RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 OVOS2Q6IE36 1432 aa24.88■■□□□ 1.57
ITGB1-215ENST00000488494 ARHGEF25Q86VW2 580 aa24.88■■□□□ 1.57
ITGB1-215ENST00000488494 BARGINQ6ZT62 677 aa24.87■■□□□ 1.57
ITGB1-215ENST00000488494 TCP11L2Q8N4U5 519 aa24.87■■□□□ 1.57
ITGB1-215ENST00000488494 ANKRD36BQ8N2N9 1353 aa24.86■■□□□ 1.57
ITGB1-215ENST00000488494 LTN1O94822 1766 aa24.85■■□□□ 1.57
ITGB1-215ENST00000488494 RGPD5Q99666 1765 aa24.85■■□□□ 1.57
ITGB1-215ENST00000488494 MYOM1P52179 1685 aa24.85■■□□□ 1.57
ITGB1-215ENST00000488494 WNK3Q9BYP7 1800 aa24.85■■□□□ 1.57
ITGB1-215ENST00000488494 FAM182BQ5T319 152 aa24.85■■□□□ 1.57
ITGB1-215ENST00000488494 AXIN2Q9Y2T1 843 aa24.85■■□□□ 1.57
ITGB1-215ENST00000488494 PARP4Q9UKK3 1724 aaKnown RBP24.84■■□□□ 1.57
ITGB1-215ENST00000488494 RGPD1P0DJD0 1748 aa24.83■■□□□ 1.57
ITGB1-215ENST00000488494 WDR17Q8IZU2 1322 aa24.83■■□□□ 1.56
ITGB1-215ENST00000488494 LRRC37A3O60309 1634 aa24.83■■□□□ 1.56
ITGB1-215ENST00000488494 SF3B2Q13435 895 aaKnown RBP24.82■■□□□ 1.56
ITGB1-215ENST00000488494 THRAP3Q9Y2W1 955 aaKnown RBP24.82■■□□□ 1.56
ITGB1-215ENST00000488494 CDCA8Q53HL2 280 aa24.81■■□□□ 1.56
ITGB1-215ENST00000488494 TNS1Q9HBL0 1735 aaKnown RBP24.81■■□□□ 1.56
ITGB1-215ENST00000488494 TOM1L2Q6ZVM7 507 aa24.8■■□□□ 1.56
ITGB1-215ENST00000488494 DEFB132Q7Z7B7 95 aa24.79■■□□□ 1.56
ITGB1-215ENST00000488494 CSB-PGBD3P0DP91 1061 aa24.78■■□□□ 1.56
ITGB1-215ENST00000488494 PDE3BQ13370 1112 aa24.76■■□□□ 1.55
ITGB1-215ENST00000488494 KIF20BQ96Q89 1820 aa24.76■■□□□ 1.55
ITGB1-215ENST00000488494 COG3Q96JB2 828 aa24.74■■□□□ 1.55
ITGB1-215ENST00000488494 ERBB3P21860 1342 aa24.73■■□□□ 1.55
ITGB1-215ENST00000488494 FAM196AQ6ZSG2 479 aa24.73■■□□□ 1.55
ITGB1-215ENST00000488494 BAG6P46379 1132 aa24.72■■□□□ 1.55
ITGB1-215ENST00000488494 CARD10Q9BWT7 1032 aa24.72■■□□□ 1.55
ITGB1-215ENST00000488494 DISP2A7MBM2 1401 aa24.71■■□□□ 1.55
ITGB1-215ENST00000488494 PEAK1Q9H792 1746 aa24.71■■□□□ 1.55
ITGB1-215ENST00000488494 CCDC7Q96M83 1385 aa24.7■■□□□ 1.55
ITGB1-215ENST00000488494 EIF4G2P78344 907 aaKnown RBP eCLIP24.7■■□□□ 1.54
ITGB1-215ENST00000488494 OVOS2A0A0G2JMS6 1433 aa24.69■■□□□ 1.54
ITGB1-215ENST00000488494 NSD3Q9BZ95 1437 aa24.69■■□□□ 1.54
ITGB1-215ENST00000488494 TRIM37O94972 964 aa24.69■■□□□ 1.54
ITGB1-215ENST00000488494 HSPA5P11021 654 aaKnown RBP24.69■■□□□ 1.54
ITGB1-215ENST00000488494 DDB1Q16531 1140 aa24.68■■□□□ 1.54
ITGB1-215ENST00000488494 ANKRD24Q8TF21 1146 aa24.68■■□□□ 1.54
ITGB1-215ENST00000488494 GGNBP2Q9H3C7 697 aa24.68■■□□□ 1.54
ITGB1-215ENST00000488494 FAM208AQ9UK61 1670 aaKnown RBP24.68■■□□□ 1.54
ITGB1-215ENST00000488494 MAP3K19Q56UN5 1328 aa24.66■■□□□ 1.54
ITGB1-215ENST00000488494 FYB1O15117 783 aa24.66■■□□□ 1.54
ITGB1-215ENST00000488494 POLR3GLQ9BT43 218 aa24.66■■□□□ 1.54
ITGB1-215ENST00000488494 CDCA7Q9BWT1 371 aaPredicted RBP24.66■■□□□ 1.54
ITGB1-215ENST00000488494 NLRP2Q9NX02 1062 aa24.66■■□□□ 1.54
ITGB1-215ENST00000488494 TNS2Q63HR2 1409 aa24.66■■□□□ 1.54
ITGB1-215ENST00000488494 EN1Q05925 392 aaPredicted RBP24.64■■□□□ 1.54
ITGB1-215ENST00000488494 IP6K1Q92551 441 aa24.64■■□□□ 1.54
ITGB1-215ENST00000488494 CARD14Q9BXL6 1004 aa24.64■■□□□ 1.54
ITGB1-215ENST00000488494 SRCAPQ6ZRS2 3230 aa24.63■■□□□ 1.53
ITGB1-215ENST00000488494 FBLN1P23142 703 aa24.63■■□□□ 1.53
ITGB1-215ENST00000488494 RTL1A6NKG5 1358 aa24.63■■□□□ 1.53
ITGB1-215ENST00000488494 HOXC9P31274 260 aa24.61■■□□□ 1.53
ITGB1-215ENST00000488494 LTV1Q96GA3 475 aaPredicted RBP24.61■■□□□ 1.53
ITGB1-215ENST00000488494 AMPHP49418 695 aa24.6■■□□□ 1.53
ITGB1-215ENST00000488494 RRS1Q15050 365 aaKnown RBP24.6■■□□□ 1.53
ITGB1-215ENST00000488494 SBF2Q86WG5 1849 aa24.59■■□□□ 1.53
ITGB1-215ENST00000488494 APBA3O96018 575 aa24.59■■□□□ 1.53
ITGB1-215ENST00000488494 MARCH10Q8NA82 808 aaPredicted RBP24.59■■□□□ 1.53
ITGB1-215ENST00000488494 RREB1Q92766 1687 aa24.59■■□□□ 1.53
ITGB1-215ENST00000488494 C11orf95C9JLR9 678 aaPredicted RBP24.58■■□□□ 1.53
ITGB1-215ENST00000488494 EZH2Q15910 746 aaKnown RBP24.57■■□□□ 1.52
ITGB1-215ENST00000488494 PARD3Q8TEW0 1356 aa24.56■■□□□ 1.52
ITGB1-215ENST00000488494 BCL9O00512 1426 aa24.56■■□□□ 1.52
ITGB1-215ENST00000488494 IL2RBP14784 551 aa24.56■■□□□ 1.52
ITGB1-215ENST00000488494 CGNL1Q0VF96 1302 aa24.56■■□□□ 1.52
ITGB1-215ENST00000488494 EXOC5O00471 708 aa24.55■■□□□ 1.52
ITGB1-215ENST00000488494 CAMKK2Q96RR4 588 aa24.55■■□□□ 1.52
ITGB1-215ENST00000488494 NUP188Q5SRE5 1749 aa24.55■■□□□ 1.52
ITGB1-215ENST00000488494 ANKRD26Q9UPS8 1709 aa24.55■■□□□ 1.52
ITGB1-215ENST00000488494 RGPD2P0DJD1 1756 aa24.54■■□□□ 1.52
ITGB1-215ENST00000488494 SMG6Q86US8 1419 aaKnown RBP24.54■■□□□ 1.52
ITGB1-215ENST00000488494 RGPD3A6NKT7 1758 aaPredicted RBP24.54■■□□□ 1.52
ITGB1-215ENST00000488494 RGPD4Q7Z3J3 1758 aa24.54■■□□□ 1.52
ITGB1-215ENST00000488494 FLT4P35916 1363 aa24.53■■□□□ 1.52
ITGB1-215ENST00000488494 NHSQ6T4R5 1651 aa24.51■■□□□ 1.51
ITGB1-215ENST00000488494 PSDA5PKW4 1024 aaPredicted RBP24.51■■□□□ 1.51
ITGB1-215ENST00000488494 KIF24Q5T7B8 1368 aa24.5■■□□□ 1.51
ITGB1-215ENST00000488494 PTF1AQ7RTS3 328 aa24.49■■□□□ 1.51
ITGB1-215ENST00000488494 INSRP06213 1382 aa24.49■■□□□ 1.51
ITGB1-215ENST00000488494 MEGF6O75095 1541 aa24.49■■□□□ 1.51
ITGB1-215ENST00000488494 BCL11BQ9C0K0 894 aaPredicted RBP24.48■■□□□ 1.51
ITGB1-215ENST00000488494 EMILIN1Q9Y6C2 1016 aa24.48■■□□□ 1.51
ITGB1-215ENST00000488494 PANK3Q9H999 370 aa24.47■■□□□ 1.51
ITGB1-215ENST00000488494 HSP90AB2PQ58FF8 381 aa24.46■■□□□ 1.51
ITGB1-215ENST00000488494 SHANK3Q9BYB0 1731 aa24.46■■□□□ 1.51
ITGB1-215ENST00000488494 USHBP1Q8N6Y0 703 aa24.45■■□□□ 1.5
ITGB1-215ENST00000488494 LRP5O75197 1615 aa24.44■■□□□ 1.5
ITGB1-215ENST00000488494 R3HDM1Q15032 1099 aaKnown RBP24.44■■□□□ 1.5
ITGB1-215ENST00000488494 NBPF6Q5VWK0 638 aa24.44■■□□□ 1.5
ITGB1-215ENST00000488494 NBPF4Q96M43 638 aa24.44■■□□□ 1.5
ITGB1-215ENST00000488494 KIF7Q2M1P5 1343 aa24.43■■□□□ 1.5
ITGB1-215ENST00000488494 PPM1GO15355 546 aaPredicted RBP24.43■■□□□ 1.5
ITGB1-215ENST00000488494 NSD2O96028 1365 aa24.42■■□□□ 1.5
ITGB1-215ENST00000488494 TNNT2P45379 298 aaPredicted RBP24.41■■□□□ 1.5
ITGB1-215ENST00000488494 ACSBG1Q96GR2 724 aa24.41■■□□□ 1.5
ITGB1-215ENST00000488494 KCNQ2O43526 872 aa24.4■■□□□ 1.5
ITGB1-215ENST00000488494 DOT1LQ8TEK3 1739 aa24.4■■□□□ 1.5
ITGB1-215ENST00000488494 MAP2P11137 1827 aaKnown RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms