDR46-238	ENST00000488944	SYTL4	Q96C24	671 aa	Predicted RBP	18.04	■□□□□ 0.48
WDR46-238	ENST00000488944	MTFR1L	Q9H019	292 aa		18.04	■□□□□ 0.48
WDR46-238	ENST00000488944	NBPF6	Q5VWK0	638 aa		18.03	■□□□□ 0.48
WDR46-238	ENST00000488944	NBPF4	Q96M43	638 aa		18.03	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms