RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, human

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNB1-215	ENST00000488914	C6orf118	Q5T5N4	469 aa		10.49	□□□□□ -0.73
CTNNB1-215	ENST00000488914	ADAM32	Q8TC27	787 aa		10.49	□□□□□ -0.73
CTNNB1-215	ENST00000488914	SCARF1	Q14162	830 aa		10.48	□□□□□ -0.73
CTNNB1-215	ENST00000488914	CCDC116	Q8IYX3	515 aa		10.48	□□□□□ -0.73
CTNNB1-215	ENST00000488914	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.48	□□□□□ -0.73
CTNNB1-215	ENST00000488914	VEGFB	P49765	207 aa		10.47	□□□□□ -0.73
CTNNB1-215	ENST00000488914	PTK2	Q05397	1052 aa		10.47	□□□□□ -0.73
CTNNB1-215	ENST00000488914	KCTD15	Q96SI1	283 aa	Predicted RBP	10.47	□□□□□ -0.73
CTNNB1-215	ENST00000488914	TMEM259	Q4ZIN3	620 aa		10.46	□□□□□ -0.73
CTNNB1-215	ENST00000488914	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.46	□□□□□ -0.73
CTNNB1-215	ENST00000488914	MEIOB	Q8N635	442 aa		10.46	□□□□□ -0.73
CTNNB1-215	ENST00000488914	SLC10A4	Q96EP9	437 aa		10.46	□□□□□ -0.73
CTNNB1-215	ENST00000488914	CBLB	Q13191	982 aa		10.45	□□□□□ -0.74
CTNNB1-215	ENST00000488914	GJD4	Q96KN9	370 aa	Predicted RBP	10.45	□□□□□ -0.74
CTNNB1-215	ENST00000488914	NXF1	Q9UBU9	619 aa	Known RBP	10.44	□□□□□ -0.74
CTNNB1-215	ENST00000488914	GPSM3	Q9Y4H4	160 aa		10.44	□□□□□ -0.74
CTNNB1-215	ENST00000488914	EMILIN1	Q9Y6C2	1016 aa		10.44	□□□□□ -0.74
CTNNB1-215	ENST00000488914	PRKCSH	P14314	528 aa	Predicted RBP	10.43	□□□□□ -0.74
CTNNB1-215	ENST00000488914	INTS6L	Q5JSJ4	861 aa	Known RBP	10.43	□□□□□ -0.74
CTNNB1-215	ENST00000488914	LINC00528	Q8N1L1	170 aa		10.43	□□□□□ -0.74
CTNNB1-215	ENST00000488914	BMP2	P12643	396 aa		10.42	□□□□□ -0.74
CTNNB1-215	ENST00000488914	RAB15	P59190	212 aa		10.4	□□□□□ -0.74
CTNNB1-215	ENST00000488914	TMPRSS4	Q9NRS4	437 aa		10.4	□□□□□ -0.74
CTNNB1-215	ENST00000488914	PNMA1	Q8ND90	353 aa		10.39	□□□□□ -0.75
CTNNB1-215	ENST00000488914	SNRK	Q9NRH2	765 aa		10.39	□□□□□ -0.75
CTNNB1-215	ENST00000488914	CDV3	Q9UKY7	258 aa	Known RBP	10.39	□□□□□ -0.75
CTNNB1-215	ENST00000488914		Q6ZVU0	165 aa		10.38	□□□□□ -0.75
CTNNB1-215	ENST00000488914	DZIP3	Q86Y13	1208 aa	Known RBP	10.38	□□□□□ -0.75
CTNNB1-215	ENST00000488914	AGBL1	Q96MI9	1066 aa		10.38	□□□□□ -0.75
CTNNB1-215	ENST00000488914	PGPEP1	Q9NXJ5	209 aa		10.38	□□□□□ -0.75
CTNNB1-215	ENST00000488914	DNMT3L	Q9UJW3	386 aa		10.38	□□□□□ -0.75
CTNNB1-215	ENST00000488914	SOS2	Q07890	1332 aa	Predicted RBP	10.37	□□□□□ -0.75
CTNNB1-215	ENST00000488914	ERBB4	Q15303	1308 aa		10.37	□□□□□ -0.75
CTNNB1-215	ENST00000488914		H3BM21	787 aa		10.37	□□□□□ -0.75
CTNNB1-215	ENST00000488914	WIPF1	O43516	503 aa		10.37	□□□□□ -0.75
CTNNB1-215	ENST00000488914	MAN1A2	O60476	641 aa		10.37	□□□□□ -0.75
CTNNB1-215	ENST00000488914	UPP2	O95045	317 aa		10.37	□□□□□ -0.75
CTNNB1-215	ENST00000488914	MTMR14	Q8NCE2	650 aa		10.37	□□□□□ -0.75
CTNNB1-215	ENST00000488914	TSEN34	Q9BSV6	310 aa	Known RBP	10.37	□□□□□ -0.75
CTNNB1-215	ENST00000488914	GPR37L1	O60883	481 aa		10.36	□□□□□ -0.75
CTNNB1-215	ENST00000488914	FBXO45	P0C2W1	286 aa		10.36	□□□□□ -0.75
CTNNB1-215	ENST00000488914	ERVH48-1	M5A8F1	160 aa		10.35	□□□□□ -0.75
CTNNB1-215	ENST00000488914	SLC16A10	Q8TF71	515 aa		10.35	□□□□□ -0.75
CTNNB1-215	ENST00000488914	ZBBX	A8MT70	800 aa		10.34	□□□□□ -0.75
CTNNB1-215	ENST00000488914	ESPN	B1AK53	854 aa		10.34	□□□□□ -0.75
CTNNB1-215	ENST00000488914	ADD1	P35611	737 aa	Known RBP	10.34	□□□□□ -0.75
CTNNB1-215	ENST00000488914	GMPR	P36959	345 aa		10.34	□□□□□ -0.75
CTNNB1-215	ENST00000488914	DHX9	Q08211	1270 aa	Known RBP	10.34	□□□□□ -0.75
CTNNB1-215	ENST00000488914	NBPF20	Q3BBV1	942 aa		10.34	□□□□□ -0.75
CTNNB1-215	ENST00000488914	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.34	□□□□□ -0.75
CTNNB1-215	ENST00000488914	FIGNL2	A6NMB9	653 aa		10.33	□□□□□ -0.76
CTNNB1-215	ENST00000488914	RELB	Q01201	579 aa		10.33	□□□□□ -0.76
CTNNB1-215	ENST00000488914	NPAS3	Q8IXF0	933 aa		10.33	□□□□□ -0.76
CTNNB1-215	ENST00000488914	BANK1	Q8NDB2	785 aa		10.33	□□□□□ -0.76
CTNNB1-215	ENST00000488914	LILRA1	O75019	489 aa		10.32	□□□□□ -0.76
CTNNB1-215	ENST00000488914	GIGYF1	O75420	1035 aa	Predicted RBP	10.32	□□□□□ -0.76
CTNNB1-215	ENST00000488914	PCDHB9	Q9Y5E1	797 aa		10.32	□□□□□ -0.76
CTNNB1-215	ENST00000488914	TTLL8	A6PVC2	850 aa		10.31	□□□□□ -0.76
CTNNB1-215	ENST00000488914	SPINT1	O43278	529 aa		10.31	□□□□□ -0.76
CTNNB1-215	ENST00000488914	KDF1	Q8NAX2	398 aa	Predicted RBP	10.31	□□□□□ -0.76
CTNNB1-215	ENST00000488914	ZNF395	Q9H8N7	513 aa	Predicted RBP	10.31	□□□□□ -0.76
CTNNB1-215	ENST00000488914	CTSO	P43234	321 aa	Predicted RBP	10.3	□□□□□ -0.76
CTNNB1-215	ENST00000488914	IRF7	Q92985	503 aa		10.3	□□□□□ -0.76
CTNNB1-215	ENST00000488914	INSM2	Q96T92	566 aa	Predicted RBP	10.3	□□□□□ -0.76
CTNNB1-215	ENST00000488914	PPFIA3	O75145	1194 aa		10.29	□□□□□ -0.76
CTNNB1-215	ENST00000488914	CYLD	Q9NQC7	956 aa		10.29	□□□□□ -0.76
CTNNB1-215	ENST00000488914	NR1H3	Q13133	447 aa		10.27	□□□□□ -0.77
CTNNB1-215	ENST00000488914	ADH1A	P07327	375 aa		10.26	□□□□□ -0.77
CTNNB1-215	ENST00000488914	LOR	P23490	312 aa	Predicted RBP	10.26	□□□□□ -0.77
CTNNB1-215	ENST00000488914	NDUFB9	Q9Y6M9	179 aa		10.26	□□□□□ -0.77
CTNNB1-215	ENST00000488914	INSM1	Q01101	510 aa	Predicted RBP	10.25	□□□□□ -0.77
CTNNB1-215	ENST00000488914	PTS	Q03393	145 aa		10.25	□□□□□ -0.77
CTNNB1-215	ENST00000488914	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	10.25	□□□□□ -0.77	5e-6	■■□□□ 13.8
CTNNB1-215	ENST00000488914	SOCS7	O14512	581 aa		10.24	□□□□□ -0.77
CTNNB1-215	ENST00000488914	PTGIR	P43119	386 aa		10.24	□□□□□ -0.77
CTNNB1-215	ENST00000488914	SEPT12	Q8IYM1	358 aa		10.24	□□□□□ -0.77
CTNNB1-215	ENST00000488914	TBC1D2B	Q9UPU7	963 aa		10.24	□□□□□ -0.77
CTNNB1-215	ENST00000488914	VSIG8	P0DPA2	414 aa		10.23	□□□□□ -0.77
CTNNB1-215	ENST00000488914	POLM	Q9NP87	494 aa	Predicted RBP	10.23	□□□□□ -0.77
CTNNB1-215	ENST00000488914	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.22	□□□□□ -0.77
CTNNB1-215	ENST00000488914	RNF217	Q8TC41	542 aa		10.22	□□□□□ -0.77
CTNNB1-215	ENST00000488914	GPR161	Q8N6U8	529 aa	Known RBP	10.21	□□□□□ -0.77
CTNNB1-215	ENST00000488914	SCTR	P47872	440 aa		10.2	□□□□□ -0.78
CTNNB1-215	ENST00000488914	IRF5	Q13568	498 aa		10.19	□□□□□ -0.78
CTNNB1-215	ENST00000488914	CCDC155	Q8N6L0	562 aa		10.19	□□□□□ -0.78
CTNNB1-215	ENST00000488914	STK17A	Q9UEE5	414 aa		10.19	□□□□□ -0.78
CTNNB1-215	ENST00000488914	SLC35F4	A4IF30	521 aa		10.18	□□□□□ -0.78
CTNNB1-215	ENST00000488914	ERVK-9	P63128	1117 aa		10.17	□□□□□ -0.78
CTNNB1-215	ENST00000488914	PCDHB11	Q9Y5F2	797 aa		10.17	□□□□□ -0.78
CTNNB1-215	ENST00000488914	SENP3-EIF4A1	A0A087X0R7	540 aa		10.16	□□□□□ -0.78
CTNNB1-215	ENST00000488914	ATP5J2-PTCD1	G3V325	749 aa		10.16	□□□□□ -0.78
CTNNB1-215	ENST00000488914	CC2D2B	Q6DHV5	1058 aa		10.16	□□□□□ -0.78
CTNNB1-215	ENST00000488914	ZSCAN1	Q8NBB4	408 aa		10.16	□□□□□ -0.78
CTNNB1-215	ENST00000488914	CEP126	Q9P2H0	1117 aa		10.16	□□□□□ -0.78
CTNNB1-215	ENST00000488914	APBB1	O00213	710 aa		10.15	□□□□□ -0.78
CTNNB1-215	ENST00000488914	KRT76	Q01546	638 aa		10.15	□□□□□ -0.78
CTNNB1-215	ENST00000488914	TSGA10IP	Q3SY00	556 aa		10.15	□□□□□ -0.78
CTNNB1-215	ENST00000488914	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.15	□□□□□ -0.78
CTNNB1-215	ENST00000488914	CDCA7	Q9BWT1	371 aa	Predicted RBP	10.15	□□□□□ -0.78
CTNNB1-215	ENST00000488914		A0A1W2PRU2	124 aa		10.14	□□□□□ -0.79

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