RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 PLEKHF1Q96S99 279 aa14.44□□□□□ -0.1
COL21A1-211ENST00000488912 SOS2Q07890 1332 aaPredicted RBP14.44□□□□□ -0.1
COL21A1-211ENST00000488912 HOXC9P31274 260 aa14.43□□□□□ -0.1
COL21A1-211ENST00000488912 TCP11L2Q8N4U5 519 aa14.43□□□□□ -0.1
COL21A1-211ENST00000488912 RTL1A6NKG5 1358 aa14.43□□□□□ -0.1
COL21A1-211ENST00000488912 HMOX1P09601 288 aa14.43□□□□□ -0.1
COL21A1-211ENST00000488912 RSPH6AQ9H0K4 717 aa14.42□□□□□ -0.1
COL21A1-211ENST00000488912 ZNF521Q96K83 1311 aa14.42□□□□□ -0.1
COL21A1-211ENST00000488912 ARHGEF10O15013 1369 aa14.42□□□□□ -0.1
COL21A1-211ENST00000488912 FCHSD2O94868 740 aa14.42□□□□□ -0.1
COL21A1-211ENST00000488912 ANP32EQ9BTT0 268 aa14.42□□□□□ -0.1
COL21A1-211ENST00000488912 RRP7AQ9Y3A4 280 aaKnown RBP14.42□□□□□ -0.1
COL21A1-211ENST00000488912 PRKAR2BP31323 418 aa14.41□□□□□ -0.1
COL21A1-211ENST00000488912 MAPK8IP3Q9UPT6 1336 aa14.4□□□□□ -0.1
COL21A1-211ENST00000488912 ZBTB7CA1YPR0 619 aa14.4□□□□□ -0.1
COL21A1-211ENST00000488912 NEUROD2Q15784 382 aa14.4□□□□□ -0.1
COL21A1-211ENST00000488912 ARHGEF25Q86VW2 580 aa14.4□□□□□ -0.1
COL21A1-211ENST00000488912 CDCA7LQ96GN5 454 aa14.4□□□□□ -0.1
COL21A1-211ENST00000488912 RGPD5Q99666 1765 aa14.4□□□□□ -0.1
COL21A1-211ENST00000488912 PDE3BQ13370 1112 aa14.4□□□□□ -0.11
COL21A1-211ENST00000488912 CABLES1Q8TDN4 633 aa14.4□□□□□ -0.11
COL21A1-211ENST00000488912 IP6K1Q92551 441 aa14.4□□□□□ -0.11
COL21A1-211ENST00000488912 ABCA3Q99758 1704 aa14.39□□□□□ -0.11
COL21A1-211ENST00000488912 AEBP1Q8IUX7 1158 aa14.39□□□□□ -0.11
COL21A1-211ENST00000488912 NGEFQ8N5V2 710 aa14.39□□□□□ -0.11
COL21A1-211ENST00000488912 PNNQ9H307 717 aaKnown RBP14.39□□□□□ -0.11
COL21A1-211ENST00000488912 RGPD2P0DJD1 1756 aa14.38□□□□□ -0.11
COL21A1-211ENST00000488912 AHDC1Q5TGY3 1603 aaPredicted RBP14.38□□□□□ -0.11
COL21A1-211ENST00000488912 SULT6B1Q6IMI4 303 aa14.38□□□□□ -0.11
COL21A1-211ENST00000488912 DLG5Q8TDM6 1919 aa14.37□□□□□ -0.11
COL21A1-211ENST00000488912 TMPOP42166 694 aaKnown RBP14.37□□□□□ -0.11
COL21A1-211ENST00000488912 ZC3H6P61129 1189 aaKnown RBP14.37□□□□□ -0.11
COL21A1-211ENST00000488912 WWC1Q8IX03 1113 aa14.37□□□□□ -0.11
COL21A1-211ENST00000488912 LTV1Q96GA3 475 aaPredicted RBP14.37□□□□□ -0.11
COL21A1-211ENST00000488912 PHACTR3Q96KR7 559 aa14.37□□□□□ -0.11
COL21A1-211ENST00000488912 PHF23Q9BUL5 403 aaPredicted RBP14.37□□□□□ -0.11
COL21A1-211ENST00000488912 IGSF1Q8N6C5 1336 aa14.36□□□□□ -0.11
COL21A1-211ENST00000488912 EYA1Q99502 592 aa14.36□□□□□ -0.11
COL21A1-211ENST00000488912 COL18A1P39060 1754 aa14.36□□□□□ -0.11
COL21A1-211ENST00000488912 GOLGA2Q08379 1002 aa14.36□□□□□ -0.11
COL21A1-211ENST00000488912 KDRP35968 1356 aa14.36□□□□□ -0.11
COL21A1-211ENST00000488912 NEFMP07197 916 aa14.35□□□□□ -0.11
COL21A1-211ENST00000488912 CCDC27Q2M243 656 aa14.35□□□□□ -0.11
COL21A1-211ENST00000488912 NCBP3Q53F19 620 aaKnown RBP14.34□□□□□ -0.11
COL21A1-211ENST00000488912 SPINK5Q9NQ38 1064 aaPredicted RBP14.34□□□□□ -0.11
COL21A1-211ENST00000488912 AXIN2Q9Y2T1 843 aa14.34□□□□□ -0.11
COL21A1-211ENST00000488912 PHLPP1O60346 1717 aa14.34□□□□□ -0.11
COL21A1-211ENST00000488912 KIAA0232Q92628 1395 aa14.33□□□□□ -0.12
COL21A1-211ENST00000488912 RIPK4P57078 832 aa14.33□□□□□ -0.12
COL21A1-211ENST00000488912 TRIM35Q9UPQ4 493 aa14.33□□□□□ -0.12
COL21A1-211ENST00000488912 CPDO75976 1380 aa14.32□□□□□ -0.12
COL21A1-211ENST00000488912 TOM1O60784 492 aa14.32□□□□□ -0.12
COL21A1-211ENST00000488912 PRKCSHP14314 528 aaPredicted RBP14.32□□□□□ -0.12
COL21A1-211ENST00000488912 SLFN5Q08AF3 891 aa14.32□□□□□ -0.12
COL21A1-211ENST00000488912 NFE2L2Q16236 605 aa14.32□□□□□ -0.12
COL21A1-211ENST00000488912 ABCC6O95255 1503 aa14.32□□□□□ -0.12
COL21A1-211ENST00000488912 COL16A1Q07092 1604 aaPredicted RBP14.32□□□□□ -0.12
COL21A1-211ENST00000488912 DUSP27Q5VZP5 1158 aa14.32□□□□□ -0.12
COL21A1-211ENST00000488912 SUPT16HQ9Y5B9 1047 aaKnown RBP14.32□□□□□ -0.12
COL21A1-211ENST00000488912 CAMTA1Q9Y6Y1 1673 aa14.32□□□□□ -0.12
COL21A1-211ENST00000488912 PIP4K2BP78356 416 aa14.31□□□□□ -0.12
COL21A1-211ENST00000488912 USHBP1Q8N6Y0 703 aa14.31□□□□□ -0.12
COL21A1-211ENST00000488912 CHRNA2Q15822 529 aa14.31□□□□□ -0.12
COL21A1-211ENST00000488912 NBPF6Q5VWK0 638 aa14.31□□□□□ -0.12
COL21A1-211ENST00000488912 ANKRD24Q8TF21 1146 aa14.31□□□□□ -0.12
COL21A1-211ENST00000488912 LRRC59Q96AG4 307 aaKnown RBP14.31□□□□□ -0.12
COL21A1-211ENST00000488912 NBPF4Q96M43 638 aa14.31□□□□□ -0.12
COL21A1-211ENST00000488912 COL22A1Q8NFW1 1626 aaPredicted RBP14.3□□□□□ -0.12
COL21A1-211ENST00000488912 E9PSI1 815 aa14.3□□□□□ -0.12
COL21A1-211ENST00000488912 WDR63Q8IWG1 891 aa14.3□□□□□ -0.12
COL21A1-211ENST00000488912 ERBB3P21860 1342 aa14.3□□□□□ -0.12
COL21A1-211ENST00000488912 HAP1P54257 671 aaPredicted RBP14.3□□□□□ -0.12
COL21A1-211ENST00000488912 TRMT2AQ8IZ69 625 aaKnown RBP14.3□□□□□ -0.12
COL21A1-211ENST00000488912 LMO7Q8WWI1 1683 aa14.29□□□□□ -0.12
COL21A1-211ENST00000488912 UBAP1LF5GYI3 381 aa14.29□□□□□ -0.12
COL21A1-211ENST00000488912 NCAPD2Q15021 1401 aa14.29□□□□□ -0.12
COL21A1-211ENST00000488912 FAM208AQ9UK61 1670 aaKnown RBP14.28□□□□□ -0.12
COL21A1-211ENST00000488912 PRDM11Q9NQV5 511 aa14.28□□□□□ -0.12
COL21A1-211ENST00000488912 MTHFSDQ2M296 383 aaKnown RBP14.26□□□□□ -0.13
COL21A1-211ENST00000488912 CERKQ8TCT0 537 aa14.26□□□□□ -0.13
COL21A1-211ENST00000488912 THUMPD2Q9BTF0 503 aaKnown RBP14.26□□□□□ -0.13
COL21A1-211ENST00000488912 FAM83GA6ND36 823 aa14.25□□□□□ -0.13
COL21A1-211ENST00000488912 RCAN3Q9UKA8 241 aa14.25□□□□□ -0.13
COL21A1-211ENST00000488912 LMOD3Q0VAK6 560 aa14.25□□□□□ -0.13
COL21A1-211ENST00000488912 IL16Q14005 1332 aa14.24□□□□□ -0.13
COL21A1-211ENST00000488912 COL5A2P05997 1499 aaPredicted RBP14.24□□□□□ -0.13
COL21A1-211ENST00000488912 CSB-PGBD3P0DP91 1061 aa14.23□□□□□ -0.13
COL21A1-211ENST00000488912 DCTN1Q14203 1278 aa14.23□□□□□ -0.13
COL21A1-211ENST00000488912 GAS2L2Q8NHY3 880 aa14.23□□□□□ -0.13
COL21A1-211ENST00000488912 MYH16Q9H6N6 1097 aa14.23□□□□□ -0.13
COL21A1-211ENST00000488912 NLRP2Q9NX02 1062 aa14.23□□□□□ -0.13
COL21A1-211ENST00000488912 NEFLP07196 543 aa14.23□□□□□ -0.13
COL21A1-211ENST00000488912 TSR2Q969E8 191 aaKnown RBP14.23□□□□□ -0.13
COL21A1-211ENST00000488912 RNF123Q5XPI4 1314 aa14.22□□□□□ -0.13
COL21A1-211ENST00000488912 FANCIQ9NVI1 1328 aa14.22□□□□□ -0.13
COL21A1-211ENST00000488912 COL14A1Q05707 1796 aaKnown RBP14.22□□□□□ -0.13
COL21A1-211ENST00000488912 FKBP8Q14318 412 aa14.21□□□□□ -0.13
COL21A1-211ENST00000488912 IRX6P78412 446 aaPredicted RBP14.21□□□□□ -0.13
COL21A1-211ENST00000488912 MCM10Q7L590 875 aa14.21□□□□□ -0.13
COL21A1-211ENST00000488912 TSHZ2Q9NRE2 1034 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms