RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 UPF1Q92900 1129 aaKnown RBP eCLIP23.72■■□□□ 1.39
HMG20B-212ENST00000487894 PARP4Q9UKK3 1724 aaKnown RBP23.72■■□□□ 1.39
HMG20B-212ENST00000487894 ANKRD26Q9UPS8 1709 aa23.72■■□□□ 1.39
HMG20B-212ENST00000487894 FAM98CQ17RN3 349 aaKnown RBP23.71■■□□□ 1.39
HMG20B-212ENST00000487894 LARP1Q6PKG0 1096 aaKnown RBP23.71■■□□□ 1.39
HMG20B-212ENST00000487894 NSD3Q9BZ95 1437 aa23.7■■□□□ 1.38
HMG20B-212ENST00000487894 CRB1P82279 1406 aa23.69■■□□□ 1.38
HMG20B-212ENST00000487894 EVA1CP58658 441 aa23.69■■□□□ 1.38
HMG20B-212ENST00000487894 AXIN2Q9Y2T1 843 aa23.69■■□□□ 1.38
HMG20B-212ENST00000487894 FAM208AQ9UK61 1670 aaKnown RBP23.67■■□□□ 1.38
HMG20B-212ENST00000487894 POLR3GLQ9BT43 218 aa23.67■■□□□ 1.38
HMG20B-212ENST00000487894 CARD14Q9BXL6 1004 aa23.67■■□□□ 1.38
HMG20B-212ENST00000487894 COG3Q96JB2 828 aa23.66■■□□□ 1.38
HMG20B-212ENST00000487894 LRRC37A3O60309 1634 aa23.66■■□□□ 1.38
HMG20B-212ENST00000487894 A0A0G2JS52 829 aa23.65■■□□□ 1.38
HMG20B-212ENST00000487894 C11orf95C9JLR9 678 aaPredicted RBP23.65■■□□□ 1.38
HMG20B-212ENST00000487894 FYB1O15117 783 aa23.65■■□□□ 1.38
HMG20B-212ENST00000487894 MYT1Q01538 1121 aa23.65■■□□□ 1.38
HMG20B-212ENST00000487894 USP35Q9P2H5 1018 aa23.65■■□□□ 1.38
HMG20B-212ENST00000487894 WDR17Q8IZU2 1322 aa23.64■■□□□ 1.38
HMG20B-212ENST00000487894 BARGINQ6ZT62 677 aa23.63■■□□□ 1.37
HMG20B-212ENST00000487894 GGNBP2Q9H3C7 697 aa23.63■■□□□ 1.37
HMG20B-212ENST00000487894 KRT27Q7Z3Y8 459 aa23.62■■□□□ 1.37
HMG20B-212ENST00000487894 TCP11L2Q8N4U5 519 aa23.62■■□□□ 1.37
HMG20B-212ENST00000487894 RGPD2P0DJD1 1756 aa23.62■■□□□ 1.37
HMG20B-212ENST00000487894 PEAK1Q9H792 1746 aa23.62■■□□□ 1.37
HMG20B-212ENST00000487894 RGPD1P0DJD0 1748 aa23.61■■□□□ 1.37
HMG20B-212ENST00000487894 BLMP54132 1417 aaPredicted RBP23.6■■□□□ 1.37
HMG20B-212ENST00000487894 THRAP3Q9Y2W1 955 aaKnown RBP23.6■■□□□ 1.37
HMG20B-212ENST00000487894 MAP2P11137 1827 aaKnown RBP23.59■■□□□ 1.37
HMG20B-212ENST00000487894 TOM1L2Q6ZVM7 507 aa23.59■■□□□ 1.37
HMG20B-212ENST00000487894 TNS1Q9HBL0 1735 aaKnown RBP23.59■■□□□ 1.37
HMG20B-212ENST00000487894 ERBB3P21860 1342 aa23.59■■□□□ 1.37
HMG20B-212ENST00000487894 KIF7Q2M1P5 1343 aa23.58■■□□□ 1.36
HMG20B-212ENST00000487894 MAP3K19Q56UN5 1328 aa23.58■■□□□ 1.36
HMG20B-212ENST00000487894 FBLN1P23142 703 aa23.57■■□□□ 1.36
HMG20B-212ENST00000487894 RTL1A6NKG5 1358 aa23.56■■□□□ 1.36
HMG20B-212ENST00000487894 DISP2A7MBM2 1401 aa23.56■■□□□ 1.36
HMG20B-212ENST00000487894 CSB-PGBD3P0DP91 1061 aa23.55■■□□□ 1.36
HMG20B-212ENST00000487894 CGNL1Q0VF96 1302 aa23.55■■□□□ 1.36
HMG20B-212ENST00000487894 IP6K1Q92551 441 aa23.54■■□□□ 1.36
HMG20B-212ENST00000487894 CARD10Q9BWT7 1032 aa23.54■■□□□ 1.36
HMG20B-212ENST00000487894 SBF2Q86WG5 1849 aa23.54■■□□□ 1.36
HMG20B-212ENST00000487894 CCDC7Q96M83 1385 aa23.53■■□□□ 1.36
HMG20B-212ENST00000487894 ANKRD24Q8TF21 1146 aa23.53■■□□□ 1.36
HMG20B-212ENST00000487894 PANK3Q9H999 370 aa23.53■■□□□ 1.36
HMG20B-212ENST00000487894 HOXC9P31274 260 aa23.52■■□□□ 1.36
HMG20B-212ENST00000487894 FAM182BQ5T319 152 aa23.52■■□□□ 1.36
HMG20B-212ENST00000487894 RRS1Q15050 365 aaKnown RBP23.51■■□□□ 1.35
HMG20B-212ENST00000487894 AMPHP49418 695 aa23.49■■□□□ 1.35
HMG20B-212ENST00000487894 CCDC125Q86Z20 511 aa23.49■■□□□ 1.35
HMG20B-212ENST00000487894 KIF24Q5T7B8 1368 aa23.48■■□□□ 1.35
HMG20B-212ENST00000487894 NLRP2Q9NX02 1062 aa23.47■■□□□ 1.35
HMG20B-212ENST00000487894 NSD2O96028 1365 aa23.47■■□□□ 1.35
HMG20B-212ENST00000487894 FLT4P35916 1363 aa23.47■■□□□ 1.35
HMG20B-212ENST00000487894 PDE3BQ13370 1112 aa23.46■■□□□ 1.35
HMG20B-212ENST00000487894 TNS2Q63HR2 1409 aa23.46■■□□□ 1.35
HMG20B-212ENST00000487894 CDCA7Q9BWT1 371 aaPredicted RBP23.46■■□□□ 1.35
HMG20B-212ENST00000487894 SHANK3Q9BYB0 1731 aa23.46■■□□□ 1.35
HMG20B-212ENST00000487894 WASHC2AQ641Q2 1341 aa23.45■■□□□ 1.34
HMG20B-212ENST00000487894 LTV1Q96GA3 475 aaPredicted RBP23.45■■□□□ 1.34
HMG20B-212ENST00000487894 OVOS2A0A0G2JMS6 1433 aa23.44■■□□□ 1.34
HMG20B-212ENST00000487894 DDB1Q16531 1140 aa23.44■■□□□ 1.34
HMG20B-212ENST00000487894 INSRP06213 1382 aa23.43■■□□□ 1.34
HMG20B-212ENST00000487894 EMILIN1Q9Y6C2 1016 aa23.43■■□□□ 1.34
HMG20B-212ENST00000487894 SMG6Q86US8 1419 aaKnown RBP23.42■■□□□ 1.34
HMG20B-212ENST00000487894 FAM196AQ6ZSG2 479 aa23.42■■□□□ 1.34
HMG20B-212ENST00000487894 HSP90AB2PQ58FF8 381 aa23.4■■□□□ 1.34
HMG20B-212ENST00000487894 IL2RBP14784 551 aa23.39■■□□□ 1.33
HMG20B-212ENST00000487894 SF3B2Q13435 895 aaKnown RBP23.39■■□□□ 1.33
HMG20B-212ENST00000487894 DEFB132Q7Z7B7 95 aa23.39■■□□□ 1.33
HMG20B-212ENST00000487894 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.33
HMG20B-212ENST00000487894 RREB1Q92766 1687 aa23.38■■□□□ 1.33
HMG20B-212ENST00000487894 MEGF6O75095 1541 aa23.38■■□□□ 1.33
HMG20B-212ENST00000487894 NHSQ6T4R5 1651 aa23.38■■□□□ 1.33
HMG20B-212ENST00000487894 RGPD3A6NKT7 1758 aaPredicted RBP23.37■■□□□ 1.33
HMG20B-212ENST00000487894 RGPD4Q7Z3J3 1758 aa23.37■■□□□ 1.33
HMG20B-212ENST00000487894 AMER1Q5JTC6 1135 aaPredicted RBP23.37■■□□□ 1.33
HMG20B-212ENST00000487894 MARCH10Q8NA82 808 aaPredicted RBP23.37■■□□□ 1.33
HMG20B-212ENST00000487894 POLKQ9UBT6 870 aa23.37■■□□□ 1.33
HMG20B-212ENST00000487894 BCL9O00512 1426 aa23.36■■□□□ 1.33
HMG20B-212ENST00000487894 TRIM37O94972 964 aa23.36■■□□□ 1.33
HMG20B-212ENST00000487894 TNNT2P45379 298 aaPredicted RBP23.36■■□□□ 1.33
HMG20B-212ENST00000487894 SRCAPQ6ZRS2 3230 aa23.36■■□□□ 1.33
HMG20B-212ENST00000487894 EXOC5O00471 708 aa23.35■■□□□ 1.33
HMG20B-212ENST00000487894 PER1O15534 1290 aaPredicted RBP23.35■■□□□ 1.33
HMG20B-212ENST00000487894 NBPF6Q5VWK0 638 aa23.35■■□□□ 1.33
HMG20B-212ENST00000487894 NBPF4Q96M43 638 aa23.35■■□□□ 1.33
HMG20B-212ENST00000487894 PKD1L3Q7Z443 1732 aa23.35■■□□□ 1.33
HMG20B-212ENST00000487894 NCAPD2Q15021 1401 aa23.34■■□□□ 1.33
HMG20B-212ENST00000487894 PPM1GO15355 546 aaPredicted RBP23.34■■□□□ 1.33
HMG20B-212ENST00000487894 BAG6P46379 1132 aa23.34■■□□□ 1.33
HMG20B-212ENST00000487894 NUP188Q5SRE5 1749 aa23.33■■□□□ 1.33
HMG20B-212ENST00000487894 MORC1Q86VD1 984 aa23.33■■□□□ 1.33
HMG20B-212ENST00000487894 DOT1LQ8TEK3 1739 aa23.33■■□□□ 1.32
HMG20B-212ENST00000487894 USHBP1Q8N6Y0 703 aa23.32■■□□□ 1.32
HMG20B-212ENST00000487894 BTAF1O14981 1849 aa23.3■■□□□ 1.32
HMG20B-212ENST00000487894 KAT6BQ8WYB5 2073 aa23.29■■□□□ 1.32
HMG20B-212ENST00000487894 NPC1L1Q9UHC9 1359 aa23.28■■□□□ 1.32
HMG20B-212ENST00000487894 EN1Q05925 392 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms