RNA–Protein interactions for RNA: ENST00000488033.5

HCLS1-209, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-209ENST00000488033 IFFO2Q5TF58 517 aa19.78■□□□□ 0.76
HCLS1-209ENST00000488033 TOM1L2Q6ZVM7 507 aa19.78■□□□□ 0.76
HCLS1-209ENST00000488033 SLC15A2Q16348 729 aa19.77■□□□□ 0.76
HCLS1-209ENST00000488033 TXNRD1Q16881 649 aa19.77■□□□□ 0.76
HCLS1-209ENST00000488033 MARCH10Q8NA82 808 aaPredicted RBP19.76■□□□□ 0.75
HCLS1-209ENST00000488033 MTFR1LQ9H019 292 aa19.76■□□□□ 0.75
HCLS1-209ENST00000488033 STAC3Q96MF2 364 aa19.75■□□□□ 0.75
HCLS1-209ENST00000488033 AKAP12Q02952 1782 aa19.75■□□□□ 0.75
HCLS1-209ENST00000488033 AATKQ6ZMQ8 1374 aa19.73■□□□□ 0.75
HCLS1-209ENST00000488033 ARXQ96QS3 562 aa19.72■□□□□ 0.75
HCLS1-209ENST00000488033 SGIP1Q9BQI5 828 aa19.72■□□□□ 0.75
HCLS1-209ENST00000488033 CDCA7Q9BWT1 371 aaPredicted RBP19.72■□□□□ 0.75
HCLS1-209ENST00000488033 WNK3Q9BYP7 1800 aa19.72■□□□□ 0.75
HCLS1-209ENST00000488033 BCL9O00512 1426 aa19.71■□□□□ 0.75
HCLS1-209ENST00000488033 PPIP5K1Q6PFW1 1433 aa19.71■□□□□ 0.75
HCLS1-209ENST00000488033 NLRP6P59044 892 aa19.71■□□□□ 0.75
HCLS1-209ENST00000488033 CEP350Q5VT06 3117 aa19.71■□□□□ 0.75
HCLS1-209ENST00000488033 SRPK2P78362 688 aaKnown RBP19.7■□□□□ 0.74
HCLS1-209ENST00000488033 WDR17Q8IZU2 1322 aa19.7■□□□□ 0.74
HCLS1-209ENST00000488033 GIGYF1O75420 1035 aaPredicted RBP19.69■□□□□ 0.74
HCLS1-209ENST00000488033 GPR162Q16538 588 aa19.69■□□□□ 0.74
HCLS1-209ENST00000488033 AXIN2Q9Y2T1 843 aa19.68■□□□□ 0.74
HCLS1-209ENST00000488033 BRD4O60885 1362 aaPredicted RBP19.68■□□□□ 0.74
HCLS1-209ENST00000488033 EXOC5O00471 708 aa19.67■□□□□ 0.74
HCLS1-209ENST00000488033 CSB-PGBD3P0DP91 1061 aa19.67■□□□□ 0.74
HCLS1-209ENST00000488033 COL18A1P39060 1754 aa19.67■□□□□ 0.74
HCLS1-209ENST00000488033 SLIT3O75094 1523 aa19.66■□□□□ 0.74
HCLS1-209ENST00000488033 CABP2Q9NPB3 220 aa19.66■□□□□ 0.74
HCLS1-209ENST00000488033 GOLGB1Q14789 3259 aaKnown RBP19.66■□□□□ 0.74
HCLS1-209ENST00000488033 CARD10Q9BWT7 1032 aa19.64■□□□□ 0.73
HCLS1-209ENST00000488033 MAP3K5Q99683 1374 aa19.64■□□□□ 0.73
HCLS1-209ENST00000488033 RGPD5Q99666 1765 aa19.64■□□□□ 0.73
HCLS1-209ENST00000488033 USP6P35125 1406 aa19.63■□□□□ 0.73
HCLS1-209ENST00000488033 RAB3GAP2Q9H2M9 1393 aa19.63■□□□□ 0.73
HCLS1-209ENST00000488033 KLHL34Q8N239 644 aa19.63■□□□□ 0.73
HCLS1-209ENST00000488033 CABP1Q9NZU7 370 aa19.63■□□□□ 0.73
HCLS1-209ENST00000488033 PELP1Q8IZL8 1130 aaKnown RBP19.62■□□□□ 0.73
HCLS1-209ENST00000488033 ACSBG1Q96GR2 724 aa19.62■□□□□ 0.73
HCLS1-209ENST00000488033 KAT6BQ8WYB5 2073 aa19.61■□□□□ 0.73
HCLS1-209ENST00000488033 CPSF1Q10570 1443 aaKnown RBP19.61■□□□□ 0.73
HCLS1-209ENST00000488033 SOX12O15370 315 aa19.6■□□□□ 0.73
HCLS1-209ENST00000488033 ARHGEF25Q86VW2 580 aa19.6■□□□□ 0.73
HCLS1-209ENST00000488033 NHSQ6T4R5 1651 aa19.59■□□□□ 0.73
HCLS1-209ENST00000488033 PIK3C2AO00443 1686 aa19.59■□□□□ 0.73
HCLS1-209ENST00000488033 CENPJQ9HC77 1338 aaPredicted RBP19.58■□□□□ 0.73
HCLS1-209ENST00000488033 ZNF827Q17R98 1081 aa19.58■□□□□ 0.72
HCLS1-209ENST00000488033 NBPF1Q3BBV0 1214 aa19.58■□□□□ 0.72
HCLS1-209ENST00000488033 KCNH5Q8NCM2 988 aa19.58■□□□□ 0.72
HCLS1-209ENST00000488033 CCDC7Q96M83 1385 aa19.57■□□□□ 0.72
HCLS1-209ENST00000488033 KIAA1210Q9ULL0 1709 aa19.57■□□□□ 0.72
HCLS1-209ENST00000488033 PAPPAQ13219 1627 aa19.57■□□□□ 0.72
HCLS1-209ENST00000488033 TNS2Q63HR2 1409 aa19.57■□□□□ 0.72
HCLS1-209ENST00000488033 POLD1P28340 1107 aa19.56■□□□□ 0.72
HCLS1-209ENST00000488033 BTAF1O14981 1849 aa19.54■□□□□ 0.72
HCLS1-209ENST00000488033 SLC16A10Q8TF71 515 aa19.54■□□□□ 0.72
HCLS1-209ENST00000488033 QRICH2Q9H0J4 1663 aa19.54■□□□□ 0.72
HCLS1-209ENST00000488033 SHANK3Q9BYB0 1731 aa19.54■□□□□ 0.72
HCLS1-209ENST00000488033 LRRC4BQ9NT99 713 aa19.53■□□□□ 0.72
HCLS1-209ENST00000488033 TRPM1Q7Z4N2 1603 aa19.53■□□□□ 0.72
HCLS1-209ENST00000488033 TTC21BQ7Z4L5 1316 aa19.52■□□□□ 0.72
HCLS1-209ENST00000488033 NLGN2Q8NFZ4 835 aa19.51■□□□□ 0.71
HCLS1-209ENST00000488033 AKT1S1Q96B36 256 aa19.5■□□□□ 0.71
HCLS1-209ENST00000488033 NLRP2Q9NX02 1062 aa19.5■□□□□ 0.71
HCLS1-209ENST00000488033 ABCC6O95255 1503 aa19.5■□□□□ 0.71
HCLS1-209ENST00000488033 ZNF692Q9BU19 519 aaPredicted RBP19.49■□□□□ 0.71
HCLS1-209ENST00000488033 GRIN3BO60391 1043 aa19.48■□□□□ 0.71
HCLS1-209ENST00000488033 IL2RBP14784 551 aa19.48■□□□□ 0.71
HCLS1-209ENST00000488033 QSER1Q2KHR3 1735 aa19.48■□□□□ 0.71
HCLS1-209ENST00000488033 NFAT5O94916 1531 aa19.47■□□□□ 0.71
HCLS1-209ENST00000488033 TFCP2L1Q9NZI6 479 aa19.47■□□□□ 0.71
HCLS1-209ENST00000488033 COL24A1Q17RW2 1714 aa19.47■□□□□ 0.71
HCLS1-209ENST00000488033 PNPLA7Q6ZV29 1317 aa19.47■□□□□ 0.71
HCLS1-209ENST00000488033 EVC2Q86UK5 1308 aa19.47■□□□□ 0.71
HCLS1-209ENST00000488033 TTC21AQ8NDW8 1320 aa19.47■□□□□ 0.71
HCLS1-209ENST00000488033 SLC27A3Q5K4L6 730 aa19.46■□□□□ 0.71
HCLS1-209ENST00000488033 YBX3P16989 372 aaKnown RBP eCLIP19.45■□□□□ 0.7
HCLS1-209ENST00000488033 ERBB3P21860 1342 aa19.44■□□□□ 0.7
HCLS1-209ENST00000488033 TUBGCP6Q96RT7 1819 aa19.43■□□□□ 0.7
HCLS1-209ENST00000488033 ATP10DQ9P241 1426 aa19.42■□□□□ 0.7
HCLS1-209ENST00000488033 KCNQ4P56696 695 aa19.42■□□□□ 0.7
HCLS1-209ENST00000488033 GPBP1L1Q9HC44 474 aaPredicted RBP19.41■□□□□ 0.7
HCLS1-209ENST00000488033 KTN1Q86UP2 1357 aaKnown RBP19.41■□□□□ 0.7
HCLS1-209ENST00000488033 MSH5O43196 834 aa19.4■□□□□ 0.7
HCLS1-209ENST00000488033 DDX54Q8TDD1 881 aaKnown RBP19.4■□□□□ 0.7
HCLS1-209ENST00000488033 ANKRD24Q8TF21 1146 aa19.4■□□□□ 0.7
HCLS1-209ENST00000488033 HSPA6P17066 643 aa19.39■□□□□ 0.69
HCLS1-209ENST00000488033 SYTL4Q96C24 671 aaPredicted RBP19.39■□□□□ 0.69
HCLS1-209ENST00000488033 LTN1O94822 1766 aa19.38■□□□□ 0.69
HCLS1-209ENST00000488033 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.38■□□□□ 0.69
HCLS1-209ENST00000488033 ZNF526Q8TF50 670 aaPredicted RBP19.37■□□□□ 0.69
HCLS1-209ENST00000488033 PRIM1P49642 420 aaKnown RBP19.35■□□□□ 0.69
HCLS1-209ENST00000488033 USP31Q70CQ4 1352 aa19.34■□□□□ 0.69
HCLS1-209ENST00000488033 MSL1Q68DK7 614 aa19.34■□□□□ 0.69
HCLS1-209ENST00000488033 COL23A1Q86Y22 540 aaPredicted RBP19.34■□□□□ 0.69
HCLS1-209ENST00000488033 LY75O60449 1722 aa19.34■□□□□ 0.69
HCLS1-209ENST00000488033 NME9Q86XW9 330 aa19.33■□□□□ 0.68
HCLS1-209ENST00000488033 CCNL1Q9UK58 526 aaPredicted RBP19.33■□□□□ 0.68
HCLS1-209ENST00000488033 MON2Q7Z3U7 1717 aa19.33■□□□□ 0.68
HCLS1-209ENST00000488033 ANKRD36BQ8N2N9 1353 aa19.32■□□□□ 0.68
HCLS1-209ENST00000488033 LTV1Q96GA3 475 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms