RNA–Protein interactions for RNA: ENST00000488723.1

CDK5RAP1-214, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-214ENST00000488723 VPS72Q15906 364 aa23.23■■□□□ 1.31
CDK5RAP1-214ENST00000488723 EVA1CP58658 441 aa23.22■■□□□ 1.31
CDK5RAP1-214ENST00000488723 AXIN2Q9Y2T1 843 aa23.22■■□□□ 1.31
CDK5RAP1-214ENST00000488723 ATRNO75882 1429 aa23.22■■□□□ 1.31
CDK5RAP1-214ENST00000488723 BLMP54132 1417 aaPredicted RBP23.22■■□□□ 1.31
CDK5RAP1-214ENST00000488723 AMPHP49418 695 aa23.21■■□□□ 1.31
CDK5RAP1-214ENST00000488723 CC2D1BQ5T0F9 858 aaKnown RBP23.21■■□□□ 1.31
CDK5RAP1-214ENST00000488723 MAP2P11137 1827 aaKnown RBP23.2■■□□□ 1.3
CDK5RAP1-214ENST00000488723 NRAPQ86VF7 1730 aa23.2■■□□□ 1.3
CDK5RAP1-214ENST00000488723 ZBTB7CA1YPR0 619 aa23.2■■□□□ 1.3
CDK5RAP1-214ENST00000488723 FBLN1P23142 703 aa23.2■■□□□ 1.3
CDK5RAP1-214ENST00000488723 HOXC9P31274 260 aa23.2■■□□□ 1.3
CDK5RAP1-214ENST00000488723 RRS1Q15050 365 aaKnown RBP23.2■■□□□ 1.3
CDK5RAP1-214ENST00000488723 POLKQ9UBT6 870 aa23.2■■□□□ 1.3
CDK5RAP1-214ENST00000488723 COL5A2P05997 1499 aaPredicted RBP23.19■■□□□ 1.3
CDK5RAP1-214ENST00000488723 RBM6P78332 1123 aaKnown RBP23.19■■□□□ 1.3
CDK5RAP1-214ENST00000488723 POTEAQ6S8J7 498 aa23.19■■□□□ 1.3
CDK5RAP1-214ENST00000488723 GJD4Q96KN9 370 aaPredicted RBP23.19■■□□□ 1.3
CDK5RAP1-214ENST00000488723 FLT4P35916 1363 aa23.18■■□□□ 1.3
CDK5RAP1-214ENST00000488723 RXRBP28702 533 aa23.17■■□□□ 1.3
CDK5RAP1-214ENST00000488723 SPATA31A5Q5VU36 1347 aa23.16■■□□□ 1.3
CDK5RAP1-214ENST00000488723 SPATA31A7Q8IWB4 1347 aa23.16■■□□□ 1.3
CDK5RAP1-214ENST00000488723 WDR17Q8IZU2 1322 aa23.16■■□□□ 1.3
CDK5RAP1-214ENST00000488723 TNNT2P45379 298 aaPredicted RBP23.16■■□□□ 1.3
CDK5RAP1-214ENST00000488723 INSRP06213 1382 aa23.15■■□□□ 1.3
CDK5RAP1-214ENST00000488723 ERBB3P21860 1342 aa23.15■■□□□ 1.3
CDK5RAP1-214ENST00000488723 STRN4Q9NRL3 753 aa23.15■■□□□ 1.3
CDK5RAP1-214ENST00000488723 EMILIN1Q9Y6C2 1016 aa23.15■■□□□ 1.3
CDK5RAP1-214ENST00000488723 SMG6Q86US8 1419 aaKnown RBP23.15■■□□□ 1.3
CDK5RAP1-214ENST00000488723 THRAP3Q9Y2W1 955 aaKnown RBP23.14■■□□□ 1.29
CDK5RAP1-214ENST00000488723 RGPD5Q99666 1765 aa23.14■■□□□ 1.29
CDK5RAP1-214ENST00000488723 ONECUT3O60422 494 aaPredicted RBP23.13■■□□□ 1.29
CDK5RAP1-214ENST00000488723 RALBP1Q15311 655 aa23.13■■□□□ 1.29
CDK5RAP1-214ENST00000488723 LARP1Q6PKG0 1096 aaKnown RBP23.13■■□□□ 1.29
CDK5RAP1-214ENST00000488723 CRB1P82279 1406 aa23.13■■□□□ 1.29
CDK5RAP1-214ENST00000488723 SPATA31A1Q5TZJ5 1347 aa23.12■■□□□ 1.29
CDK5RAP1-214ENST00000488723 ANKRD24Q8TF21 1146 aa23.12■■□□□ 1.29
CDK5RAP1-214ENST00000488723 CARD10Q9BWT7 1032 aa23.12■■□□□ 1.29
CDK5RAP1-214ENST00000488723 CDK12Q9NYV4 1490 aaPredicted RBP23.11■■□□□ 1.29
CDK5RAP1-214ENST00000488723 CSB-PGBD3P0DP91 1061 aa23.11■■□□□ 1.29
CDK5RAP1-214ENST00000488723 HSP90AB2PQ58FF8 381 aa23.11■■□□□ 1.29
CDK5RAP1-214ENST00000488723 TOM1L2Q6ZVM7 507 aa23.11■■□□□ 1.29
CDK5RAP1-214ENST00000488723 CCDC9Q9Y3X0 531 aaKnown RBP23.11■■□□□ 1.29
CDK5RAP1-214ENST00000488723 PARD3Q8TEW0 1356 aa23.11■■□□□ 1.29
CDK5RAP1-214ENST00000488723 PPM1GO15355 546 aaPredicted RBP23.1■■□□□ 1.29
CDK5RAP1-214ENST00000488723 BARGINQ6ZT62 677 aa23.1■■□□□ 1.29
CDK5RAP1-214ENST00000488723 PEAK1Q9H792 1746 aa23.1■■□□□ 1.29
CDK5RAP1-214ENST00000488723 TCP11L2Q8N4U5 519 aa23.09■■□□□ 1.29
CDK5RAP1-214ENST00000488723 MTHFSP49914 203 aa23.08■■□□□ 1.29
CDK5RAP1-214ENST00000488723 FAM208AQ9UK61 1670 aaKnown RBP23.08■■□□□ 1.29
CDK5RAP1-214ENST00000488723 CDCA7Q9BWT1 371 aaPredicted RBP23.07■■□□□ 1.28
CDK5RAP1-214ENST00000488723 GLI3P10071 1580 aa23.06■■□□□ 1.28
CDK5RAP1-214ENST00000488723 PPP2R1AP30153 589 aa23.06■■□□□ 1.28
CDK5RAP1-214ENST00000488723 NLRP2Q9NX02 1062 aa23.05■■□□□ 1.28
CDK5RAP1-214ENST00000488723 CNGB1Q14028 1251 aaPredicted RBP23.04■■□□□ 1.28
CDK5RAP1-214ENST00000488723 LTV1Q96GA3 475 aaPredicted RBP23.04■■□□□ 1.28
CDK5RAP1-214ENST00000488723 USP35Q9P2H5 1018 aa23.02■■□□□ 1.28
CDK5RAP1-214ENST00000488723 EIF4A2Q14240 407 aaKnown RBP23.01■■□□□ 1.27
CDK5RAP1-214ENST00000488723 FAM98CQ17RN3 349 aaKnown RBP23.01■■□□□ 1.27
CDK5RAP1-214ENST00000488723 NBPF6Q5VWK0 638 aa23.01■■□□□ 1.27
CDK5RAP1-214ENST00000488723 NBPF4Q96M43 638 aa23.01■■□□□ 1.27
CDK5RAP1-214ENST00000488723 CFAP53Q96M91 514 aa23.01■■□□□ 1.27
CDK5RAP1-214ENST00000488723 PRKRIP1Q9H875 184 aaPredicted RBP23.01■■□□□ 1.27
CDK5RAP1-214ENST00000488723 SEPT12Q8IYM1 358 aa22.99■■□□□ 1.27
CDK5RAP1-214ENST00000488723 IL13P35225 146 aa22.98■■□□□ 1.27
CDK5RAP1-214ENST00000488723 DIAPH1O60610 1272 aaKnown RBP22.97■■□□□ 1.27
CDK5RAP1-214ENST00000488723 EYA1Q99502 592 aa22.97■■□□□ 1.27
CDK5RAP1-214ENST00000488723 MYBBP1AQ9BQG0 1328 aaKnown RBP22.97■■□□□ 1.27
CDK5RAP1-214ENST00000488723 NCAPD2Q15021 1401 aa22.97■■□□□ 1.27
CDK5RAP1-214ENST00000488723 IL2RBP14784 551 aa22.96■■□□□ 1.27
CDK5RAP1-214ENST00000488723 PLEKHG2Q9H7P9 1386 aa22.96■■□□□ 1.27
CDK5RAP1-214ENST00000488723 RGS12O14924 1447 aa22.96■■□□□ 1.27
CDK5RAP1-214ENST00000488723 THSD7AQ9UPZ6 1657 aa22.96■■□□□ 1.27
CDK5RAP1-214ENST00000488723 DISP2A7MBM2 1401 aa22.95■■□□□ 1.26
CDK5RAP1-214ENST00000488723 IGSF1Q8N6C5 1336 aa22.95■■□□□ 1.26
CDK5RAP1-214ENST00000488723 ANP32CO43423 234 aa22.94■■□□□ 1.26
CDK5RAP1-214ENST00000488723 RGPD2P0DJD1 1756 aa22.94■■□□□ 1.26
CDK5RAP1-214ENST00000488723 COL3A1P02461 1466 aaPredicted RBP22.92■■□□□ 1.26
CDK5RAP1-214ENST00000488723 PARP4Q9UKK3 1724 aaKnown RBP22.92■■□□□ 1.26
CDK5RAP1-214ENST00000488723 RAPGEF4Q8WZA2 1011 aa22.92■■□□□ 1.26
CDK5RAP1-214ENST00000488723 NUDCQ9Y266 331 aa22.92■■□□□ 1.26
CDK5RAP1-214ENST00000488723 A0A0G2JS52 829 aa22.91■■□□□ 1.26
CDK5RAP1-214ENST00000488723 EXOC5O00471 708 aa22.91■■□□□ 1.26
CDK5RAP1-214ENST00000488723 MYT1Q01538 1121 aa22.91■■□□□ 1.26
CDK5RAP1-214ENST00000488723 DDB1Q16531 1140 aa22.91■■□□□ 1.26
CDK5RAP1-214ENST00000488723 ILDR2Q71H61 639 aa22.91■■□□□ 1.26
CDK5RAP1-214ENST00000488723 WNK3Q9BYP7 1800 aa22.91■■□□□ 1.26
CDK5RAP1-214ENST00000488723 KRT27Q7Z3Y8 459 aa22.9■■□□□ 1.26
CDK5RAP1-214ENST00000488723 KDRP35968 1356 aa22.89■■□□□ 1.26
CDK5RAP1-214ENST00000488723 TATP17735 454 aaPredicted RBP22.89■■□□□ 1.25
CDK5RAP1-214ENST00000488723 PDE3BQ13370 1112 aa22.89■■□□□ 1.25
CDK5RAP1-214ENST00000488723 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.89■■□□□ 1.25
CDK5RAP1-214ENST00000488723 RGPD1P0DJD0 1748 aa22.88■■□□□ 1.25
CDK5RAP1-214ENST00000488723 USHBP1Q8N6Y0 703 aa22.88■■□□□ 1.25
CDK5RAP1-214ENST00000488723 BRWD3Q6RI45 1802 aa22.87■■□□□ 1.25
CDK5RAP1-214ENST00000488723 OVOS2A0A0G2JMS6 1433 aa22.86■■□□□ 1.25
CDK5RAP1-214ENST00000488723 SULT6B1Q6IMI4 303 aa22.85■■□□□ 1.25
CDK5RAP1-214ENST00000488723 ZCRB1Q8TBF4 217 aaKnown RBP22.85■■□□□ 1.25
CDK5RAP1-214ENST00000488723 TNS2Q63HR2 1409 aa22.84■■□□□ 1.25
CDK5RAP1-214ENST00000488723 MEGF6O75095 1541 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms