RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 SLC26A8Q96RN1 970 aa11.52□□□□□ -0.57
NECTIN3-209ENST00000488016 EID1Q9Y6B2 187 aa11.51□□□□□ -0.57
NECTIN3-209ENST00000488016 PPP1R15AO75807 674 aaPredicted RBP11.5□□□□□ -0.57
NECTIN3-209ENST00000488016 TSR1Q2NL82 804 aaKnown RBP11.5□□□□□ -0.57
NECTIN3-209ENST00000488016 KCNV2Q8TDN2 545 aa11.5□□□□□ -0.57
NECTIN3-209ENST00000488016 RGS17Q9UGC6 210 aaPredicted RBP11.5□□□□□ -0.57
NECTIN3-209ENST00000488016 KIF1BO60333 1816 aa11.5□□□□□ -0.57
NECTIN3-209ENST00000488016 NEXMIFQ5QGS0 1516 aa11.5□□□□□ -0.57
NECTIN3-209ENST00000488016 ONECUT3O60422 494 aaPredicted RBP11.49□□□□□ -0.57
NECTIN3-209ENST00000488016 TOM1O60784 492 aa11.49□□□□□ -0.57
NECTIN3-209ENST00000488016 WNT2BQ93097 391 aa11.49□□□□□ -0.57
NECTIN3-209ENST00000488016 BCANQ96GW7 911 aa11.49□□□□□ -0.57
NECTIN3-209ENST00000488016 TRIM6-TRIM34B2RNG4 842 aa11.48□□□□□ -0.57
NECTIN3-209ENST00000488016 KIAA1468Q9P260 1216 aa11.48□□□□□ -0.57
NECTIN3-209ENST00000488016 CCDC144AA2RUR9 1427 aa11.48□□□□□ -0.57
NECTIN3-209ENST00000488016 NRXN3Q9Y4C0 1643 aa11.48□□□□□ -0.57
NECTIN3-209ENST00000488016 PLEKHG1Q9ULL1 1385 aa11.47□□□□□ -0.57
NECTIN3-209ENST00000488016 TRIM26Q12899 539 aaPredicted RBP11.47□□□□□ -0.57
NECTIN3-209ENST00000488016 RGL3Q3MIN7 710 aa11.47□□□□□ -0.57
NECTIN3-209ENST00000488016 SPATA31E1Q6ZUB1 1445 aa11.46□□□□□ -0.57
NECTIN3-209ENST00000488016 ADAMTS13Q76LX8 1427 aa11.46□□□□□ -0.57
NECTIN3-209ENST00000488016 PTPN5P54829 565 aa11.46□□□□□ -0.57
NECTIN3-209ENST00000488016 ANKRD30BQ9BXX2 1392 aa11.45□□□□□ -0.58
NECTIN3-209ENST00000488016 HAP1P54257 671 aaPredicted RBP11.45□□□□□ -0.58
NECTIN3-209ENST00000488016 THSD4Q6ZMP0 1018 aa11.45□□□□□ -0.58
NECTIN3-209ENST00000488016 LAPTM4BQ86VI4 370 aa11.45□□□□□ -0.58
NECTIN3-209ENST00000488016 ANKK1Q8NFD2 765 aa11.45□□□□□ -0.58
NECTIN3-209ENST00000488016 PPLO60437 1756 aa11.44□□□□□ -0.58
NECTIN3-209ENST00000488016 OSBPP22059 807 aa11.44□□□□□ -0.58
NECTIN3-209ENST00000488016 ALKQ9UM73 1620 aa11.44□□□□□ -0.58
NECTIN3-209ENST00000488016 HRCP23327 699 aa11.43□□□□□ -0.58
NECTIN3-209ENST00000488016 PRIM1P49642 420 aaKnown RBP11.43□□□□□ -0.58
NECTIN3-209ENST00000488016 PACS2Q86VP3 889 aa11.43□□□□□ -0.58
NECTIN3-209ENST00000488016 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.43□□□□□ -0.58
NECTIN3-209ENST00000488016 LRRC7Q96NW7 1537 aa11.43□□□□□ -0.58
NECTIN3-209ENST00000488016 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
NECTIN3-209ENST00000488016 CPS1P31327 1500 aa11.42□□□□□ -0.58
NECTIN3-209ENST00000488016 SEPT9Q9UHD8 586 aaPredicted RBP11.42□□□□□ -0.58
NECTIN3-209ENST00000488016 IFT172Q9UG01 1749 aa11.42□□□□□ -0.58
NECTIN3-209ENST00000488016 XIRP1Q702N8 1843 aaKnown RBP11.42□□□□□ -0.58
NECTIN3-209ENST00000488016 SETBP1Q9Y6X0 1596 aa11.41□□□□□ -0.58
NECTIN3-209ENST00000488016 ADGRF5Q8IZF2 1346 aa11.41□□□□□ -0.58
NECTIN3-209ENST00000488016 POTEAQ6S8J7 498 aa11.41□□□□□ -0.58
NECTIN3-209ENST00000488016 PLA2G2EQ9NZK7 142 aa11.41□□□□□ -0.58
NECTIN3-209ENST00000488016 NWD1Q149M9 1564 aa11.41□□□□□ -0.58
NECTIN3-209ENST00000488016 METP08581 1390 aa11.41□□□□□ -0.58
NECTIN3-209ENST00000488016 SETD1AO15047 1707 aaKnown RBP11.4□□□□□ -0.58
NECTIN3-209ENST00000488016 CDCA7LQ96GN5 454 aa11.4□□□□□ -0.58
NECTIN3-209ENST00000488016 PCGF6Q9BYE7 350 aa11.4□□□□□ -0.58
NECTIN3-209ENST00000488016 DHX57Q6P158 1386 aaKnown RBP11.4□□□□□ -0.59
NECTIN3-209ENST00000488016 CHD2O14647 1828 aaKnown RBP11.39□□□□□ -0.59
NECTIN3-209ENST00000488016 KCNA6P17658 529 aa11.39□□□□□ -0.59
NECTIN3-209ENST00000488016 HDGFP51858 240 aaKnown RBP11.39□□□□□ -0.59
NECTIN3-209ENST00000488016 PRSS12P56730 875 aa11.39□□□□□ -0.59
NECTIN3-209ENST00000488016 FAM98CQ17RN3 349 aaKnown RBP11.39□□□□□ -0.59
NECTIN3-209ENST00000488016 SIN3AQ96ST3 1273 aa11.39□□□□□ -0.59
NECTIN3-209ENST00000488016 CDHR5Q9HBB8 845 aa11.39□□□□□ -0.59
NECTIN3-209ENST00000488016 DIP2AQ14689 1571 aa11.38□□□□□ -0.59
NECTIN3-209ENST00000488016 MLLT3P42568 568 aaPredicted RBP11.38□□□□□ -0.59
NECTIN3-209ENST00000488016 ZFRQ96KR1 1074 aaKnown RBP11.38□□□□□ -0.59
NECTIN3-209ENST00000488016 TSKSQ9UJT2 592 aa11.38□□□□□ -0.59
NECTIN3-209ENST00000488016 TBX22Q9Y458 520 aa11.38□□□□□ -0.59
NECTIN3-209ENST00000488016 TMEM94Q12767 1356 aa11.38□□□□□ -0.59
NECTIN3-209ENST00000488016 ACIN1Q9UKV3 1341 aaKnown RBP11.37□□□□□ -0.59
NECTIN3-209ENST00000488016 ASXL1Q8IXJ9 1541 aa11.37□□□□□ -0.59
NECTIN3-209ENST00000488016 RPGRIP1LQ68CZ1 1315 aa11.36□□□□□ -0.59
NECTIN3-209ENST00000488016 XRN1Q8IZH2 1706 aaKnown RBP11.36□□□□□ -0.59
NECTIN3-209ENST00000488016 PROSER2Q86WR7 435 aaPredicted RBP11.36□□□□□ -0.59
NECTIN3-209ENST00000488016 AMOTL2Q9Y2J4 779 aa11.36□□□□□ -0.59
NECTIN3-209ENST00000488016 KDM2AQ9Y2K7 1162 aa11.36□□□□□ -0.59
NECTIN3-209ENST00000488016 NBPF26B4DH59 902 aa11.35□□□□□ -0.59
NECTIN3-209ENST00000488016 TMEM132EQ6IEE7 984 aa11.35□□□□□ -0.59
NECTIN3-209ENST00000488016 NKTRP30414 1462 aaKnown RBP11.35□□□□□ -0.59
NECTIN3-209ENST00000488016 PIK3C2GO75747 1445 aa11.35□□□□□ -0.59
NECTIN3-209ENST00000488016 SOWAHBA6NEL2 793 aa11.34□□□□□ -0.59
NECTIN3-209ENST00000488016 BCAMP50895 628 aa11.34□□□□□ -0.59
NECTIN3-209ENST00000488016 NEUROD1Q13562 356 aa11.34□□□□□ -0.59
NECTIN3-209ENST00000488016 RBM27Q9P2N5 1060 aaKnown RBP11.34□□□□□ -0.59
NECTIN3-209ENST00000488016 NRXN1Q9ULB1 1477 aa11.33□□□□□ -0.6
NECTIN3-209ENST00000488016 CFAP70Q5T0N1 1121 aa11.33□□□□□ -0.6
NECTIN3-209ENST00000488016 DCAF11Q8TEB1 546 aa11.33□□□□□ -0.6
NECTIN3-209ENST00000488016 LRCH3Q96II8 777 aa11.33□□□□□ -0.6
NECTIN3-209ENST00000488016 MYOM2P54296 1465 aa11.32□□□□□ -0.6
NECTIN3-209ENST00000488016 ROBO2Q9HCK4 1378 aa11.32□□□□□ -0.6
NECTIN3-209ENST00000488016 STK26Q9P289 416 aa11.32□□□□□ -0.6
NECTIN3-209ENST00000488016 PIK3R4Q99570 1358 aa11.31□□□□□ -0.6
NECTIN3-209ENST00000488016 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.31□□□□□ -0.6
NECTIN3-209ENST00000488016 PNMA3Q9UL41 463 aa11.31□□□□□ -0.6
NECTIN3-209ENST00000488016 PLEKHH1Q9ULM0 1364 aa11.3□□□□□ -0.6
NECTIN3-209ENST00000488016 SMAPO00193 183 aa11.3□□□□□ -0.6
NECTIN3-209ENST00000488016 C14orf37Q86TY3 774 aa11.3□□□□□ -0.6
NECTIN3-209ENST00000488016 TATDN2Q93075 761 aa11.3□□□□□ -0.6
NECTIN3-209ENST00000488016 FAM198AQ9UFP1 575 aa11.3□□□□□ -0.6
NECTIN3-209ENST00000488016 NALCNQ8IZF0 1738 aa11.29□□□□□ -0.6
NECTIN3-209ENST00000488016 SEMA3EO15041 775 aa11.29□□□□□ -0.6
NECTIN3-209ENST00000488016 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.29□□□□□ -0.6
NECTIN3-209ENST00000488016 PADI6Q6TGC4 694 aa11.28□□□□□ -0.6
NECTIN3-209ENST00000488016 NYAP1Q6ZVC0 841 aa11.28□□□□□ -0.6
NECTIN3-209ENST00000488016 L3MBTL2Q969R5 705 aa11.28□□□□□ -0.6
NECTIN3-209ENST00000488016 C14orf93Q9H972 538 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms