RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 IRX6P78412 446 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-213ENST00000488131 HNRNPUQ00839 825 aaKnown RBP eCLIP6.37□□□□□ -1.39
CDC42BPA-213ENST00000488131 PRPF38BQ5VTL8 546 aaKnown RBP6.37□□□□□ -1.39
CDC42BPA-213ENST00000488131 FAM43AQ8N2R8 423 aa6.37□□□□□ -1.39
CDC42BPA-213ENST00000488131 KIFC2Q96AC6 838 aa6.37□□□□□ -1.39
CDC42BPA-213ENST00000488131 TOR4AQ9NXH8 423 aa6.37□□□□□ -1.39
CDC42BPA-213ENST00000488131 ZNF777Q9ULD5 760 aaPredicted RBP6.37□□□□□ -1.39
CDC42BPA-213ENST00000488131 MAP3K1Q13233 1512 aa6.37□□□□□ -1.39
CDC42BPA-213ENST00000488131 RNF123Q5XPI4 1314 aa6.37□□□□□ -1.39
CDC42BPA-213ENST00000488131 ZBED9Q6R2W3 1325 aa6.37□□□□□ -1.39
CDC42BPA-213ENST00000488131 NUTM2BA6NNL0 878 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-213ENST00000488131 NUTM2EB1AL46 878 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-213ENST00000488131 AP1G2O75843 785 aa6.36□□□□□ -1.39
CDC42BPA-213ENST00000488131 FMNL1O95466 1100 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-213ENST00000488131 NUTM2DQ5VT03 806 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-213ENST00000488131 NUTM2AQ8IVF1 878 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-213ENST00000488131 TRIM47Q96LD4 638 aa6.36□□□□□ -1.39
CDC42BPA-213ENST00000488131 FHAD1B1AJZ9 1412 aa6.36□□□□□ -1.39
CDC42BPA-213ENST00000488131 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
CDC42BPA-213ENST00000488131 B4GALNT3Q6L9W6 998 aa6.36□□□□□ -1.39
CDC42BPA-213ENST00000488131 SYMPKQ92797 1274 aaKnown RBP6.36□□□□□ -1.39
CDC42BPA-213ENST00000488131 SETD5Q9C0A6 1442 aa6.36□□□□□ -1.39
CDC42BPA-213ENST00000488131 SMARCA4P51532 1647 aa6.35□□□□□ -1.39
CDC42BPA-213ENST00000488131 CTDSPL2Q05D32 466 aa6.35□□□□□ -1.39
CDC42BPA-213ENST00000488131 ZBTB3Q9H5J0 574 aa6.35□□□□□ -1.39
CDC42BPA-213ENST00000488131 GDPD2Q9HCC8 539 aa6.35□□□□□ -1.39
CDC42BPA-213ENST00000488131 BRPF3Q9ULD4 1205 aa6.35□□□□□ -1.39
CDC42BPA-213ENST00000488131 CFAP99D6REC4 459 aa6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 NEFMP07197 916 aa6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 USP17L8P0C7I0 530 aa6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 ATP6V1AP38606 617 aa6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 GRIPAP1Q4V328 841 aa6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 GJD4Q96KN9 370 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 SMG6Q86US8 1419 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 TTC24A2A3L6 582 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 PUS10Q3MIT2 529 aaKnown RBP6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 PLA2G2CQ5R387 149 aa6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 NPAS3Q8IXF0 933 aa6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 CCDC82Q8N4S0 544 aa6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 HMX1Q9NP08 348 aaPredicted RBP6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 ATP13A2Q9NQ11 1180 aa6.34□□□□□ -1.39
CDC42BPA-213ENST00000488131 RAD21O60216 631 aa6.33□□□□□ -1.4
CDC42BPA-213ENST00000488131 GPR37L1O60883 481 aa6.33□□□□□ -1.4
CDC42BPA-213ENST00000488131 SNRPBP14678 240 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-213ENST00000488131 PODXL2Q9NZ53 605 aa6.33□□□□□ -1.4
CDC42BPA-213ENST00000488131 TBC1D2BQ9UPU7 963 aa6.33□□□□□ -1.4
CDC42BPA-213ENST00000488131 ABCA5Q8WWZ7 1642 aa6.33□□□□□ -1.4
CDC42BPA-213ENST00000488131 KDM5BQ9UGL1 1544 aa6.33□□□□□ -1.4
CDC42BPA-213ENST00000488131 KCNMA1Q12791 1236 aa6.32□□□□□ -1.4
CDC42BPA-213ENST00000488131 MTMR2Q13614 643 aa6.32□□□□□ -1.4
CDC42BPA-213ENST00000488131 MORN1Q5T089 497 aa6.32□□□□□ -1.4
CDC42BPA-213ENST00000488131 IRF7Q92985 503 aa6.32□□□□□ -1.4
CDC42BPA-213ENST00000488131 TRIM34Q9BYJ4 488 aa6.32□□□□□ -1.4
CDC42BPA-213ENST00000488131 FCF1Q9Y324 198 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-213ENST00000488131 PRXQ9BXM0 1461 aa6.32□□□□□ -1.4
CDC42BPA-213ENST00000488131 SOCS7O14512 581 aa6.32□□□□□ -1.4
CDC42BPA-213ENST00000488131 GMPRP36959 345 aa6.32□□□□□ -1.4
CDC42BPA-213ENST00000488131 LRRN4Q8WUT4 740 aa6.32□□□□□ -1.4
CDC42BPA-213ENST00000488131 CNTLNQ9NXG0 1405 aa6.32□□□□□ -1.4
CDC42BPA-213ENST00000488131 KANK4Q5T7N3 995 aaPredicted RBP6.31□□□□□ -1.4
CDC42BPA-213ENST00000488131 EPS8L1Q8TE68 723 aa6.31□□□□□ -1.4
CDC42BPA-213ENST00000488131 SLC27A5Q9Y2P5 690 aa6.31□□□□□ -1.4
CDC42BPA-213ENST00000488131 TIAM1Q13009 1591 aa6.31□□□□□ -1.4
CDC42BPA-213ENST00000488131 C6orf229H3BNL8 230 aa6.3□□□□□ -1.4
CDC42BPA-213ENST00000488131 ABL2P42684 1182 aa6.3□□□□□ -1.4
CDC42BPA-213ENST00000488131 Q3C1V9 767 aa6.3□□□□□ -1.4
CDC42BPA-213ENST00000488131 SNIP1Q8TAD8 396 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-213ENST00000488131 POLR1AO95602 1720 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-213ENST00000488131 POM121CA8CG34 1229 aa6.3□□□□□ -1.4
CDC42BPA-213ENST00000488131 PER1O15534 1290 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-213ENST00000488131 IRF5Q13568 498 aa6.3□□□□□ -1.4
CDC42BPA-213ENST00000488131 KCTD17Q8N5Z5 321 aa6.3□□□□□ -1.4
CDC42BPA-213ENST00000488131 NXF1Q9UBU9 619 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-213ENST00000488131 ZNF330Q9Y3S2 320 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-213ENST00000488131 TCERG1O14776 1098 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-213ENST00000488131 RRP9O43818 475 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-213ENST00000488131 PRR7Q8TB68 274 aa6.29□□□□□ -1.4
CDC42BPA-213ENST00000488131 THAP11Q96EK4 314 aa6.29□□□□□ -1.4
CDC42BPA-213ENST00000488131 CFAP43Q8NDM7 1665 aa6.29□□□□□ -1.4
CDC42BPA-213ENST00000488131 WNT7AO00755 349 aa6.28□□□□□ -1.4
CDC42BPA-213ENST00000488131 MSS51Q4VC12 460 aa6.28□□□□□ -1.4
CDC42BPA-213ENST00000488131 BRICD5Q6PL45 260 aa6.28□□□□□ -1.4
CDC42BPA-213ENST00000488131 TSC1Q92574 1164 aa6.28□□□□□ -1.4
CDC42BPA-213ENST00000488131 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDC42BPA-213ENST00000488131 TOP2BQ02880 1626 aa6.28□□□□□ -1.4
CDC42BPA-213ENST00000488131 BIVM-ERCC5R4GMW8 1640 aa6.28□□□□□ -1.4
CDC42BPA-213ENST00000488131 RNF19BQ6ZMZ0 732 aa6.28□□□□□ -1.4
CDC42BPA-213ENST00000488131 FAM160A2Q8N612 972 aaPredicted RBP6.28□□□□□ -1.4
CDC42BPA-213ENST00000488131 LAS1LQ9Y4W2 734 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-213ENST00000488131 FRAT1Q92837 279 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-213ENST00000488131 SIN3AQ96ST3 1273 aa6.27□□□□□ -1.41
CDC42BPA-213ENST00000488131 AKNAQ7Z591 1439 aa6.27□□□□□ -1.41
CDC42BPA-213ENST00000488131 NFKBIBQ15653 356 aa6.26□□□□□ -1.41
CDC42BPA-213ENST00000488131 BACH2Q9BYV9 841 aa6.26□□□□□ -1.41
CDC42BPA-213ENST00000488131 ARHGAP35Q9NRY4 1499 aa6.26□□□□□ -1.41
CDC42BPA-213ENST00000488131 RETREG3Q86VR2 466 aa6.26□□□□□ -1.41
CDC42BPA-213ENST00000488131 TMEM151AQ8N4L1 468 aa6.26□□□□□ -1.41
CDC42BPA-213ENST00000488131 HELBQ8NG08 1087 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-213ENST00000488131 ADAMTS19Q8TE59 1207 aa6.26□□□□□ -1.41
CDC42BPA-213ENST00000488131 NUDCQ9Y266 331 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms