RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 A0A1W2PP64 1363 aa32.57■■■□□ 2.8
CUL4A-209ENST00000488558 ZBTB7CA1YPR0 619 aa32.56■■■□□ 2.8
CUL4A-209ENST00000488558 DISP2A7MBM2 1401 aa32.55■■■□□ 2.8
CUL4A-209ENST00000488558 USP47Q96K76 1375 aa32.55■■■□□ 2.8
CUL4A-209ENST00000488558 RGPD5Q99666 1765 aa32.55■■■□□ 2.8
CUL4A-209ENST00000488558 BAG6P46379 1132 aa32.54■■■□□ 2.8
CUL4A-209ENST00000488558 FAM182BQ5T319 152 aa32.53■■■□□ 2.8
CUL4A-209ENST00000488558 FAM196AQ6ZSG2 479 aa32.53■■■□□ 2.8
CUL4A-209ENST00000488558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.53■■■□□ 2.8
CUL4A-209ENST00000488558 WDR17Q8IZU2 1322 aa32.52■■■□□ 2.8
CUL4A-209ENST00000488558 AXIN2Q9Y2T1 843 aa32.51■■■□□ 2.79
CUL4A-209ENST00000488558 LRRC37A3O60309 1634 aa32.51■■■□□ 2.79
CUL4A-209ENST00000488558 PDE3BQ13370 1112 aa32.5■■■□□ 2.79
CUL4A-209ENST00000488558 LTN1O94822 1766 aa32.5■■■□□ 2.79
CUL4A-209ENST00000488558 NME9Q86XW9 330 aa32.49■■■□□ 2.79
CUL4A-209ENST00000488558 OVOS2A0A0J9YW53 1432 aa32.49■■■□□ 2.79
CUL4A-209ENST00000488558 OVOS2Q6IE36 1432 aa32.49■■■□□ 2.79
CUL4A-209ENST00000488558 SOX12O15370 315 aa32.47■■■□□ 2.79
CUL4A-209ENST00000488558 TOM1L2Q6ZVM7 507 aa32.47■■■□□ 2.79
CUL4A-209ENST00000488558 PCGF6Q9BYE7 350 aa32.45■■■□□ 2.79
CUL4A-209ENST00000488558 PEAK1Q9H792 1746 aa32.44■■■□□ 2.78
CUL4A-209ENST00000488558 TMF1P82094 1093 aa32.44■■■□□ 2.78
CUL4A-209ENST00000488558 ANKRD36BQ8N2N9 1353 aa32.43■■■□□ 2.78
CUL4A-209ENST00000488558 C11orf95C9JLR9 678 aaPredicted RBP32.42■■■□□ 2.78
CUL4A-209ENST00000488558 CDCA7Q9BWT1 371 aaPredicted RBP32.41■■■□□ 2.78
CUL4A-209ENST00000488558 CARD10Q9BWT7 1032 aa32.41■■■□□ 2.78
CUL4A-209ENST00000488558 OVOS2A0A0G2JMS6 1433 aa32.4■■■□□ 2.78
CUL4A-209ENST00000488558 PARD3Q8TEW0 1356 aa32.39■■■□□ 2.78
CUL4A-209ENST00000488558 CCDC7Q96M83 1385 aa32.38■■■□□ 2.77
CUL4A-209ENST00000488558 TRIM37O94972 964 aa32.38■■■□□ 2.77
CUL4A-209ENST00000488558 EN1Q05925 392 aaPredicted RBP32.38■■■□□ 2.77
CUL4A-209ENST00000488558 CSB-PGBD3P0DP91 1061 aa32.37■■■□□ 2.77
CUL4A-209ENST00000488558 CDCA8Q53HL2 280 aa32.37■■■□□ 2.77
CUL4A-209ENST00000488558 DDB1Q16531 1140 aa32.36■■■□□ 2.77
CUL4A-209ENST00000488558 ERBB3P21860 1342 aa32.35■■■□□ 2.77
CUL4A-209ENST00000488558 RREB1Q92766 1687 aa32.35■■■□□ 2.77
CUL4A-209ENST00000488558 SBF2Q86WG5 1849 aa32.34■■■□□ 2.77
CUL4A-209ENST00000488558 MYOM1P52179 1685 aa32.34■■■□□ 2.77
CUL4A-209ENST00000488558 FAM208AQ9UK61 1670 aaKnown RBP32.33■■■□□ 2.77
CUL4A-209ENST00000488558 BCL9O00512 1426 aa32.32■■■□□ 2.76
CUL4A-209ENST00000488558 RGPD3A6NKT7 1758 aaPredicted RBP32.32■■■□□ 2.76
CUL4A-209ENST00000488558 RGPD4Q7Z3J3 1758 aa32.32■■■□□ 2.76
CUL4A-209ENST00000488558 CAMKK2Q96RR4 588 aa32.31■■■□□ 2.76
CUL4A-209ENST00000488558 APBA3O96018 575 aa32.3■■■□□ 2.76
CUL4A-209ENST00000488558 COG3Q96JB2 828 aa32.29■■■□□ 2.76
CUL4A-209ENST00000488558 LRP5O75197 1615 aa32.29■■■□□ 2.76
CUL4A-209ENST00000488558 EZH2Q15910 746 aaKnown RBP32.28■■■□□ 2.76
CUL4A-209ENST00000488558 KIF20BQ96Q89 1820 aa32.28■■■□□ 2.76
CUL4A-209ENST00000488558 TNS2Q63HR2 1409 aa32.27■■■□□ 2.76
CUL4A-209ENST00000488558 NUP188Q5SRE5 1749 aa32.27■■■□□ 2.76
CUL4A-209ENST00000488558 SRCAPQ6ZRS2 3230 aa32.25■■■□□ 2.75
CUL4A-209ENST00000488558 ANKRD24Q8TF21 1146 aa32.24■■■□□ 2.75
CUL4A-209ENST00000488558 IP6K1Q92551 441 aa32.24■■■□□ 2.75
CUL4A-209ENST00000488558 MARCH10Q8NA82 808 aaPredicted RBP32.22■■■□□ 2.75
CUL4A-209ENST00000488558 CCER1Q8TC90 406 aaPredicted RBP32.22■■■□□ 2.75
CUL4A-209ENST00000488558 NLRP2Q9NX02 1062 aa32.22■■■□□ 2.75
CUL4A-209ENST00000488558 RTL1A6NKG5 1358 aa32.2■■■□□ 2.75
CUL4A-209ENST00000488558 EXOC5O00471 708 aa32.2■■■□□ 2.75
CUL4A-209ENST00000488558 MAP3K19Q56UN5 1328 aa32.2■■■□□ 2.74
CUL4A-209ENST00000488558 FYB1O15117 783 aa32.19■■■□□ 2.74
CUL4A-209ENST00000488558 PSDA5PKW4 1024 aaPredicted RBP32.18■■■□□ 2.74
CUL4A-209ENST00000488558 IL2RBP14784 551 aa32.16■■■□□ 2.74
CUL4A-209ENST00000488558 BCL11BQ9C0K0 894 aaPredicted RBP32.16■■■□□ 2.74
CUL4A-209ENST00000488558 NHSQ6T4R5 1651 aa32.15■■■□□ 2.74
CUL4A-209ENST00000488558 HOXC9P31274 260 aa32.14■■■□□ 2.74
CUL4A-209ENST00000488558 PLSCR1O15162 318 aa32.13■■■□□ 2.73
CUL4A-209ENST00000488558 R3HDM1Q15032 1099 aaKnown RBP32.13■■■□□ 2.73
CUL4A-209ENST00000488558 GGNBP2Q9H3C7 697 aa32.13■■■□□ 2.73
CUL4A-209ENST00000488558 NSD3Q9BZ95 1437 aa32.12■■■□□ 2.73
CUL4A-209ENST00000488558 AMPHP49418 695 aa32.12■■■□□ 2.73
CUL4A-209ENST00000488558 KIF24Q5T7B8 1368 aa32.09■■■□□ 2.73
CUL4A-209ENST00000488558 EIF4G2P78344 907 aaKnown RBP eCLIP32.09■■■□□ 2.733e-7■■■■□ 20.7
CUL4A-209ENST00000488558 CARD14Q9BXL6 1004 aa32.09■■■□□ 2.73
CUL4A-209ENST00000488558 RGPD2P0DJD1 1756 aa32.09■■■□□ 2.73
CUL4A-209ENST00000488558 NBPF14Q5TI25 921 aa32.08■■■□□ 2.73
CUL4A-209ENST00000488558 FBLN1P23142 703 aa32.07■■■□□ 2.72
CUL4A-209ENST00000488558 LTV1Q96GA3 475 aaPredicted RBP32.06■■■□□ 2.72
CUL4A-209ENST00000488558 RRS1Q15050 365 aaKnown RBP32.05■■■□□ 2.72
CUL4A-209ENST00000488558 PTF1AQ7RTS3 328 aa32.05■■■□□ 2.72
CUL4A-209ENST00000488558 ANKRD26Q9UPS8 1709 aa32.05■■■□□ 2.72
CUL4A-209ENST00000488558 SMG6Q86US8 1419 aaKnown RBP32.04■■■□□ 2.72
CUL4A-209ENST00000488558 FLT4P35916 1363 aa32.03■■■□□ 2.72
CUL4A-209ENST00000488558 INSRP06213 1382 aa32.02■■■□□ 2.72
CUL4A-209ENST00000488558 HSPA5P11021 654 aaKnown RBP32.01■■■□□ 2.71
CUL4A-209ENST00000488558 SHANK3Q9BYB0 1731 aa32■■■□□ 2.71
CUL4A-209ENST00000488558 CGNL1Q0VF96 1302 aa32■■■□□ 2.71
CUL4A-209ENST00000488558 BTAF1O14981 1849 aa31.98■■■□□ 2.71
CUL4A-209ENST00000488558 MEGF6O75095 1541 aa31.97■■■□□ 2.71
CUL4A-209ENST00000488558 KCNQ2O43526 872 aa31.95■■■□□ 2.71
CUL4A-209ENST00000488558 PROM2Q8N271 834 aa31.94■■■□□ 2.7
CUL4A-209ENST00000488558 NBPF6Q5VWK0 638 aa31.93■■■□□ 2.7
CUL4A-209ENST00000488558 NBPF4Q96M43 638 aa31.93■■■□□ 2.7
CUL4A-209ENST00000488558 HSP90AB2PQ58FF8 381 aa31.92■■■□□ 2.7
CUL4A-209ENST00000488558 ACSBG1Q96GR2 724 aa31.92■■■□□ 2.7
CUL4A-209ENST00000488558 DOT1LQ8TEK3 1739 aa31.92■■■□□ 2.7
CUL4A-209ENST00000488558 CASZ1Q86V15 1759 aa31.91■■■□□ 2.7
CUL4A-209ENST00000488558 TXNRD1Q16881 649 aa31.91■■■□□ 2.7
CUL4A-209ENST00000488558 POLR3GLQ9BT43 218 aa31.91■■■□□ 2.7
CUL4A-209ENST00000488558 MAP2P11137 1827 aaKnown RBP31.91■■■□□ 2.7
CUL4A-209ENST00000488558 ANO8Q9HCE9 1232 aaPredicted RBP31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms