RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 TMC1Q8TDI8 760 aa25.93■■□□□ 1.74
ATG9A-222ENST00000488833 AXIN2Q9Y2T1 843 aa25.93■■□□□ 1.74
ATG9A-222ENST00000488833 LRP5O75197 1615 aa25.92■■□□□ 1.74
ATG9A-222ENST00000488833 WDR17Q8IZU2 1322 aa25.92■■□□□ 1.74
ATG9A-222ENST00000488833 APBA3O96018 575 aa25.92■■□□□ 1.74
ATG9A-222ENST00000488833 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.92■■□□□ 1.74
ATG9A-222ENST00000488833 USP54Q70EL1 1684 aa25.9■■□□□ 1.74
ATG9A-222ENST00000488833 CAMKK2Q96RR4 588 aa25.9■■□□□ 1.74
ATG9A-222ENST00000488833 HDGFL2Q7Z4V5 671 aaPredicted RBP25.89■■□□□ 1.74
ATG9A-222ENST00000488833 PARD3Q8TEW0 1356 aa25.89■■□□□ 1.74
ATG9A-222ENST00000488833 OVOS2A0A0G2JMS6 1433 aa25.88■■□□□ 1.73
ATG9A-222ENST00000488833 OVOS2A0A0J9YW53 1432 aa25.88■■□□□ 1.73
ATG9A-222ENST00000488833 OVOS2Q6IE36 1432 aa25.88■■□□□ 1.73
ATG9A-222ENST00000488833 ABCC6O95255 1503 aa25.88■■□□□ 1.73
ATG9A-222ENST00000488833 USP31Q70CQ4 1352 aa25.88■■□□□ 1.73
ATG9A-222ENST00000488833 PEAK1Q9H792 1746 aa25.88■■□□□ 1.73
ATG9A-222ENST00000488833 RREB1Q92766 1687 aa25.87■■□□□ 1.73
ATG9A-222ENST00000488833 CSB-PGBD3P0DP91 1061 aa25.87■■□□□ 1.73
ATG9A-222ENST00000488833 R3HDM1Q15032 1099 aaKnown RBP25.87■■□□□ 1.73
ATG9A-222ENST00000488833 NME9Q86XW9 330 aa25.87■■□□□ 1.73
ATG9A-222ENST00000488833 SLC12A5Q9H2X9 1139 aa25.87■■□□□ 1.73
ATG9A-222ENST00000488833 DDB1Q16531 1140 aa25.86■■□□□ 1.73
ATG9A-222ENST00000488833 EDC4Q6P2E9 1401 aaKnown RBP25.86■■□□□ 1.73
ATG9A-222ENST00000488833 A0A1W2PP64 1363 aa25.84■■□□□ 1.73
ATG9A-222ENST00000488833 C11orf95C9JLR9 678 aaPredicted RBP25.84■■□□□ 1.73
ATG9A-222ENST00000488833 NUP188Q5SRE5 1749 aa25.84■■□□□ 1.73
ATG9A-222ENST00000488833 TERF2IPQ9NYB0 399 aa25.84■■□□□ 1.73
ATG9A-222ENST00000488833 LTN1O94822 1766 aa25.83■■□□□ 1.73
ATG9A-222ENST00000488833 CARD10Q9BWT7 1032 aa25.83■■□□□ 1.73
ATG9A-222ENST00000488833 ST20-MTHFSA0A0A6YYL1 179 aa25.82■■□□□ 1.72
ATG9A-222ENST00000488833 PUS7Q96PZ0 661 aaKnown RBP25.82■■□□□ 1.72
ATG9A-222ENST00000488833 CDCA7Q9BWT1 371 aaPredicted RBP25.82■■□□□ 1.72
ATG9A-222ENST00000488833 SBF2Q86WG5 1849 aa25.81■■□□□ 1.72
ATG9A-222ENST00000488833 TESK2Q96S53 571 aa25.81■■□□□ 1.72
ATG9A-222ENST00000488833 CCDC7Q96M83 1385 aa25.8■■□□□ 1.72
ATG9A-222ENST00000488833 NINLQ9Y2I6 1382 aa25.79■■□□□ 1.72
ATG9A-222ENST00000488833 MARCH10Q8NA82 808 aaPredicted RBP25.76■■□□□ 1.71
ATG9A-222ENST00000488833 ERBB3P21860 1342 aa25.76■■□□□ 1.71
ATG9A-222ENST00000488833 RGPD3A6NKT7 1758 aaPredicted RBP25.76■■□□□ 1.71
ATG9A-222ENST00000488833 RGPD4Q7Z3J3 1758 aa25.76■■□□□ 1.71
ATG9A-222ENST00000488833 SLC24A1O60721 1099 aa25.74■■□□□ 1.71
ATG9A-222ENST00000488833 NBPF14Q5TI25 921 aa25.74■■□□□ 1.71
ATG9A-222ENST00000488833 TNS2Q63HR2 1409 aa25.73■■□□□ 1.71
ATG9A-222ENST00000488833 USP47Q96K76 1375 aa25.73■■□□□ 1.71
ATG9A-222ENST00000488833 NLRP2Q9NX02 1062 aa25.73■■□□□ 1.71
ATG9A-222ENST00000488833 BCL9O00512 1426 aa25.72■■□□□ 1.71
ATG9A-222ENST00000488833 EXOC5O00471 708 aa25.72■■□□□ 1.71
ATG9A-222ENST00000488833 BCL11BQ9C0K0 894 aaPredicted RBP25.71■■□□□ 1.71
ATG9A-222ENST00000488833 PTF1AQ7RTS3 328 aa25.7■■□□□ 1.7
ATG9A-222ENST00000488833 ANKRD24Q8TF21 1146 aa25.7■■□□□ 1.7
ATG9A-222ENST00000488833 ANKRD36BQ8N2N9 1353 aa25.68■■□□□ 1.7
ATG9A-222ENST00000488833 PLSCR1O15162 318 aa25.67■■□□□ 1.7
ATG9A-222ENST00000488833 TMF1P82094 1093 aa25.67■■□□□ 1.7
ATG9A-222ENST00000488833 COG3Q96JB2 828 aa25.67■■□□□ 1.7
ATG9A-222ENST00000488833 IL2RBP14784 551 aa25.65■■□□□ 1.7
ATG9A-222ENST00000488833 FAM208AQ9UK61 1670 aaKnown RBP25.64■■□□□ 1.7
ATG9A-222ENST00000488833 IP6K1Q92551 441 aa25.64■■□□□ 1.7
ATG9A-222ENST00000488833 NHSQ6T4R5 1651 aa25.63■■□□□ 1.69
ATG9A-222ENST00000488833 LTV1Q96GA3 475 aaPredicted RBP25.62■■□□□ 1.69
ATG9A-222ENST00000488833 MAP3K19Q56UN5 1328 aa25.61■■□□□ 1.69
ATG9A-222ENST00000488833 ANO8Q9HCE9 1232 aaPredicted RBP25.6■■□□□ 1.69
ATG9A-222ENST00000488833 KCNQ2O43526 872 aa25.58■■□□□ 1.69
ATG9A-222ENST00000488833 AMPHP49418 695 aa25.58■■□□□ 1.69
ATG9A-222ENST00000488833 ACSBG1Q96GR2 724 aa25.58■■□□□ 1.69
ATG9A-222ENST00000488833 FBLN1P23142 703 aa25.57■■□□□ 1.68
ATG9A-222ENST00000488833 HOXC9P31274 260 aa25.57■■□□□ 1.68
ATG9A-222ENST00000488833 CDCA8Q53HL2 280 aa25.57■■□□□ 1.68
ATG9A-222ENST00000488833 PROM2Q8N271 834 aa25.57■■□□□ 1.68
ATG9A-222ENST00000488833 PCGF6Q9BYE7 350 aa25.57■■□□□ 1.68
ATG9A-222ENST00000488833 KIF20BQ96Q89 1820 aa25.57■■□□□ 1.68
ATG9A-222ENST00000488833 KAT6BQ8WYB5 2073 aa25.57■■□□□ 1.68
ATG9A-222ENST00000488833 GGNBP2Q9H3C7 697 aa25.56■■□□□ 1.68
ATG9A-222ENST00000488833 TXNRD1Q16881 649 aa25.55■■□□□ 1.68
ATG9A-222ENST00000488833 TIMELESSQ9UNS1 1208 aa25.55■■□□□ 1.68
ATG9A-222ENST00000488833 CLSPNQ9HAW4 1339 aa25.55■■□□□ 1.68
ATG9A-222ENST00000488833 RTL1A6NKG5 1358 aa25.55■■□□□ 1.68
ATG9A-222ENST00000488833 MYOM1P52179 1685 aa25.55■■□□□ 1.68
ATG9A-222ENST00000488833 CASZ1Q86V15 1759 aa25.54■■□□□ 1.68
ATG9A-222ENST00000488833 FYB1O15117 783 aa25.54■■□□□ 1.68
ATG9A-222ENST00000488833 SPON1Q9HCB6 807 aa25.54■■□□□ 1.68
ATG9A-222ENST00000488833 RGPD2P0DJD1 1756 aa25.54■■□□□ 1.68
ATG9A-222ENST00000488833 BTAF1O14981 1849 aa25.53■■□□□ 1.68
ATG9A-222ENST00000488833 RRS1Q15050 365 aaKnown RBP25.52■■□□□ 1.68
ATG9A-222ENST00000488833 STK32BQ9NY57 414 aa25.51■■□□□ 1.67
ATG9A-222ENST00000488833 PPP1R1BQ9UD71 204 aaPredicted RBP25.5■■□□□ 1.67
ATG9A-222ENST00000488833 DDX54Q8TDD1 881 aaKnown RBP25.49■■□□□ 1.67
ATG9A-222ENST00000488833 SMG6Q86US8 1419 aaKnown RBP25.47■■□□□ 1.67
ATG9A-222ENST00000488833 NSD3Q9BZ95 1437 aa25.47■■□□□ 1.67
ATG9A-222ENST00000488833 MEGF6O75095 1541 aa25.47■■□□□ 1.67
ATG9A-222ENST00000488833 PDGFDQ9GZP0 370 aaPredicted RBP25.46■■□□□ 1.67
ATG9A-222ENST00000488833 SHANK3Q9BYB0 1731 aa25.46■■□□□ 1.67
ATG9A-222ENST00000488833 SLC15A2Q16348 729 aa25.45■■□□□ 1.66
ATG9A-222ENST00000488833 DOT1LQ8TEK3 1739 aa25.45■■□□□ 1.66
ATG9A-222ENST00000488833 PAPPAQ13219 1627 aa25.45■■□□□ 1.66
ATG9A-222ENST00000488833 ZBTB7AO95365 584 aa25.43■■□□□ 1.66
ATG9A-222ENST00000488833 CARD14Q9BXL6 1004 aa25.43■■□□□ 1.66
ATG9A-222ENST00000488833 FLT4P35916 1363 aa25.43■■□□□ 1.66
ATG9A-222ENST00000488833 NBPF6Q5VWK0 638 aa25.42■■□□□ 1.66
ATG9A-222ENST00000488833 USHBP1Q8N6Y0 703 aa25.42■■□□□ 1.66
ATG9A-222ENST00000488833 NBPF4Q96M43 638 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms