RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 SRCAPQ6ZRS2 3230 aa19.84■□□□□ 0.77
COL9A2-208ENST00000488463 SOX12O15370 315 aa19.83■□□□□ 0.77
COL9A2-208ENST00000488463 CARD14Q9BXL6 1004 aa19.83■□□□□ 0.77
COL9A2-208ENST00000488463 EVA1CP58658 441 aa19.82■□□□□ 0.76
COL9A2-208ENST00000488463 CRB1P82279 1406 aa19.82■□□□□ 0.76
COL9A2-208ENST00000488463 ZBTB7CA1YPR0 619 aa19.81■□□□□ 0.76
COL9A2-208ENST00000488463 FYB1O15117 783 aa19.81■□□□□ 0.76
COL9A2-208ENST00000488463 BARGINQ6ZT62 677 aa19.81■□□□□ 0.76
COL9A2-208ENST00000488463 C11orf95C9JLR9 678 aaPredicted RBP19.8■□□□□ 0.76
COL9A2-208ENST00000488463 KRT27Q7Z3Y8 459 aa19.8■□□□□ 0.76
COL9A2-208ENST00000488463 KIF20BQ96Q89 1820 aa19.8■□□□□ 0.76
COL9A2-208ENST00000488463 WDR17Q8IZU2 1322 aa19.79■□□□□ 0.76
COL9A2-208ENST00000488463 TCP11L2Q8N4U5 519 aa19.79■□□□□ 0.76
COL9A2-208ENST00000488463 PARP4Q9UKK3 1724 aaKnown RBP19.79■□□□□ 0.76
COL9A2-208ENST00000488463 WNK3Q9BYP7 1800 aa19.79■□□□□ 0.76
COL9A2-208ENST00000488463 USP35Q9P2H5 1018 aa19.78■□□□□ 0.76
COL9A2-208ENST00000488463 THRAP3Q9Y2W1 955 aaKnown RBP19.77■□□□□ 0.76
COL9A2-208ENST00000488463 NSD3Q9BZ95 1437 aa19.76■□□□□ 0.75
COL9A2-208ENST00000488463 COG3Q96JB2 828 aa19.76■□□□□ 0.75
COL9A2-208ENST00000488463 FBLN1P23142 703 aa19.75■□□□□ 0.75
COL9A2-208ENST00000488463 GGNBP2Q9H3C7 697 aa19.75■□□□□ 0.75
COL9A2-208ENST00000488463 A0A0G2JS52 829 aa19.74■□□□□ 0.75
COL9A2-208ENST00000488463 MYT1Q01538 1121 aa19.74■□□□□ 0.75
COL9A2-208ENST00000488463 DISP2A7MBM2 1401 aa19.74■□□□□ 0.75
COL9A2-208ENST00000488463 BLMP54132 1417 aaPredicted RBP19.74■□□□□ 0.75
COL9A2-208ENST00000488463 ERBB3P21860 1342 aa19.74■□□□□ 0.75
COL9A2-208ENST00000488463 LRRC37A3O60309 1634 aa19.73■□□□□ 0.75
COL9A2-208ENST00000488463 FAM182BQ5T319 152 aa19.73■□□□□ 0.75
COL9A2-208ENST00000488463 TOM1L2Q6ZVM7 507 aa19.73■□□□□ 0.75
COL9A2-208ENST00000488463 CCDC125Q86Z20 511 aa19.73■□□□□ 0.75
COL9A2-208ENST00000488463 CARD10Q9BWT7 1032 aa19.73■□□□□ 0.75
COL9A2-208ENST00000488463 MAP3K19Q56UN5 1328 aa19.73■□□□□ 0.75
COL9A2-208ENST00000488463 IP6K1Q92551 441 aa19.72■□□□□ 0.75
COL9A2-208ENST00000488463 PEAK1Q9H792 1746 aa19.71■□□□□ 0.75
COL9A2-208ENST00000488463 TNS1Q9HBL0 1735 aaKnown RBP19.69■□□□□ 0.74
COL9A2-208ENST00000488463 ANKRD26Q9UPS8 1709 aa19.68■□□□□ 0.74
COL9A2-208ENST00000488463 HOXC9P31274 260 aa19.68■□□□□ 0.74
COL9A2-208ENST00000488463 ANKRD24Q8TF21 1146 aa19.68■□□□□ 0.74
COL9A2-208ENST00000488463 POLR3GLQ9BT43 218 aa19.68■□□□□ 0.74
COL9A2-208ENST00000488463 KIF7Q2M1P5 1343 aa19.68■□□□□ 0.74
COL9A2-208ENST00000488463 FAM208AQ9UK61 1670 aaKnown RBP19.68■□□□□ 0.74
COL9A2-208ENST00000488463 CCDC7Q96M83 1385 aa19.68■□□□□ 0.74
COL9A2-208ENST00000488463 RGPD1P0DJD0 1748 aa19.68■□□□□ 0.74
COL9A2-208ENST00000488463 CSB-PGBD3P0DP91 1061 aa19.67■□□□□ 0.74
COL9A2-208ENST00000488463 RRS1Q15050 365 aaKnown RBP19.67■□□□□ 0.74
COL9A2-208ENST00000488463 PANK3Q9H999 370 aa19.67■□□□□ 0.74
COL9A2-208ENST00000488463 RTL1A6NKG5 1358 aa19.67■□□□□ 0.74
COL9A2-208ENST00000488463 RGPD2P0DJD1 1756 aa19.66■□□□□ 0.74
COL9A2-208ENST00000488463 CGNL1Q0VF96 1302 aa19.65■□□□□ 0.74
COL9A2-208ENST00000488463 PDE3BQ13370 1112 aa19.64■□□□□ 0.73
COL9A2-208ENST00000488463 FAM196AQ6ZSG2 479 aa19.64■□□□□ 0.73
COL9A2-208ENST00000488463 DEFB132Q7Z7B7 95 aa19.64■□□□□ 0.73
COL9A2-208ENST00000488463 CDCA7Q9BWT1 371 aaPredicted RBP19.64■□□□□ 0.73
COL9A2-208ENST00000488463 MAP2P11137 1827 aaKnown RBP19.63■□□□□ 0.73
COL9A2-208ENST00000488463 SBF2Q86WG5 1849 aa19.63■□□□□ 0.73
COL9A2-208ENST00000488463 NLRP2Q9NX02 1062 aa19.63■□□□□ 0.73
COL9A2-208ENST00000488463 KIF24Q5T7B8 1368 aa19.62■□□□□ 0.73
COL9A2-208ENST00000488463 AMPHP49418 695 aa19.62■□□□□ 0.73
COL9A2-208ENST00000488463 DDB1Q16531 1140 aa19.62■□□□□ 0.73
COL9A2-208ENST00000488463 MARCH10Q8NA82 808 aaPredicted RBP19.61■□□□□ 0.73
COL9A2-208ENST00000488463 BCL9O00512 1426 aa19.6■□□□□ 0.73
COL9A2-208ENST00000488463 TNS2Q63HR2 1409 aa19.6■□□□□ 0.73
COL9A2-208ENST00000488463 EMILIN1Q9Y6C2 1016 aa19.6■□□□□ 0.73
COL9A2-208ENST00000488463 OVOS2A0A0G2JMS6 1433 aa19.59■□□□□ 0.73
COL9A2-208ENST00000488463 INSRP06213 1382 aa19.59■□□□□ 0.73
COL9A2-208ENST00000488463 FLT4P35916 1363 aa19.59■□□□□ 0.73
COL9A2-208ENST00000488463 HSP90AB2PQ58FF8 381 aa19.59■□□□□ 0.73
COL9A2-208ENST00000488463 LTV1Q96GA3 475 aaPredicted RBP19.59■□□□□ 0.73
COL9A2-208ENST00000488463 WASHC2AQ641Q2 1341 aa19.58■□□□□ 0.73
COL9A2-208ENST00000488463 TRIM37O94972 964 aa19.58■□□□□ 0.72
COL9A2-208ENST00000488463 IL2RBP14784 551 aa19.57■□□□□ 0.72
COL9A2-208ENST00000488463 POLKQ9UBT6 870 aa19.57■□□□□ 0.72
COL9A2-208ENST00000488463 NSD2O96028 1365 aa19.57■□□□□ 0.72
COL9A2-208ENST00000488463 PER1O15534 1290 aaPredicted RBP19.56■□□□□ 0.72
COL9A2-208ENST00000488463 SF3B2Q13435 895 aaKnown RBP19.56■□□□□ 0.72
COL9A2-208ENST00000488463 NBPF6Q5VWK0 638 aa19.56■□□□□ 0.72
COL9A2-208ENST00000488463 NBPF4Q96M43 638 aa19.56■□□□□ 0.72
COL9A2-208ENST00000488463 SHANK3Q9BYB0 1731 aa19.56■□□□□ 0.72
COL9A2-208ENST00000488463 EXOC5O00471 708 aa19.55■□□□□ 0.72
COL9A2-208ENST00000488463 AMER1Q5JTC6 1135 aaPredicted RBP19.55■□□□□ 0.72
COL9A2-208ENST00000488463 NCAPD2Q15021 1401 aa19.54■□□□□ 0.72
COL9A2-208ENST00000488463 BAG6P46379 1132 aa19.54■□□□□ 0.72
COL9A2-208ENST00000488463 EN1Q05925 392 aaPredicted RBP19.54■□□□□ 0.72
COL9A2-208ENST00000488463 MEGF6O75095 1541 aa19.54■□□□□ 0.72
COL9A2-208ENST00000488463 SMG6Q86US8 1419 aaKnown RBP19.53■□□□□ 0.72
COL9A2-208ENST00000488463 PTF1AQ7RTS3 328 aa19.53■□□□□ 0.72
COL9A2-208ENST00000488463 CAMKK2Q96RR4 588 aa19.53■□□□□ 0.72
COL9A2-208ENST00000488463 RREB1Q92766 1687 aa19.52■□□□□ 0.72
COL9A2-208ENST00000488463 KNSTRNQ9Y448 316 aa19.51■□□□□ 0.71
COL9A2-208ENST00000488463 RGPD3A6NKT7 1758 aaPredicted RBP19.5■□□□□ 0.71
COL9A2-208ENST00000488463 RGPD4Q7Z3J3 1758 aa19.5■□□□□ 0.71
COL9A2-208ENST00000488463 TNNT2P45379 298 aaPredicted RBP19.5■□□□□ 0.71
COL9A2-208ENST00000488463 USHBP1Q8N6Y0 703 aa19.5■□□□□ 0.71
COL9A2-208ENST00000488463 NHSQ6T4R5 1651 aa19.49■□□□□ 0.71
COL9A2-208ENST00000488463 APBA3O96018 575 aa19.49■□□□□ 0.71
COL9A2-208ENST00000488463 EZH2Q15910 746 aaKnown RBP19.49■□□□□ 0.71
COL9A2-208ENST00000488463 PPM1GO15355 546 aaPredicted RBP19.48■□□□□ 0.71
COL9A2-208ENST00000488463 BCL11BQ9C0K0 894 aaPredicted RBP19.48■□□□□ 0.71
COL9A2-208ENST00000488463 NUP188Q5SRE5 1749 aa19.48■□□□□ 0.71
COL9A2-208ENST00000488463 PARD3Q8TEW0 1356 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms